Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM175 Gene 0 93.61 45.98 113.44 132.77 46.34 107.88 30.34 82.15 113.16 130.63 52.45 31.99 58.49 125.37 174.82 101.41 56.34 184.91 43.22 94.98 92.13 47.15 47.16 2 264771 Transcript 0 29.92 8.92 24.54 36.48 15.83 31.63 7.08 21.52 41.22 26.90 15.10 6.10 23.67 31.19 25.61 13.72 10.49 30.50 7.16 28.18 21.37 17.33 16.81 3 452360 Transcript 0 2.96 9.95 9.51 19.89 5.71 13.82 5.48 6.48 13.63 16.94 2.91 8.66 5.60 12.17 12.91 7.10 2.07 17.49 7.20 18.69 6.08 1.83 2.95 4 438836 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 21.11 5.53 2.48 2.41 6.31 24.59 3.63 2.57 3.71 3.76 3.62 0.00 0.00 5.37 15.77 10.82 0.76 4.97 10.78 7.36 6.05 3.95 14.53 6 E1_Ab KnownBoundary 1 86.09 23.55 6.62 8.42 15.96 105.34 16.61 9.00 10.85 9.32 9.79 0.00 0.00 16.36 43.88 39.22 0.00 31.67 39.62 25.63 24.59 14.02 54.38 7 ER1b ExonRegion 1 218.65 89.84 33.21 35.25 95.34 345.37 76.65 25.85 38.85 41.34 38.23 0.00 4.62 90.47 204.75 154.94 50.92 79.05 82.40 84.98 72.40 47.74 130.81 8 E1a_E2a KnownJunction 0 27.34 29.14 39.86 52.31 18.42 43.55 22.43 36.35 55.06 53.48 4.84 0.00 8.28 21.01 25.09 30.42 26.18 106.58 15.62 20.52 17.11 0.00 15.79 9 E1a_E4a NovelJunction 0 21.93 0.00 22.77 58.47 0.00 24.76 11.61 22.43 31.94 99.52 0.00 13.50 0.00 4.94 23.98 12.13 3.46 13.18 7.34 4.73 11.98 15.12 10.76 10 ER2a ExonRegion 0 14.71 12.52 58.46 63.91 11.81 27.18 5.53 51.36 65.68 72.54 31.83 11.13 26.28 75.77 110.86 68.78 32.72 98.01 35.70 64.71 57.76 25.33 50.00 11 E2_Da NovelBoundary 0 13.78 6.51 23.39 20.38 4.33 41.51 2.25 28.63 30.15 40.53 9.11 5.85 19.32 31.96 23.12 28.37 7.85 98.66 14.02 29.15 22.67 2.57 35.60 12 E2a_E3a KnownJunction 1 38.08 13.22 93.05 138.01 11.29 15.96 8.39 71.59 105.58 93.13 17.43 6.90 48.54 95.42 153.53 114.84 17.02 202.29 19.11 58.42 60.42 35.64 70.51 13 I2 Intron 0 22.27 5.12 10.86 11.15 15.91 59.13 8.78 17.67 12.63 25.41 3.54 2.45 8.20 24.30 22.99 14.95 8.30 24.39 10.20 23.36 14.11 7.15 8.73 14 I2_AR1 ActiveIntronRegion 0 22.45 5.16 10.96 11.25 16.05 59.66 8.86 17.83 12.74 25.64 3.57 2.47 8.28 24.49 23.20 15.09 8.38 24.61 10.29 23.57 14.23 7.21 8.81 15 E3_Aa NovelBoundary 0 68.23 0.00 18.04 23.41 8.49 29.24 4.24 35.49 27.57 44.48 11.95 0.00 25.00 59.86 14.96 11.79 30.95 84.65 22.12 37.20 20.76 23.02 7.94 16 ER3a ExonRegion 0 39.18 15.17 89.45 123.15 39.18 38.89 13.82 73.22 117.24 105.78 30.93 19.87 37.52 113.44 118.95 65.54 27.59 149.38 15.03 79.16 74.76 42.69 54.14 17 E3_Da KnownBoundary 0 32.01 9.67 32.85 16.48 51.36 28.51 11.75 20.17 18.87 46.95 2.47 12.45 6.82 45.62 