Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZCCHC4 Gene 0 31.66 49.78 29.94 50.76 44.74 37.01 38.66 17.27 19.28 30.89 48.27 62.48 45.51 50.43 38.34 48.45 56.34 32.91 26.12 42.52 35.79 40.15 39.96 2 302874 Transcript 1 6.51 58.26 12.40 31.74 27.20 51.90 47.77 8.65 15.72 25.19 62.38 68.43 35.07 65.85 21.86 37.51 75.53 34.70 25.50 34.02 63.43 31.47 43.48 3 450254 Transcript 0 0.00 0.00 0.16 0.09 0.00 0.00 0.18 0.00 0.00 0.15 0.39 0.00 0.00 0.00 0.00 0.20 0.00 0.00 0.21 0.00 0.15 0.14 0.20 4 IG34_AR1 ActiveIntergenicRegion 0 10.26 7.90 1.77 5.92 10.40 2.67 12.21 3.75 1.79 4.15 5.63 12.12 19.43 19.35 36.67 27.43 11.22 0.00 1.55 1.03 1.07 10.10 8.56 5 ER1a ExonRegion 0 15.23 23.97 5.28 7.16 20.93 27.54 19.70 7.08 7.52 11.12 28.35 5.10 1.15 20.64 17.51 22.61 30.13 26.81 11.39 20.38 30.58 20.91 35.71 6 E1a_E2a KnownJunction 1 0.00 9.80 1.30 10.79 0.00 0.00 1.77 7.06 3.33 11.31 22.95 19.51 13.64 9.95 0.00 3.85 38.90 10.90 4.80 9.78 31.20 0.00 3.24 7 ER2a ExonRegion 0 6.49 13.81 10.90 24.94 20.62 10.97 12.08 7.63 13.17 29.80 63.67 37.47 14.35 60.53 40.45 63.71 63.47 52.39 17.85 39.23 57.76 39.08 58.41 8 E2a_E3a KnownJunction 0 24.97 23.22 16.44 38.89 80.05 44.46 45.58 15.20 12.73 30.68 40.75 79.83 20.29 68.93 17.92 118.17 68.26 91.61 75.86 54.46 56.22 42.43 127.45 9 ER3a ExonRegion 1 9.43 26.44 19.54 30.95 48.09 59.02 46.89 9.47 10.97 24.41 49.43 50.11 23.45 56.56 18.80 51.56 57.30 47.80 29.35 33.73 49.83 24.72 41.11 10 E3_Da NovelBoundary 0 6.22 27.63 13.16 12.72 21.56 23.68 35.99 1.81 7.03 12.95 39.80 22.96 29.38 20.43 9.27 10.17 26.27 16.21 11.01 7.73 33.55 7.23 9.99 11 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E3b_E5a KnownJunction 0 6.67 62.88 11.32 33.83 30.65 55.20 51.36 10.39 16.78 25.87 62.91 68.12 35.55 71.40 25.96 43.07 77.61 35.44 27.11 39.31 62.95 35.33 49.51 13 ER3b ExonRegion 1 6.35 53.64 13.48 29.64 23.75 48.60 44.19 6.91 14.67 24.52 61.85 68.73 34.59 60.30 17.77 31.95 73.44 33.95 23.89 28.72 63.91 27.61 37.44 14 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER4a ExonRegion 0 0.00 0.00 0.49 0.27 0.00 0.00 0.53 0.00 0.00 0.46 1.16 0.00 0.00 0.00 0.00 0.59 0.00 0.00 0.64 0.00 0.44 0.42 0.59 16 ER5a ExonRegion 0 16.99 35.03 21.46 41.68 26.89 28.18 34.69 11.56 20.35 35.89 71.45 78.46 53.56 75.13 27.73 63.63 91.98 37.98 24.22 45.68 74.38 49.31 42.19 17 E5a_E6a KnownJunction 0 20.97 28.42 14.99 48.71 45.76 7.72 35.37 3.86 19.70 42.15 47.75 42.01 87.17 62.75 24.85 49.39 60.31 39.21 20.24 36.24 37.87 37.90 28.26 18 ER6a ExonRegion 0 23.65 28.29 24.11 45.03 38.58 33.37 40.13 16.67 20.19 34.93 59.59 100.54 65.14 85.42 30.34 54.31 86.88 35.72 35.43 50.41 42.74 44.55 51.99 19 E6a_E7a KnownJunction 1 36.97 53.87 27.67 48.84 56.03 17.49 43.72 