Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LDB2 Gene 0 125.09 22.35 82.31 83.32 97.09 22.20 38.43 75.61 122.37 45.91 0.44 0.54 0.00 0.05 0.00 0.00 0.00 1.94 14.65 11.73 608.53 150.76 198.02 2 304510 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 441778 Transcript 0 54.31 3.26 25.41 32.47 24.54 2.16 10.93 38.13 23.77 15.13 0.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.10 2.47 365.70 96.38 125.43 4 304523 Transcript 0 8.92 2.69 24.20 23.18 11.35 0.00 4.02 28.71 45.18 19.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 6.78 5.82 101.99 51.62 84.25 5 ER1a ExonRegion 0 6.61 2.12 0.00 0.00 1.39 0.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.29 6.51 9.17 6 E1_Ab KnownBoundary 0 6.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 7 ER1b ExonRegion 0 44.38 9.02 43.15 36.77 35.25 13.10 17.06 32.51 81.93 26.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 15.15 13.57 703.29 106.76 231.74 8 E1a_E2a KnownJunction 0 90.61 25.92 67.06 103.58 101.87 17.77 38.02 80.96 157.20 47.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.65 14.31 5.82 736.02 182.23 248.24 9 I1_AR2 ActiveIntronRegion 0 33.52 1.61 22.27 11.57 15.26 0.87 9.44 15.50 8.75 7.58 0.31 2.10 0.00 0.00 0.00 0.00 0.00 0.44 1.01 2.70 11.87 0.99 12.56 10 I1_SR2 SilentIntronRegion 0 27.90 2.70 17.70 16.48 14.28 0.43 6.27 20.49 13.72 6.01 1.12 0.41 0.00 0.00 0.00 0.00 0.00 0.29 1.48 5.99 22.44 4.35 16.65 11 I1_AR3 ActiveIntronRegion 0 24.84 3.64 20.10 18.01 8.89 1.13 5.08 22.65 20.11 8.36 1.43 1.32 0.00 1.06 0.00 0.00 0.00 1.50 4.71 6.22 59.18 3.34 30.79 12 ER2a ExonRegion 0 50.41 24.40 52.67 55.00 106.17 35.59 45.26 54.40 112.72 40.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.28 21.71 9.25 816.74 167.55 232.99 13 E2a_E3a KnownJunction 0 54.16 26.64 58.42 46.58 65.20 22.66 25.97 60.91 90.77 31.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.93 12.80 14.32 746.76 157.31 115.33 14 I2_AR6 ActiveIntronRegion 0 23.00 0.40 22.83 20.31 5.97 2.95 6.59 8.03 15.73 11.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.74 26.42 1.85 28.97 15 I2_AR9 ActiveIntronRegion 0 33.46 0.00 26.08 12.27 3.57 0.00 9.77 1.73 17.00 3.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 3.19 2.53 15.32 0.00 16.36 16 I2_AR23 ActiveIntronRegion 0 63.06 1.20 2.03 1.72 5.84 0.00 1.49 0.11 0.00 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.48 0.00 8.69 17 ER3a ExonRegion 0 74.40 19.11 65.02 68.62 54.13 15.52 21.31 62.49 124.70 44.68 0.00 1.05 0.00 0.08 0.00 0.00 0.00 2.92 13.20 16.94 895.06 149.12 202.19 18 E3a_E4a KnownJunction 0 69.86 17.96 88.11 74.58 83.70 5.39 31.66 82.68 177.02 39.06 0.00 0.00 0.00 2.35 0.00 0.00 0.00 7.59 17.04 18.02 997.09 237.95 219.30 19 ER4a ExonRegion 0 82.06 12.20 108.56 98.34 56.02 18.02 26.30 87.24 178.42 62.59 0.28 1.48 0.00 0.44 0.00 0.00 0.00 11.15 16.78 25.62 1158.54 199.54 347.10 20 E4a_E5a KnownJunction 0 139.95 17.96 147.98 123.29 63.16 22.03 24.38 100.34 202.37 65.92 2.58 0.00 0.00 0.00 0.00 0.00 0.00 5.97 34.73 24.93 1215.04 184.07 376.79 21 E4a_E6a NovelJunction 0 0.00 0.00 1.80 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.66 3.00 0.00 22 ER5a ExonRegion 0 80.48 32.32 143.12 124.93 57.02 34.78 22.82 93.19 208.34 65.10 1.79 2.16 0.00 0.81 0.00 0.00 0.00 6.91 25.79 19.68 1169.72 210.91 327.61 23 E5a_E6a KnownJunction 0 98.83 18.75 137.61 125.69 68.51 20.84 30.07 94.47 181.80 66.08 1.95 0.00 0.00 0.00 0.00 0.00 0.00 11.61 22.02 14.57 1196.75 199.74 253.27 24 ER6a ExonRegion 0 82.83 21.43 126.56 105.59 63.18 13.27 25.29 80.19 181.37 59.12 0.89 0.00 0.00 0.00 0.00 0.00 0.00 6.96 20.40 13.38 1122.38 171.39 305.10 25 E6a_E7a KnownJunction 0 99.57 34.20 145.26 103.05 39.98 2.78 36.39 91.92 190.16 79.