Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DGKQ Gene 0 32.14 11.89 41.24 23.62 12.52 34.16 6.30 13.68 41.93 6.20 43.13 4.90 7.16 40.38 43.80 20.41 19.23 33.04 14.07 23.73 51.17 50.07 61.34 2 405681 Transcript 0 0.00 0.00 3.43 0.14 0.00 2.64 0.00 0.52 1.22 1.72 3.58 0.00 0.00 0.97 0.87 0.89 1.98 3.80 0.00 0.85 3.40 0.63 1.96 3 273814 Transcript 0 5.85 3.44 5.92 1.54 0.45 9.83 2.31 2.10 12.45 1.05 13.83 3.49 0.00 23.00 11.09 8.20 5.19 5.27 2.60 9.61 16.38 3.59 17.33 4 ER1a ExonRegion 0 0.67 1.72 3.90 0.95 0.79 3.08 0.19 1.58 3.68 0.47 6.92 0.21 0.00 7.16 4.15 2.86 2.53 4.54 3.32 4.62 14.91 5.65 5.67 5 E1a_E2a KnownJunction 0 2.89 6.38 12.15 7.86 0.00 19.42 0.00 9.65 24.62 1.18 26.48 6.30 0.00 36.20 22.25 4.36 12.53 22.84 0.00 17.64 39.78 32.45 21.85 6 ER2a ExonRegion 0 2.57 4.91 20.63 10.24 0.10 13.57 1.72 14.89 29.33 3.91 43.42 10.34 7.39 28.40 28.07 17.13 15.64 24.46 17.12 22.13 40.08 43.34 39.46 7 E2a_E3a KnownJunction 0 0.00 3.35 25.84 10.09 0.00 0.00 0.00 15.28 32.87 4.22 54.12 7.65 0.00 27.72 30.29 42.04 14.31 16.04 11.67 26.97 52.20 42.01 23.65 8 E3_Aa NovelBoundary 0 7.19 0.00 5.09 0.00 7.81 2.67 0.00 8.71 4.89 1.34 2.16 0.00 0.00 0.00 8.90 4.36 14.31 6.14 0.00 3.13 0.00 0.00 0.00 9 ER3a ExonRegion 0 1.02 2.58 26.39 10.39 8.19 7.24 2.03 14.88 27.70 4.03 30.15 2.90 0.00 32.08 27.10 11.80 18.29 27.31 11.95 20.45 48.31 34.50 30.01 10 E3a_E4a KnownJunction 0 0.00 0.00 29.24 7.19 0.00 24.08 0.00 16.18 34.06 4.11 39.54 0.00 5.68 48.56 39.68 16.32 17.11 30.26 9.60 14.89 43.37 33.56 23.82 11 E4_Aa NovelBoundary 0 0.00 0.00 14.07 1.60 0.00 2.73 4.28 4.60 4.77 0.00 0.00 0.00 0.00 0.00 4.94 4.27 0.00 1.99 0.00 3.26 0.00 0.00 0.00 12 ER4a ExonRegion 0 2.14 1.66 28.84 8.83 3.08 14.20 0.00 11.92 27.95 2.29 32.59 7.45 3.22 28.50 37.01 9.61 20.88 15.62 7.07 17.91 47.46 36.85 23.90 13 E4a_E5a KnownJunction 0 6.59 5.85 21.55 20.61 0.00 20.16 0.00 6.04 32.70 1.42 31.80 5.55 13.47 18.36 24.11 18.71 26.18 24.95 21.18 21.35 47.57 38.27 29.54 14 ER5a ExonRegion 0 4.00 4.29 25.78 6.09 5.08 15.92 2.18 6.45 21.95 3.05 31.14 3.71 0.93 24.58 23.16 9.98 17.66 35.49 6.35 17.63 39.95 24.08 27.06 15 E5a_E6a KnownJunction 1 7.48 11.64 26.58 3.83 3.65 7.78 0.00 7.76 31.57 1.48 28.27 0.00 0.00 27.19 28.56 0.00 31.04 41.37 13.27 15.34 32.80 14.45 39.01 16 ER6a ExonRegion 0 3.76 3.34 14.25 6.83 3.92 