Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C4orf34 Gene 0 99.00 50.36 40.19 61.81 112.64 88.80 61.45 65.42 124.01 74.25 92.78 72.79 320.73 401.27 519.26 75.03 49.78 94.89 37.06 57.99 99.06 181.28 88.06 2 295958 Transcript 1 80.26 29.03 27.05 40.14 76.59 67.98 40.10 36.68 109.51 52.05 120.94 52.77 237.93 436.92 637.63 114.24 66.16 129.19 41.84 61.52 167.60 153.50 122.98 3 IG39_AR1 ActiveIntergenicRegion 0 9.39 0.00 0.00 0.74 0.46 0.99 0.00 0.00 1.00 1.85 4.07 0.00 0.00 7.53 17.41 6.45 1.79 1.00 3.32 1.15 11.79 1.13 3.19 4 ER1a ExonRegion 0 16.52 9.47 11.08 3.53 11.43 43.34 13.90 6.79 28.99 18.89 12.53 0.00 5.54 25.34 51.79 12.87 8.94 6.74 5.67 17.91 66.58 54.37 33.35 5 E1a_E2a KnownJunction 0 17.26 12.17 13.16 1.60 20.20 18.68 14.84 8.17 31.22 14.32 22.01 0.00 13.15 54.39 84.93 37.77 12.53 11.90 9.41 28.06 128.06 51.37 59.67 6 ER2a ExonRegion 1 52.53 22.78 31.84 38.58 69.81 51.76 29.05 32.15 103.50 63.54 216.24 26.65 141.81 695.23 1041.92 159.28 106.35 133.49 50.73 77.89 226.30 194.88 138.10 7 E2_Da NovelBoundary 0 9.56 0.00 12.60 22.84 4.33 5.45 5.48 4.07 10.73 5.24 7.79 0.00 6.82 14.48 48.58 20.76 4.11 13.89 13.55 6.14 2.35 6.00 11.01 8 E2a_E3a KnownJunction 1 22.30 8.75 14.75 42.69 36.33 45.09 14.09 31.30 117.27 68.98 85.97 11.55 133.60 255.52 781.01 200.97 45.35 244.66 54.68 88.14 103.72 208.19 221.26 9 E3_Aa NovelBoundary 0 13.41 0.00 13.36 14.65 0.00 0.00 3.97 9.20 10.33 11.39 0.00 11.70 6.82 0.00 4.33 6.92 0.00 4.35 4.52 6.46 6.12 2.39 7.77 10 ER3a ExonRegion 0 20.34 6.27 28.76 40.19 61.65 57.86 17.29 34.85 125.10 55.07 114.79 73.16 347.35 364.23 573.56 114.28 55.98 176.48 29.90 60.66 124.94 99.46 131.31 11 E3a_E4a KnownJunction 0 32.52 11.91 32.46 44.25 110.27 89.27 38.47 39.68 124.07 43.27 171.04 106.68 437.63 668.97 771.13 106.13 88.45 160.22 55.91 58.16 221.90 131.16 128.22 12 I3_AR1 ActiveIntronRegion 0 28.33 15.89 3.69 25.62 16.11 9.19 12.70 8.40 9.83 14.69 0.94 4.78 28.18 3.72 22.72 7.77 1.07 3.02 1.03 7.93 3.08 4.13 5.82 13 I3_AR2 ActiveIntronRegion 0 12.70 5.50 5.52 16.31 36.19 16.95 16.29 12.10 12.23 10.91 2.08 1.91 16.39 4.43 22.45 8.48 0.03 4.28 1.31 4.10 3.22 7.00 7.30 14 E4_Aa NovelBoundary 0 24.82 18.02 3.13 34.16 3.74 0.00 6.18 13.80 10.04 6.47 0.00 0.00 25.97 2.47 5.56 0.00 0.00 1.91 36.61 2.68 8.15 0.00 8.02 15 ER4a ExonRegion 0 