39.80 39.48 4.68 91.69 4.71 40.97 22.36 3.12 3.76 18 E3a_E4a KnownJunction 0 53.12 19.86 68.68 102.95 35.82 67.23 14.53 60.26 119.96 75.03 39.12 18.31 64.77 79.52 60.08 30.33 28.52 84.07 8.56 72.93 56.59 45.25 32.95 19 ER3b ExonRegion 0 63.00 25.01 33.04 29.38 28.08 32.83 13.70 23.38 33.32 58.32 24.76 6.10 11.68 72.92 69.85 53.18 26.86 113.22 18.97 42.41 35.87 25.24 19.56 20 E3b_E4a KnownJunction 0 85.79 41.77 53.90 38.12 27.50 59.17 3.93 40.95 56.37 64.33 44.22 10.80 12.01 54.86 89.38 59.56 33.75 153.87 35.30 41.35 51.34 32.27 19.89 21 ER4a ExonRegion 0 116.91 67.17 138.28 195.39 84.45 196.59 56.55 135.97 207.30 218.79 91.75 55.22 54.17 178.07 194.47 102.17 101.82 278.84 55.45 154.78 174.14 84.25 52.80 22 E4a_E5a KnownJunction 0 180.33 127.28 193.96 336.85 114.94 298.98 88.33 205.45 283.45 302.68 127.35 70.67 118.17 260.58 263.30 207.89 157.83 369.93 131.77 200.00 234.01 96.26 71.96 23 ER5a ExonRegion 0 142.91 91.39 166.32 260.00 75.49 194.24 63.47 177.10 253.44 289.35 113.22 96.33 121.13 210.98 300.78 206.05 125.05 362.76 100.16 194.68 183.16 102.85 95.78 24 E5a_E6a KnownJunction 0 193.22 79.33 150.47 210.80 74.87 150.77 38.82 132.71 176.88 228.49 110.24 131.89 112.82 200.19 364.79 181.83 85.09 317.74 88.19 224.86 135.85 120.39 128.39 25 E5a_E7a NovelJunction 0 0.00 0.00 0.00 7.42 0.00 2.78 0.00 6.24 2.63 6.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.77 3.06 0.00 26 E6_Aa NovelBoundary 1 63.79 3.03 26.11 56.20 32.60 8.52 18.55 54.14 45.69 45.58 17.48 31.21 39.61 14.60 109.15 20.42 27.30 50.66 30.97 41.61 41.64 17.15 16.73 27 ER6a ExonRegion 0 129.05 54.17 135.51 209.01 50.54 135.65 36.81 149.32 188.87 228.20 117.64 94.05 144.74 218.90 327.92 155.38 89.03 332.39 68.84 184.57 158.18 99.84 92.34 28 E6_Da NovelBoundary 0 14.67 3.09 7.18 13.82 8.49 50.14 5.48 2.55 11.66 2.34 9.90 6.30 6.01 19.60 13.35 7.86 0.00 20.10 0.00 23.33 6.12 3.06 0.00 29 E6a_E7a KnownJunction 0 161.58 54.73 125.16 183.33 56.20 151.50 44.74 142.57 174.10 179.20 98.34 88.68 164.27 236.92 288.77 169.70 106.69 282.88 56.10 169.12 182.06 99.57 75.97 30 E6a_E8a NovelJunction 0 20.45 33.09 51.57 76.45 44.74 42.13 2.08 16.47 33.25 25.98 0.00 0.00 0.00 4.36 4.45 57.16 17.67 54.64 8.66 5.43 5.37 3.12 7.68 31 I6 Intron 0 6.34 9.47 13.82 14.36 6.68 21.97 4.08 6.86 10.11 10.10 1.93 0.30 3.12 7.22 9.20 7.42 5.77 17.34 3.45 13.27 4.40 0.87 4.89 32 I6_SR1 SilentIntronRegion 0 6.35 9.49 13.85 14.39 6.69 22.01 4.08 6.87 10.12 10.11 1.93 0.30 3.13 7.23 9.22 7.43 5.78 17.37 3.45 13.29 4.41 0.87 4.89 33 E7_Aa NovelBoundary 1 23.56 24.07 30.78 