11.97 2.11 2.48 17.33 4.81 29.56 1.52 1.33 28.10 14.62 10.88 11.24 24.36 6.48 15.78 38.64 19.54 28.87 17 E6a_E7a KnownJunction 0 11.19 6.25 7.95 1.90 0.00 15.45 4.28 2.55 18.40 1.42 22.16 6.15 0.00 30.84 17.80 12.22 8.42 9.95 4.61 15.34 25.64 6.25 24.58 18 E6b_E7b KnownJunction 0 0.00 0.00 4.91 0.00 0.00 5.28 0.00 0.00 2.43 0.00 7.16 0.00 0.00 0.00 0.00 0.00 0.00 4.27 0.00 0.00 2.84 0.00 3.93 19 ER6b ExonRegion 0 0.00 0.00 1.96 0.27 0.00 0.00 0.00 1.04 0.00 3.44 0.00 0.00 0.00 1.95 1.74 1.78 3.96 3.33 0.00 1.70 3.97 1.25 0.00 20 ER7a ExonRegion 0 6.35 4.07 9.80 2.73 1.34 14.06 2.65 3.74 17.70 1.72 19.33 4.33 0.00 38.17 15.47 12.38 7.15 5.85 3.19 13.48 23.51 4.51 27.41 21 ER7b ExonRegion 0 1.75 4.39 15.98 5.43 4.03 19.51 4.32 8.09 22.54 2.24 22.55 5.84 0.00 41.59 23.17 14.47 18.08 22.33 8.68 13.38 39.73 16.06 40.69 22 E7a_E8a KnownJunction 0 3.63 3.35 27.70 10.92 0.00 18.34 6.40 6.98 29.02 0.00 45.27 7.65 0.00 41.03 24.48 15.89 26.93 43.82 20.52 14.89 60.67 19.10 58.39 23 ER8a ExonRegion 0 4.53 3.50 21.41 9.34 6.01 16.27 3.59 8.20 37.37 0.64 33.84 6.00 1.95 28.72 25.08 8.86 17.16 35.77 14.79 20.48 54.46 29.75 43.24 24 E8a_E9a KnownJunction 0 3.04 2.57 29.04 11.45 8.57 12.21 2.08 8.38 34.69 1.40 26.53 0.00 0.00 24.19 23.36 15.21 8.32 34.74 17.41 8.25 31.01 25.66 54.21 25 ER9a ExonRegion 0 4.81 4.14 27.16 10.85 4.90 16.43 4.73 9.91 32.60 3.48 30.36 3.79 1.51 36.33 25.82 13.81 21.99 26.82 14.59 16.40 44.57 33.73 62.61 26 E9a_E10a KnownJunction 0 3.78 12.04 45.44 23.77 7.56 35.38 5.65 17.99 50.87 2.95 55.17 7.05 0.00 64.69 39.56 16.66 13.18 50.66 12.52 34.96 50.66 31.23 150.41 27 ER10a ExonRegion 0 10.84 4.51 21.91 11.16 7.26 22.63 6.46 6.36 41.04 2.10 33.71 0.00 2.47 39.41 25.22 17.21 17.74 22.92 6.51 18.40 39.01 51.84 53.15 28 E10a_E11a KnownJunction 0 3.19 9.21 18.21 11.99 8.23 12.89 3.40 8.01 31.34 1.18 13.74 0.00 0.00 18.31 47.72 19.40 12.25 7.59 3.58 14.70 31.07 55.97 37.99 29 ER11a ExonRegion 0 7.58 6.58 27.07 14.82 4.57 19.70 0.58 8.89 26.86 1.15 26.18 0.00 1.96 26.69 26.01 17.02 20.59 15.39 4.52 18.49 47.40 47.47 53.34 30 E11a_E12a KnownJunction 0 3.48 8.62 41.72 19.44 11.97 22.09 1.77 18.65 31.08 0.00 37.75 0.00 6.82 17.25 24.60 16.75 22.07 36.44 4.80 17.51 43.86 60.01 49.51 31 ER12a ExonRegion 0 3.52 2.23 20.71 10.44 10.57 9.11 3.10 12.80 23.41 1.13 32.86 0.00 7.64 29.84 