Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KLF3 Gene 0 85.92 52.24 61.78 98.77 110.68 189.23 106.60 49.78 68.14 81.17 87.65 41.08 159.42 103.63 75.64 87.98 150.18 64.05 107.08 89.32 123.28 173.67 73.98 2 261438 Transcript 0 49.95 33.80 38.07 72.29 56.32 152.76 65.80 48.07 76.19 86.55 149.90 45.75 228.66 143.67 83.55 140.46 233.70 121.56 130.40 102.58 211.66 170.88 112.81 3 ER1a ExonRegion 0 6.84 4.08 4.59 6.03 2.57 25.15 6.56 6.42 7.42 12.52 16.73 0.24 11.78 26.93 9.31 21.24 30.50 23.55 15.85 18.00 27.86 28.26 14.32 4 E1a_E2a KnownJunction 0 17.34 15.85 16.23 32.23 0.00 73.14 15.90 12.69 33.16 46.82 79.81 6.00 40.42 84.94 37.33 81.35 150.72 69.43 35.48 66.22 115.96 79.73 79.05 5 I1_AR1 ActiveIntronRegion 0 18.98 7.98 0.00 3.19 19.49 175.70 6.68 0.00 3.09 2.86 0.00 0.00 2.16 3.75 8.03 0.00 5.55 11.11 167.60 16.37 14.82 5.84 3.29 6 I1_AR2 ActiveIntronRegion 0 8.04 2.11 16.54 13.19 5.02 7.79 4.89 7.09 8.77 5.16 8.66 1.41 1.52 6.25 9.09 5.57 7.70 7.84 8.50 9.19 6.23 4.29 1.37 7 I1_AR4 ActiveIntronRegion 0 50.89 5.45 8.76 11.19 16.68 2.42 3.49 7.98 1.92 2.46 0.00 2.67 0.00 0.00 3.40 1.39 1.33 1.53 2.85 1.99 3.84 3.64 5.00 8 I1_AR5 ActiveIntronRegion 0 24.44 14.43 13.40 11.61 15.36 1.12 4.78 3.85 3.79 3.51 1.56 14.80 3.93 0.00 4.12 5.94 5.32 0.66 0.82 4.26 1.92 3.36 4.17 9 I1_SR3 SilentIntronRegion 0 28.99 5.05 11.77 14.68 11.29 3.32 11.91 7.69 6.31 4.50 0.38 0.76 5.80 0.87 4.03 2.90 4.33 2.15 7.97 6.04 3.43 2.31 1.31 10 I1_AR7 ActiveIntronRegion 0 22.29 2.68 16.96 11.77 8.18 4.41 8.86 4.64 3.83 3.54 0.25 1.12 3.72 0.69 4.75 5.47 5.85 4.06 7.08 2.41 2.91 0.60 2.82 11 ER2a ExonRegion 1 21.50 12.56 29.28 44.56 36.26 134.06 47.08 39.83 50.16 67.32 143.05 11.82 76.95 121.27 49.77 99.16 173.78 117.08 99.08 87.59 192.85 108.54 82.65 12 E2a_E3a KnownJunction 0 15.11 11.38 37.58 70.75 31.07 99.54 29.59 72.78 71.21 94.39 149.35 50.72 152.26 138.74 95.31 115.70 213.28 164.36 117.74 99.39 232.65 128.47 99.62 13 I2_AR4 ActiveIntronRegion 0 2.12 0.00 7.35 2.50 2.68 0.00 7.72 3.46 3.71 3.44 3.87 4.33 14.85 1.62 2.90 20.31 2.75 5.54 19.11 10.28 8.81 0.00 5.87 14 I2_AR6 ActiveIntronRegion 0 2.72 0.00 6.21 3.99 0.00 0.00 5.20 3.46 6.79 2.38 3.04 8.66 0.00 3.25 2.90 5.94 5.42 5.54 28.44 4.71 9.13 2.08 3.15 15 ER3a ExonRegion 0 34.03 22.66 42.47 64.28 29.47 130.03 49.32 58.80 92.27 99.72 187.51 52.16 236.16 224.65 94.38 193.13 297.91 160.59 192.17 120.18 300.38 263.55 164.30 16 E3a_E4a KnownJunction 0 52.68 39.60 48.22 73.82 75.47 154.23 103.87 57.54 105.32 108.36 239.17 48.32 243.17 171.41 95.80 100.40 229.64 101.31 75.20 69.61 201.89 149.04 81.09 17 ER4a ExonRegion 0 130.62 52.01 43.47 94.30 60.00 263.91 90.49 61.89 111.23 115.00 233.16 62.79 393.65 248.53 102.20 254.09 303.44 148.16 223.48 122.71 231.33 302.95 203.85 18 E4_Da NovelBoundary 0 0.00 3.16 4.79 13.05 19.78 11.02 6.32 6.37 15.42 8.73 28.69 0.00 33.76 9.77 10.75 8.54 16.55 30.88 22.78 7.73 17.67 28.47 20.32 19 E4a_E5a KnownJunction 0 58.31 42.23 32.17 60.53 28.95 187.56 60.33 33.23 94.10 79.38 149.51 53.87 314.10 122.32 95.19 128.43 333.05 106.29 92.24 116.39 249.40 148.67 74.01 20 ER5a ExonRegion 0 67.97 46.94 41.85 87.22 91.19 234.49 93.63 60.78 95.41 104.28 174.53 68.84 413.04 186.49 113.00 199.45 310.74 158.95 203.11 149.73 302.43 234.14 141.01 21 E5a_E6a KnownJunction 0 46.82 64.20 52.57 150.30 132.09 174.10 104.14 73.93 110.88 142.66 206.37 107.28 491.04 170.58 150.81 283.69 400.56 240.89 285.47 191.88 378.63 269.79 242.00 22 I5 Intron 0 18.59 4.21 2.72 7.94 7.90 3.01 7.35 2.60 1.58 2.72 1.80 1.19 3.98 0.87 3.17 1.35 5.25 2.41 7.64 3.81 2.28 2.26 2.07 23 I5_AR2 ActiveIntronRegion 0 23.33 6.09 3.89 11.22 9.35 1.86 7.79 1.49 1.40 3.01 1.58 0.15 5.22 0.94 2.98 0.86 5.27 2.67 5.42 5.03 3.52 1.36 3.43 24 I5_SR2 SilentIntronRegion 0 18.28 3.49 3.23 7.24 10.28 4.01 8.80 4.57 1.59 2.69 1.66 1.15 1.30 1.13 2.18 1.92 6.79 0.39 6.93 1.63 1.93 3.37 3.02 25 I5_AR3 ActiveIntronRegion 0 82.63 5.68 4.85 6.30 24.08 11.00 22.56 6.77 3.09 4.73 3.79 2.35 4.30 1.49 2.90 1.11 3.58 1.00 17.39 4.79 2.20 2.69 7.46 26 I5_AR4 ActiveIntronRegion 0 86.83 6.05 3.62 4.93 9.05 5.06 15.23 4.24 3.71 2.92 0.23 0.00 10.83 2.44 4.21 1.49 5.34 0.84 23.81 6.33 0.89 2.03 2.38 27 ER6a ExonRegion 0 98.20 60.30 70.29 111.19 132.45 204.17 122.94 50.92 66.93 81.61 69.71 41.21 142.66 84.58 75.89 68.40 127.11 46.55 94.60 86.63 94.83 166.57 59.00