129.45 63.07 35.28 61.97 109.78 134.07 83.11 53.41 161.93 66.10 199.82 93.83 327.06 770.85 933.74 135.80 105.72 152.36 63.82 91.74 254.01 233.09 139.23 16 E4_Da NovelBoundary 0 23.26 24.54 4.11 17.51 15.53 2.50 18.37 16.10 4.72 7.52 0.00 6.30 35.22 2.30 24.35 0.00 3.65 2.07 8.75 6.26 5.99 6.06 8.02 17 E4a_E5a KnownJunction 0 318.43 68.67 30.54 56.50 138.46 77.97 80.69 45.55 160.27 54.50 187.36 79.53 361.18 716.70 1019.10 194.31 128.94 184.26 69.46 73.82 309.88 215.79 172.77 18 ER5a ExonRegion 0 112.98 58.17 45.57 71.96 131.37 93.76 69.49 78.25 133.27 83.78 78.69 83.50 374.05 381.09 481.51 66.79 43.19 92.64 36.97 57.24 73.03 193.16 82.87 19 IG38 Intergenic 0 40.15 41.51 15.56 41.74 53.07 40.65 26.70 24.61 45.24 29.13 9.57 24.24 93.67 51.89 78.78 11.44 6.77 15.24 15.43 17.41 11.87 54.91 21.31 20 IG38_AR7 ActiveIntergenicRegion 0 69.35 78.28 16.09 51.33 107.46 80.89 54.31 42.78 104.40 47.51 27.40 52.06 296.27 168.85 180.05 38.24 14.38 29.63 26.46 31.57 36.14 171.78 65.29 21 IG38_SR7 SilentIntergenicRegion 0 2.76 5.25 0.00 3.93 6.91 10.65 4.29 5.01 9.52 0.00 14.97 6.91 9.97 25.25 73.71 15.35 4.26 9.52 14.39 9.61 7.11 67.36 47.40 22 IG38_AR5 ActiveIntergenicRegion 0 89.86 63.55 19.03 50.02 94.87 63.64 44.44 42.94 73.32 37.23 12.74 32.65 141.53 79.60 162.39 10.63 9.63 12.39 13.46 23.40 14.43 90.96 26.23 23 IG38_SR5 SilentIntergenicRegion 0 13.76 16.64 12.66 40.01 22.49 18.73 10.49 10.39 21.37 19.43 2.00 8.43 12.13 4.32 11.84 2.90 1.42 5.71 7.53 6.72 0.63 4.30 3.54 24 IG38_AR4 ActiveIntergenicRegion 0 10.00 21.78 19.09 27.90 22.92 19.18 13.27 12.33 23.42 22.38 3.08 15.32 20.20 5.01 3.17 2.40 2.83 5.73 6.63 9.74 3.24 5.07 2.63 25 IG38_SR4 SilentIntergenicRegion 0 11.81 40.78 6.95 23.70 21.73 17.68 10.75 7.84 10.27 17.78 0.98 7.24 15.14 6.54 5.59 2.26 0.00 9.55 5.66 9.18 1.68 3.70 9.69 26 IG38_SR3 SilentIntergenicRegion 0 10.34 37.94 18.98 55.94 28.05 26.88 19.76 22.20 23.39 27.79 2.92 23.92 36.99 6.60 10.33 7.39 6.16 15.76 23.77 13.61 4.89 8.52 8.35 27 IG38_SR2 SilentIntergenicRegion 0 1.98 21.74 15.18 42.42 14.40 13.12 10.27 7.74 8.53 19.57 4.23 19.86 20.89 6.57 6.37 4.42 3.71 12.22 8.80 12.85 0.93 3.53 3.51 28 IG38_AR1 ActiveIntergenicRegion 0 3.85 11.57 12.20 18.86 7.49 23.22 4.73 7.82 8.96 22.22 4.97 5.02 3.19 15.88 18.43 7.94 5.81 32.31 29.83 16.23 15.69 6.62 15.98