37.39 10.11 19.97 16.60 13.82 19.66 40.66 45.64 36.90 32 E12_Da NovelBoundary 0 6.30 0.00 11.32 4.13 0.00 7.67 4.24 3.74 1.45 6.23 0.00 0.00 0.00 9.59 4.45 0.00 0.00 17.91 0.00 6.52 3.15 0.00 0.00 33 E12a_E13a KnownJunction 0 3.48 0.00 22.68 10.39 7.47 17.66 0.00 12.12 32.38 2.69 30.32 0.00 0.00 23.90 25.96 3.85 12.90 27.40 3.86 5.69 24.96 30.74 49.25 34 I12 Intron 0 3.90 1.61 12.51 5.09 1.76 7.50 4.01 2.04 8.25 4.50 9.68 0.00 0.00 9.88 10.82 4.31 4.79 6.42 3.78 8.13 9.58 10.71 11.60 35 I12_SR1 SilentIntronRegion 0 3.93 1.62 12.58 5.11 1.77 7.54 4.03 2.05 8.29 4.53 9.73 0.00 0.00 9.93 10.87 4.33 4.81 6.45 3.80 8.17 9.63 10.76 11.66 36 E13_Aa NovelBoundary 0 3.78 0.00 16.32 10.55 15.62 11.02 3.75 2.22 17.07 8.60 4.84 0.00 6.49 11.65 13.35 4.27 0.00 8.66 0.00 11.44 3.15 16.90 11.87 37 ER13a ExonRegion 0 7.46 3.72 25.87 8.89 5.56 19.43 4.69 10.79 31.49 2.24 32.94 2.95 4.69 25.86 26.21 18.23 21.42 20.66 9.30 21.32 38.79 42.44 40.94 38 E13_Da NovelBoundary 0 8.59 0.00 15.05 3.13 0.00 18.85 2.21 12.36 23.35 5.80 2.42 0.00 0.00 9.36 9.64 12.13 4.39 17.82 0.00 12.46 18.10 8.21 4.35 39 E13a_E14a KnownJunction 0 3.48 3.35 18.10 7.86 11.04 0.00 2.08 1.85 18.72 1.48 41.38 5.40 6.82 9.71 39.31 10.85 12.72 18.49 21.27 18.15 43.06 56.15 29.62 40 I13 Intron 0 4.61 2.08 13.57 9.89 2.74 10.34 3.90 3.96 16.75 3.07 10.90 0.00 0.99 10.66 14.89 6.86 4.23 8.24 5.71 9.27 16.08 9.34 15.05 41 I13_SR1 SilentIntronRegion 0 4.63 2.10 13.64 9.94 2.76 10.39 3.92 3.98 16.83 3.08 10.95 0.00 0.99 10.72 14.97 6.89 4.25 8.28 5.73 9.32 16.16 9.39 15.13 42 E14_Aa NovelBoundary 0 7.11 0.00 12.36 6.06 12.31 10.39 4.24 9.41 12.62 4.22 14.53 0.00 0.00 14.36 4.45 7.52 12.81 3.36 13.46 6.26 13.65 11.94 12.89 43 ER14a ExonRegion 0 4.61 1.56 22.87 9.26 2.81 7.52 3.87 7.89 27.55 0.97 48.07 5.77 10.70 31.52 26.71 9.53 13.46 15.54 13.64 32.02 42.77 46.26 51.88 44 E14_Da NovelBoundary 0 6.89 0.00 4.88 6.73 0.00 2.90 4.50 9.00 6.42 2.39 7.37 0.00 0.00 2.30 9.77 3.76 0.00 9.12 13.46 3.26 20.63 14.39 17.16 45 E14a_E15a KnownJunction 0 15.48 0.00 25.81 14.92 8.32 20.78 3.36 11.13 34.23 0.00 52.54 6.30 8.28 34.14 39.31 19.14 17.11 22.97 3.86 54.20 44.67 46.05 90.40 46 I14 Intron 0 1.63 1.56 7.02 4.68 4.80 7.99 3.05 3.30 7.08 2.63 3.47 0.00 0.99 4.14 6.95 3.05 2.54 7.31 3.27 4.36 11.86 5.87 10.54 47 I14_SR1 SilentIntronRegion 0 1.64 