20.41 22.54 27.59 70.23 29.41 53.73 99.77 23.98 61.61 92.19 30.22 18.54 55.99 28.97 61.97 56.51 20 ER7a ExonRegion 1 35.37 57.16 24.88 43.44 40.03 32.41 48.70 12.19 20.71 27.73 59.10 88.01 53.71 75.33 26.35 54.80 73.98 21.44 9.47 38.09 23.55 52.72 44.45 21 E7_Da NovelBoundary 0 3.33 6.71 2.87 6.83 9.76 5.74 5.83 3.78 7.99 7.41 7.16 24.46 5.84 16.36 4.82 12.13 9.54 6.34 0.00 29.34 8.46 20.33 19.12 22 E7a_E8a KnownJunction 0 17.78 100.25 22.56 29.80 62.14 18.11 48.84 16.76 15.94 18.88 36.38 64.37 34.09 67.81 22.25 36.66 52.36 9.91 17.22 14.13 27.49 34.11 15.54 23 I7 Intron 0 3.03 6.57 2.51 9.20 8.86 9.33 11.02 4.94 3.85 4.17 9.54 18.25 19.87 7.13 3.15 10.01 11.76 6.85 6.35 26.15 11.00 16.54 12.45 24 I7_SR1 SilentIntronRegion 0 3.04 6.62 2.49 9.24 8.90 9.39 11.08 4.96 3.87 4.19 9.58 18.38 19.92 7.18 3.18 10.05 11.78 6.89 6.36 26.26 11.05 16.58 12.53 25 E8_Aa NovelBoundary 0 24.45 38.02 12.06 41.69 10.87 8.35 12.94 9.20 9.20 12.30 41.17 52.67 12.66 7.48 8.90 21.70 13.18 6.43 18.45 31.58 24.96 33.74 14.94 26 I7_AR1 ActiveIntronRegion 0 2.37 0.00 5.77 2.81 3.78 1.73 3.35 1.63 0.00 1.15 4.78 1.27 14.62 0.00 0.00 4.02 10.29 1.74 5.06 11.89 4.54 11.52 1.73 27 ER8a ExonRegion 0 17.53 82.86 35.83 61.35 43.08 43.17 46.90 20.78 19.30 31.37 60.00 120.45 98.27 54.61 31.84 44.72 69.03 25.43 26.37 45.22 33.48 62.80 46.60 28 E8a_E9a KnownJunction 0 50.08 97.22 62.03 108.21 50.68 39.41 62.09 26.00 19.13 33.90 88.86 197.61 87.66 73.52 91.85 104.67 85.65 28.56 44.80 53.69 49.67 138.08 106.79 29 E9_Aa NovelBoundary 0 14.15 15.39 3.02 11.55 0.00 0.00 20.18 2.22 0.00 1.99 0.00 0.00 0.00 0.00 0.00 3.93 0.00 0.00 0.00 11.51 0.00 0.00 0.00 30 ER9a ExonRegion 0 28.19 83.18 41.63 89.87 44.32 31.99 48.75 17.03 22.90 36.39 72.36 149.82 83.31 72.25 46.22 63.47 69.61 32.93 38.13 56.04 37.90 73.25 44.78 31 E9_Da NovelBoundary 1 3.78 28.74 0.00 12.72 3.74 0.00 0.00 10.64 1.79 1.67 0.00 13.35 25.65 0.00 0.00 0.00 3.55 2.03 0.00 21.67 8.90 0.00 0.00 32 E9a_E10a KnownJunction 0 34.75 72.42 36.28 69.69 94.40 46.05 29.94 14.99 16.41 25.60 48.33 51.62 55.35 41.67 20.27 41.87 73.49 16.37 12.05 47.11 23.54 45.01 43.02 33 E10_Aa NovelBoundary 0 6.89 8.35 0.00 14.82 0.00 5.45 10.42 6.37 3.10 2.07 0.00 19.66 0.00 0.00 0.00 4.02 16.36 13.47 8.75 19.62 0.00 2.82 4.35 34 ER10a ExonRegion 0 63.98 114.36 45.31 95.84 78.45 61.31 69.35 24.72 26.99 47.78 68.22 136.52 98.07 78.40 56.41 89.97 85.58 42.60 34.10 79.61 38.13 79.26 69.64 35 E10a_E11a KnownJunction 1 30.67 101.56 35.04 52.54 70.63 54.46 62.67 12.57 26.97 43.38 40.48 121.69 59.90 79.93 56.25 48.36 63.58 25.16 29.84 77.53 27.06 26.21 65.73 36 ER11a ExonRegion 0 22.98 72.49 44.03 58.84 39.29 53.95 52.98 14.15 16.87 34.81 52.16 102.77 93.00 75.29 40.35 51.97 