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.69 35.20 14.19 916.96 151.19 348.71 26 ER7a ExonRegion 0 82.93 19.85 100.35 98.59 61.96 18.60 33.45 85.32 157.88 58.76 0.00 1.20 0.00 0.00 0.00 0.00 0.00 3.11 31.81 13.34 1027.84 168.39 280.33 27 E7_Da NovelBoundary 0 2.89 0.00 3.22 3.30 7.30 21.46 7.64 9.04 3.12 1.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.08 0.00 100.14 21.25 26.55 28 E7a_E8a KnownJunction 0 16.30 0.00 14.22 18.88 34.55 8.57 15.37 18.52 24.02 13.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 223.57 27.07 68.03 29 E7a_E9a KnownJunction 0 7.26 3.35 46.78 44.08 20.03 0.00 6.27 56.85 89.12 36.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.20 13.55 11.63 203.99 101.16 164.58 30 I7_AR2 ActiveIntronRegion 0 9.33 1.01 5.43 4.30 7.86 2.12 7.05 5.08 16.17 5.16 0.65 0.00 0.00 0.00 0.00 0.00 0.00 0.69 0.79 0.65 149.00 20.40 40.44 31 ER8a ExonRegion 0 41.75 5.25 27.31 23.17 39.60 12.10 13.37 31.42 40.19 18.55 0.66 0.00 0.00 0.00 0.00 0.00 0.00 0.90 3.94 0.79 598.04 77.09 93.13 32 E8_Da KnownBoundary 0 60.08 9.67 28.53 27.77 40.24 2.50 14.57 39.02 28.93 22.67 2.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.47 2.75 575.89 123.88 103.46 33 ER8b ExonRegion 0 44.84 3.16 26.96 29.84 20.14 2.17 11.36 34.21 23.79 16.30 0.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.20 1.74 426.65 102.31 121.02 34 E8b_E9a KnownJunction 0 63.79 3.35 23.86 35.09 28.95 2.16 10.51 42.06 23.76 13.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 304.75 90.44 129.84 35 I8 Intron 0 21.59 2.20 6.42 11.42 14.81 5.02 9.52 11.84 15.59 7.92 0.14 0.26 0.00 0.05 0.00 0.00 0.00 0.31 1.95 1.27 114.58 29.40 46.10 36 I8_AR1 ActiveIntronRegion 0 21.60 2.20 6.42 11.43 14.82 5.03 9.53 11.84 15.60 7.92 0.14 0.26 0.00 0.05 0.00 0.00 0.00 0.31 1.95 1.27 114.66 29.42 46.13 37 E9_Aa NovelBoundary 0 49.79 3.22 23.24 42.45 19.69 8.46 14.79 24.73 30.87 19.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 0.00 2.94 163.22 74.64 66.67 38 ER9a ExonRegion 0 192.12 30.23 96.88 104.43 145.76 28.25 55.32 96.98 131.88 52.59 0.59 0.55 0.00 0.00 0.00 0.00 0.00 0.35 12.97 10.68 400.12 167.17 169.37 39 ER9b ExonRegion 0 10.58 2.03 1.63 2.27 2.68 0.00 1.77 0.58 1.24 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 3.92 40 IG4_AR9 ActiveIntergenicRegion 0 11.26 0.73 3.73 1.89 23.73 4.03 2.87 4.28 3.98 3.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.87 7.20 1.28 0.00 0.25 0.00 41 IG4_AR4 ActiveIntergenicRegion 0 9.15 2.14 9.01 15.80 23.35 1.38 2.99 1.94 4.71 5.14 0.00 0.00 0.58 0.00 0.62 0.82 0.00 0.83 3.35 0.64 0.00 0.00 0.00 42 IG4_SR2 SilentIntergenicRegion 0 5.53 5.95 4.77 6.42 9.59 2.26 4.73 10.25 14.01 21.76 0.09 3.24 3.34 0.83 0.97 1.52 2.57 2.83 6.52 3.04 1.47 0.24 0.41 43 IG4_AR2 ActiveIntergenicRegion 0 38.05 8.52 7.74 12.22 28.91 10.37 9.10 7.51 16.81 20.03 1.72 6.67 4.47 3.74 4.89 7.10 6.11 3.54 6.20 4.80 2.67 2.35 0.87 44 IG4_SR1 SilentIntergenicRegion 0 18.41 5.71 3.39 7.65 19.96 11.24 8.77 5.69 10.72 16.89 0.41 7.09 7.63 4.39 2.32 3.28 5.64 1.57 8.27 5.07 1.19 2.49 0.63 45 IG4_AR1 ActiveIntergenicRegion 0 36.60 4.24 6.13 13.05 18.35 14.91 9.46 13.52 17.83 22.99 5.64 4.91 7.74 11.62 7.32 22.83 17.33 7.96 16.78 5.70 6.79 2.60 5.14