1.58 7.08 4.73 4.85 8.07 3.08 3.33 7.14 2.65 3.50 0.00 0.98 4.18 7.02 3.08 2.56 7.38 3.30 4.41 11.98 5.93 10.64 48 ER15a ExonRegion 0 7.79 6.15 25.19 8.20 8.00 14.65 3.82 8.05 38.40 0.98 33.69 3.96 4.81 31.01 34.56 12.86 15.68 16.95 10.85 21.26 40.10 40.74 40.63 49 E15_Da NovelBoundary 0 18.74 6.51 31.90 8.16 4.16 13.63 2.16 4.11 19.27 11.31 25.27 0.00 0.00 14.95 19.28 10.85 8.70 32.25 13.46 2.68 23.48 12.25 33.72 50 E15a_E16a KnownJunction 0 3.11 10.00 16.11 2.06 0.00 10.51 1.81 6.94 34.95 2.66 35.17 0.00 19.80 34.26 14.09 8.46 12.16 15.05 8.66 3.26 47.38 26.64 51.22 51 I15 Intron 0 7.59 2.88 20.06 7.14 4.84 14.35 2.87 6.35 14.71 3.99 16.46 2.50 3.40 16.39 17.10 12.02 5.32 18.79 7.33 9.72 17.54 14.32 18.54 52 I15_AR1 ActiveIntronRegion 0 8.41 3.65 12.56 5.85 4.38 9.69 2.64 4.24 11.21 3.50 13.19 0.63 2.98 13.16 15.64 7.36 7.61 14.77 3.06 9.89 14.44 11.87 14.57 53 I15_SR1 SilentIntronRegion 0 7.31 2.61 22.69 7.60 5.01 15.98 2.96 7.09 15.94 4.17 17.62 3.14 3.55 17.54 17.63 13.65 4.53 20.21 8.83 9.68 18.64 15.19 19.94 54 E16_Aa NovelBoundary 0 15.56 18.29 35.16 13.05 13.07 28.39 6.76 8.17 20.49 0.00 11.11 0.00 0.00 16.78 13.85 15.72 0.00 31.88 8.28 6.14 21.37 6.25 25.69 55 ER16a ExonRegion 0 13.28 10.90 34.13 16.46 4.65 24.50 7.38 9.55 40.22 2.38 50.93 3.25 8.89 55.10 44.42 21.35 19.05 24.94 11.53 21.01 59.37 51.96 69.80 56 E16a_E17a KnownJunction 0 14.82 0.00 40.65 20.71 6.11 34.70 14.66 5.50 23.29 4.59 66.33 5.25 6.66 48.03 26.70 34.78 16.64 29.35 17.51 20.58 69.62 34.47 67.35 57 E16a_E18a NovelJunction 0 0.00 0.00 5.59 4.76 0.00 7.72 0.00 1.60 4.69 0.00 10.06 0.00 0.00 0.00 5.56 0.00 0.00 0.00 0.00 0.00 2.29 5.69 4.35 58 ER17a ExonRegion 0 19.19 2.73 36.36 19.42 8.48 28.87 5.56 8.43 42.42 5.31 52.91 4.88 8.00 56.41 39.90 20.80 23.86 39.83 8.25 15.86 66.64 43.98 67.88 59 E17a_E18a KnownJunction 0 25.34 12.50 37.88 24.21 14.43 42.13 6.71 9.98 44.27 3.68 52.70 0.00 0.00 82.29 49.69 16.06 22.53 49.04 9.32 26.33 56.22 37.47 97.23 60 ER18a ExonRegion 0 22.13 9.60 47.97 31.20 9.88 46.10 5.90 18.02 46.72 9.08 43.47 10.18 3.41 52.32 50.13 22.10 17.37 46.28 16.51 24.91 77.92 45.41 72.02 61 E18a_E19a KnownJunction 0 22.89 8.55 56.03 35.76 25.98 58.09 14.40 21.89 55.03 4.51 45.27 17.71 6.66 62.69 16.56 19.91 29.92 23.17 43.95 14.45 94.46 69.38 72.90 62 E19_Aa NovelBoundary 0 3.11 0.00 9.31 