79.92 34.28 43.97 72.62 39.93 46.88 45.87 37 E11a_E12a KnownJunction 0 28.08 99.06 34.89 59.77 40.49 47.13 52.82 23.74 11.49 33.87 59.65 49.22 59.25 73.99 27.81 55.20 47.31 32.75 44.42 71.40 46.27 53.27 46.78 38 ER12a ExonRegion 0 17.54 76.69 31.81 56.64 54.60 54.13 34.83 27.09 14.68 49.25 64.71 61.45 77.11 91.92 52.50 54.30 77.13 39.41 47.47 76.27 50.22 52.81 38.18 39 E12a_E13a KnownJunction 0 24.37 57.23 33.59 53.01 56.62 47.64 16.34 18.24 21.87 59.23 53.86 38.71 19.15 85.94 80.85 39.65 76.67 35.69 21.74 57.78 51.58 58.36 41.40 40 ER13a ExonRegion 0 38.35 54.22 38.73 53.23 54.29 42.37 37.72 15.72 18.45 45.53 45.94 76.71 61.52 65.49 39.66 50.83 56.37 35.91 28.89 52.38 37.98 39.08 44.41 41 E13_Da NovelBoundary 0 5.85 20.65 10.67 30.33 16.64 5.28 16.69 9.94 7.67 16.44 9.48 12.60 6.33 12.30 17.92 15.04 27.58 1.95 29.74 14.51 16.80 17.70 4.18 42 E13a_E14a KnownJunction 0 50.53 39.07 19.13 40.52 58.06 47.93 44.69 6.78 7.00 20.55 43.27 72.47 53.73 72.16 30.90 36.66 34.03 8.25 4.80 37.33 11.24 27.00 19.97 43 I13 Intron 0 7.55 14.58 5.50 21.96 13.20 14.85 14.46 5.72 5.43 8.83 3.36 15.32 12.09 5.87 4.29 5.49 6.35 5.95 2.52 9.80 3.73 7.34 5.01 44 I13_AR1 ActiveIntronRegion 0 8.26 21.95 5.82 20.32 14.76 10.12 13.05 4.48 4.98 7.87 5.17 23.84 20.22 8.53 5.34 5.98 7.84 4.19 2.56 10.62 3.24 11.39 4.13 45 I13_AR2 ActiveIntronRegion 0 2.12 8.32 0.00 11.77 2.68 14.67 15.05 1.73 3.26 10.43 3.69 8.66 9.38 3.25 2.90 5.94 13.50 1.85 5.21 11.61 13.22 4.17 0.00 46 I13_SR2 SilentIntronRegion 0 2.12 9.41 0.10 15.84 4.68 16.58 20.14 1.73 3.71 12.95 4.19 11.36 5.67 3.72 1.09 5.45 18.43 3.08 6.24 14.45 10.93 3.30 0.00 47 I13_AR3 ActiveIntronRegion 0 4.77 11.01 5.24 22.65 11.92 12.47 18.32 5.55 5.08 10.54 2.14 19.05 10.94 4.36 3.17 4.94 7.31 3.18 0.89 10.30 1.91 5.81 4.11 48 I13_SR3 SilentIntronRegion 0 7.73 14.29 5.31 23.29 13.86 16.30 16.31 7.24 5.82 9.61 2.26 12.46 10.48 5.93 2.97 3.61 3.62 3.73 3.19 10.44 2.87 7.64 3.03 49 I13_AR4 ActiveIntronRegion 0 10.32 13.17 7.10 25.68 14.92 21.34 12.99 6.75 6.91 8.98 4.18 9.98 7.78 5.42 6.49 8.37 7.42 13.58 3.10 9.07 6.38 5.08 9.56 50 E14_Aa NovelBoundary 0 30.82 9.60 15.37 27.94 8.32 10.68 12.59 12.36 6.25 6.21 7.11 31.51 13.31 7.83 8.90 0.00 0.00 3.56 4.52 8.95 0.00 2.69 3.41 51 ER14a ExonRegion 0 39.86 46.62 33.00 53.17 50.18 36.88 38.12 20.29 20.87 28.30 37.85 42.14 32.74 35.23 43.00 41.41 41.70 29.95 25.50 36.62 24.91 31.55 33.01 52 IG35_AR1 ActiveIntergenicRegion 0 4.50 12.02 4.35 20.60 19.04 18.13 12.55 4.87 4.63 8.54 2.75 2.92 2.15 3.41 2.07 2.11 3.65 6.61 4.53 11.09 3.02 3.15 5.32 53 IG35_AR2 ActiveIntergenicRegion 0 24.62 52.08 11.81 48.39 32.81 18.83 12.36 14.50 6.66 14.81 4.25 7.37 6.34 2.46 2.04 1.69 3.02 2.83 1.64 9.78 2.02 5.30 1.32