45.02 34.13 44.86 30.16 25.47 21.85 31.00 5.37 0.00 5.84 12.36 24.72 52.72 0.00 31.09 23.34 5.31 0.00 6.25 4.18 34 ER7a ExonRegion 0 100.79 53.16 136.18 255.01 70.53 149.54 46.84 182.70 198.21 235.53 95.82 76.85 134.28 235.07 250.47 212.47 94.59 352.02 88.47 185.79 175.93 98.92 84.95 35 E7_Da NovelBoundary 0 16.15 11.58 18.27 7.23 0.00 48.04 6.45 7.11 10.45 2.69 2.21 0.00 0.00 7.12 0.00 0.00 0.00 16.58 0.00 0.00 8.96 0.00 4.27 36 E7a_E8a KnownJunction 0 84.16 56.50 159.66 263.84 107.13 114.71 65.54 217.28 214.87 278.77 102.13 55.67 108.76 208.78 171.95 223.45 102.01 312.97 129.98 172.19 186.63 127.12 81.44 37 ER8a ExonRegion 0 157.37 86.57 174.68 259.15 93.18 209.65 56.12 173.73 234.00 265.58 87.88 73.94 131.09 209.47 249.67 181.66 104.53 319.49 88.90 171.53 163.56 66.87 63.77 38 E8a_E9a KnownJunction 0 494.31 119.85 196.83 357.16 158.06 316.35 88.50 189.84 269.67 278.88 84.34 62.72 126.45 248.81 222.76 384.34 113.60 495.49 199.35 196.23 151.85 140.47 152.63 39 E9_Aa NovelBoundary 0 28.15 9.93 30.04 45.52 6.96 33.05 16.47 2.55 10.30 10.15 2.68 0.00 0.00 4.89 13.85 23.16 18.23 60.36 4.61 40.97 19.09 7.72 7.85 40 ER9a ExonRegion 0 183.79 75.50 118.60 175.02 91.18 204.18 61.46 119.33 161.58 210.73 62.42 41.60 123.54 205.44 227.73 197.63 91.97 278.54 74.27 142.28 144.58 82.31 73.86 41 E9_Da NovelBoundary 0 13.26 21.38 19.72 35.56 7.56 7.55 9.58 17.62 39.44 33.85 11.90 6.75 6.82 17.42 38.07 11.88 12.53 74.45 8.09 23.33 12.48 0.00 8.71 42 E9a_E10a KnownJunction 1 150.62 73.01 127.32 116.34 59.08 131.17 43.41 75.58 159.32 182.04 62.07 73.52 145.77 115.02 153.04 95.79 63.86 156.45 21.65 102.08 142.15 58.42 33.55 43 I9 Intron 0 12.75 9.18 14.43 21.79 4.53 12.42 7.23 16.00 13.86 21.87 5.09 2.01 5.24 15.17 21.68 22.37 4.97 28.02 8.39 18.82 12.85 5.10 9.40 44 I9_SR1 SilentIntronRegion 0 12.83 9.25 14.54 21.94 4.57 12.51 7.28 16.12 13.97 22.03 5.13 2.03 5.28 15.29 21.84 22.52 5.01 28.23 8.45 18.96 12.94 5.14 9.46 45 E10_Aa NovelBoundary 0 10.67 2.70 43.67 31.66 20.37 29.87 13.78 24.89 33.97 40.80 13.58 6.30 0.00 22.01 51.67 7.09 8.13 63.26 4.33 26.21 16.49 10.90 7.26 46 ER10a ExonRegion 0 121.25 56.30 118.64 158.82 55.11 121.60 32.50 95.99 150.19 154.70 67.78 37.85 74.04 154.36 229.28 122.23 68.86 201.21 63.71 114.31 136.94 57.31 51.80 47 E10_Da NovelBoundary 0 16.52 41.44 128.06 152.69 24.45 86.83 16.38 82.31 93.72 183.31 23.32 0.00 27.27 50.68 42.28 38.45 15.90 231.31 20.14 137.10 0.00 9.31 19.89 48 E10a_E11a KnownJunction 0 0.00 0.00 5.50 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 E10a_E12a KnownJunction 0 