9.69 8.32 10.39 4.11 4.68 11.14 1.50 4.42 6.30 6.66 4.94 8.90 0.00 18.33 9.24 9.51 11.63 8.59 13.41 4.10 63 ER19a ExonRegion 0 27.41 8.34 68.62 27.68 11.34 46.41 7.66 18.69 53.22 7.46 56.25 11.92 10.22 55.01 67.36 22.98 23.07 43.03 28.10 27.28 71.54 62.59 84.84 64 E19a_E20a KnownJunction 0 24.37 14.80 49.14 23.51 8.23 34.18 12.67 16.31 47.45 9.83 41.48 0.00 6.82 52.56 63.54 27.60 13.74 40.33 12.89 32.79 69.01 56.89 84.25 65 ER20a ExonRegion 0 18.08 11.39 63.11 20.27 8.48 38.22 6.31 15.66 52.41 6.81 48.16 3.71 12.35 54.41 49.22 31.32 33.62 37.77 32.42 29.51 78.93 53.01 73.78 66 E20a_E21a KnownJunction 0 30.82 12.10 61.12 14.38 8.06 49.12 6.23 13.47 39.70 5.75 46.01 0.00 0.00 60.04 36.10 35.55 25.15 24.50 11.29 26.97 64.62 33.92 69.74 67 ER21a ExonRegion 0 23.07 13.56 46.70 14.72 7.98 39.08 4.83 15.00 42.37 6.70 34.77 1.04 5.86 42.79 46.91 19.27 23.99 31.74 16.64 21.69 63.16 42.73 63.61 68 E21a_E22a KnownJunction 0 30.82 15.33 56.15 27.24 10.95 43.21 4.50 10.88 44.36 9.03 38.75 6.30 19.80 32.26 27.07 24.95 9.26 33.99 8.66 17.00 57.64 32.27 43.62 69 ER22a ExonRegion 0 22.33 12.03 45.47 19.39 10.62 36.33 4.84 7.33 40.99 7.78 52.78 0.42 8.15 43.88 34.04 26.69 20.93 25.78 12.55 22.90 48.42 41.78 61.84 70 E22a_E23a KnownJunction 0 29.34 14.01 32.64 12.29 10.95 39.18 0.00 5.83 42.51 6.45 40.22 0.00 6.82 27.02 25.71 31.27 28.70 37.18 27.01 17.51 25.88 45.50 60.86 71 I22 Intron 0 5.61 0.63 6.55 4.43 1.67 11.15 3.51 4.42 7.18 2.93 6.93 0.00 1.20 10.36 7.72 5.56 4.12 8.46 1.49 4.65 8.94 8.12 10.53 72 I22_SR1 SilentIntronRegion 0 5.64 0.64 6.59 4.46 1.68 11.22 3.53 4.45 7.22 2.95 6.98 0.00 1.21 10.42 7.76 5.60 4.14 8.51 1.50 4.67 8.99 8.17 10.60 73 E23_Aa NovelBoundary 0 19.48 3.22 12.42 3.60 11.63 21.01 6.14 3.61 10.56 8.86 5.37 0.00 0.00 12.18 16.19 12.05 17.39 17.20 0.00 21.67 21.07 22.84 16.73 74 ER23a ExonRegion 0 66.28 21.37 58.99 40.64 22.58 53.75 10.02 19.99 57.58 9.95 55.92 6.66 11.52 48.23 63.88 27.86 21.34 44.25 17.18 31.54 56.50 71.67 83.05 75 ER23b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76 IG15 Intergenic 0 5.16 2.25 4.05 6.76 4.75 9.76 5.28 5.71 5.31 7.20 2.57 0.96 5.51 5.49 8.59 9.89 2.93 3.66 4.24 8.02 7.33 3.70 7.16 77 IG15_AR1 ActiveIntergenicRegion 0 5.21 2.27 4.08 6.81 4.78 9.84 5.33 5.76 5.35 7.26 2.59 0.97 5.55 5.53 8.65 9.97 2.95 3.70 4.28 8.09 7.39 3.73 7.23