Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PCDH7 Gene 0 3.77 1.35 1.79 3.61 17.16 1.69 11.96 20.45 101.03 42.67 0.42 0.17 0.23 1.25 0.78 0.00 26.85 7.13 0.16 41.59 34.04 108.34 55.59 2 361762 Transcript 0 0.60 0.10 0.23 1.89 3.91 0.26 6.95 6.48 20.79 12.93 0.13 0.04 0.00 0.47 0.47 0.00 20.79 1.93 0.09 15.56 14.73 53.81 22.71 3 333135 Transcript 0 7.58 2.67 0.88 3.87 22.06 1.49 10.84 17.17 97.37 39.63 0.00 0.10 0.00 0.00 0.00 0.00 3.54 2.71 0.25 30.72 20.06 52.99 17.49 4 ER1a ExonRegion 0 0.53 0.41 0.37 0.72 2.86 0.19 4.40 7.77 31.95 18.78 0.10 0.15 0.00 0.75 0.21 0.00 16.91 4.30 0.00 21.60 22.82 51.21 31.00 5 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 12.99 0.00 3.93 2.42 52.40 20.95 0.00 0.00 0.00 0.00 0.00 0.00 30.20 4.31 0.00 3.20 28.17 73.36 33.12 6 ER1b ExonRegion 0 0.00 0.00 0.38 0.87 1.53 0.32 2.10 5.32 46.10 25.71 0.50 0.00 0.00 1.05 0.66 0.00 21.00 7.64 0.00 25.62 29.83 46.12 37.88 7 E1_Da KnownBoundary 0 0.00 0.00 1.36 1.83 0.00 2.90 1.90 13.51 47.34 23.72 0.00 0.00 0.00 2.24 0.00 0.00 17.67 6.22 0.00 23.52 42.13 12.37 31.24 8 E1a_E1c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1c ExonRegion 0 0.00 0.00 0.54 0.25 2.39 0.84 3.00 7.85 37.21 17.86 0.00 0.00 0.00 0.29 0.74 0.00 21.01 2.54 0.00 26.01 25.20 33.95 23.29 10 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 4.33 0.00 4.02 11.62 73.26 39.11 0.00 0.00 0.00 0.00 0.00 0.00 22.16 7.46 0.00 29.59 43.74 43.17 27.57 11 ER1d ExonRegion 0 4.14 1.84 3.24 5.13 26.90 3.09 18.82 33.85 162.01 65.10 0.66 0.24 0.53 2.02 1.25 0.00 41.84 10.52 0.14 65.02 49.16 177.42 90.57 12 E1b_E2a KnownJunction 0 0.00 0.00 0.00 3.43 4.33 0.00 10.20 7.15 3.53 8.70 0.00 0.00 0.00 0.00 0.00 0.00 30.48 0.00 0.00 6.20 8.46 71.28 21.85 13 E1b_E3a KnownJunction 0 6.15 2.96 0.00 1.66 30.90 2.56 20.45 27.93 173.46 66.35 0.00 0.00 0.00 0.00 0.00 0.00 4.30 4.68 0.00 66.54 28.05 78.20 19.72 14 E2_Aa NovelBoundary 0 0.00 0.00 0.00 3.90 0.00 0.00 17.58 7.11 4.31 1.34 0.00 0.00 0.00 0.00 5.19 0.00 0.00 0.00 0.00 6.01 0.00 8.21 0.00 15 ER2a ExonRegion 0 1.86 0.00 0.00 3.17 6.05 0.00 10.19 3.16 10.49 6.40 0.42 0.00 0.00 0.84 0.94 0.00 14.74 0.88 0.35 8.42 2.44 58.81 14.70 16 E2_Da NovelBoundary 0 7.04 0.00 0.00 2.06 0.00 0.00 21.99 6.53 12.62 7.95 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 3.26 0.00 21.62 0.00 17 I2_AR2 ActiveIntronRegion 0 0.00 1.23 0.00 1.17 3.25 0.00 0.80 0.00 9.32 1.15 0.00 0.00 0.00 0.81 0.00 0.00 2.00 0.00 0.00 4.64 0.00 21.85 0.17 18 I2_AR11 ActiveIntronRegion 0 10.49 3.53 0.00 5.87 21.43 0.25 9.61 12.76 26.15 15.73 0.00 0.00 0.00 0.00 0.00 0.00 2.23 0.00 0.43 2.01 0.00 0.85 3.97 19 I2_AR16 ActiveIntronRegion 0 3.39 0.00 2.33 1.36 9.90 0.00 5.56 9.16 17.17 4.59 0.00 0.00 0.00 0.00 0.00 0.00 0.66 0.00 0.00 6.81 0.00 20.84 11.75 20 I2_AR17 ActiveIntronRegion 0 2.12 0.00 0.16 2.63 5.35 0.00 4.50 8.64 12.60 4.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.51 0.00 23.75 11.75 21 I2_AR18 ActiveIntronRegion 0 1.09 0.67 0.67 1.87 6.35 0.13 8.09 9.28 20.35 8.63 0.00 0.00 0.57 0.00 0.00 0.00 1.70 0.00 0.00 6.27 0.49 15.00 2.86 22 I2_AR23 ActiveIntronRegion 0 4.85 2.35 0.91 3.61 37.37 0.00 12.71 11.80 22.02 14.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.29 0.00 2.63 0.00 0.00 1.85 23 ER3a ExonRegion 0 8.65 2.25 1.93 8.23 25.52 2.91 11.32 22.10 136.09 62.53 0.00 0.00 0.00 0.00 0.00 0.00 4.10 1.49 0.84 45.07 30.79 76.60 38.36 24 E3_Da NovelBoundary 0 0.00 3.35 0.00 19.78 22.92 0.00 15.81 14.46 113.95 40.08 0.00 0.00 0.00 0.00 0.00 0.00 4.39 6.43 0.00 24.10 35.89 68.77 26.46 25 E3a_E4a KnownJunction 0 3.78 2.63 0.00 1.93 8.66 0.00 4.50 4.27 21.59 16.76 0.00 0.00 0.00 0.00 0.00 0.00 3.93 1.62 0.00 7.99 14.64 24.31 7.68 26 ER4a ExonRegion 0 19.32 5.53 2.47 7.52 45.20 1.98 17.93 31.53 155.71 52.49 0.00 0.48 0.00 0.00 0.00 0.00 5.36 5.78 0.43 34.00 26.81 85.83 21.69 27 IG4_AR1 ActiveIntergenicRegion 0 11.50 6.56 3.50 14.82 80.94 5.77 33.62 51.83 191.20 70.46 0.00 0.10 0.00 0.04 0.17 0.00 2.62 1.65 0.13 31.62 6.42 110.03 23.84 28 IG4_AR2 ActiveIntergenicRegion 0 0.00 1.69 0.00 0.00 0.00 0.00 7.94 1.73 14.00 3.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00