240.78 51.50 134.71 128.16 83.19 144.97 26.90 106.96 133.22 95.44 72.97 22.81 74.18 218.20 199.52 168.33 77.70 144.13 47.34 43.21 154.44 77.09 72.47 50 I10 Intron 0 5.34 20.90 32.93 46.07 11.93 56.18 11.81 28.47 41.05 58.66 6.00 2.77 12.05 24.99 29.45 19.60 12.16 100.46 27.80 54.46 11.97 6.46 6.83 51 I10_AR1 ActiveIntronRegion 0 3.81 26.33 43.41 62.30 16.12 72.10 15.50 37.20 55.33 78.57 6.96 3.18 13.02 28.28 33.72 25.86 12.95 140.17 33.45 68.57 13.96 7.50 7.05 52 I10_AR2 ActiveIntronRegion 0 8.40 11.25 14.11 16.79 4.37 27.89 5.15 12.77 15.33 22.84 4.38 2.02 10.63 19.45 22.21 8.42 11.00 28.58 18.05 29.27 8.50 4.72 6.66 53 E11_Aa NovelBoundary 0 11.19 17.89 19.40 28.33 37.69 146.51 32.06 31.13 41.87 47.55 12.69 12.00 13.15 20.90 56.99 18.97 9.26 59.11 18.45 44.81 14.83 3.06 10.93 54 ER11a ExonRegion 0 5.91 19.90 13.52 37.72 11.41 27.63 10.97 12.96 27.26 33.88 5.82 17.32 11.21 24.34 25.81 14.20 4.15 34.97 14.40 37.39 12.16 3.65 5.90 55 E11_Da NovelBoundary 0 43.34 252.92 64.25 139.18 73.01 159.68 76.05 54.34 91.49 91.87 5.26 5.40 6.33 39.08 80.23 79.81 17.58 139.08 54.68 131.61 33.48 17.02 59.41 56 I11 Intron 0 25.91 54.12 109.09 129.32 38.86 70.81 29.00 45.41 55.88 94.88 10.89 14.91 12.19 29.91 35.49 28.29 14.43 123.56 19.34 104.89 14.66 8.40 10.27 57 I11_AR1 ActiveIntronRegion 0 19.73 50.10 86.28 105.61 38.92 64.94 28.24 33.86 48.94 83.78 11.87 17.33 12.56 26.77 29.84 26.32 14.36 106.80 17.47 94.66 13.27 7.47 10.26 58 I11_SR1 SilentIntronRegion 0 33.23 57.00 117.34 165.49 28.12 49.72 16.20 62.53 59.97 97.29 5.86 7.77 2.46 33.23 56.32 14.81 13.10 131.51 15.42 111.11 13.50 10.75 8.25 59 I11_AR2 ActiveIntronRegion 0 37.30 62.03 154.84 171.55 40.96 87.26 33.18 66.03 69.55 117.59 9.88 11.35 13.36 35.82 43.16 35.09 14.87 156.94 24.02 125.08 17.81 9.89 10.71 60 E12_Aa NovelBoundary 0 121.28 110.84 246.15 302.43 51.53 154.63 37.14 75.17 79.86 169.18 19.37 23.71 32.63 63.87 66.01 44.35 25.99 260.45 92.80 131.93 33.36 22.78 21.08 61 ER12a ExonRegion 0 111.66 52.33 185.00 179.29 47.05 122.20 32.59 98.21 134.01 148.64 62.30 35.18 73.54 143.85 238.66 109.92 65.35 216.25 39.11 101.70 104.11 52.81 50.37 62 ER12b ExonRegion 0 15.52 1.36 2.45 4.09 5.35 3.06 3.09 1.73 0.00 1.91 2.58 0.00 6.25 8.66 0.97 0.00 2.20 2.46 2.12 4.26 1.47 2.78 2.94 63 IG15 Intergenic 0 5.16 2.25 4.05 6.76 4.75 9.76 5.28 5.71 5.31 7.20 2.57 0.96 5.51 5.49 8.59 9.89 2.93 3.66 4.24 8.02 7.33 3.70 7.16 64 IG15_AR1 ActiveIntergenicRegion 0 5.21 2.27 4.08 6.81 4.78 9.84 5.33 5.76 5.35 7.26 2.59 0.97 5.55 5.53 8.65 9.97 2.95 3.70 4.28 8.09 7.39 3.73 7.23