Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MFSD10 Gene 0 96.10 100.44 398.72 216.89 41.40 250.43 49.51 132.77 107.39 214.56 261.74 35.69 33.81 173.83 195.12 134.34 108.47 310.96 132.47 168.11 239.07 163.07 138.55 2 355443 Transcript 1 21.91 27.25 19.85 12.06 9.90 57.49 16.55 8.99 4.26 27.64 65.72 0.00 0.00 23.31 63.97 29.72 26.90 19.03 13.70 21.38 35.81 17.81 28.78 3 329687 Transcript 0 15.48 5.77 60.95 13.33 2.49 35.97 7.78 11.73 15.79 23.25 44.03 4.77 3.98 17.55 27.69 18.28 5.17 41.64 21.62 23.38 29.81 8.19 13.17 4 IG50 Intergenic 0 8.04 10.19 10.30 12.16 6.11 27.99 17.09 11.88 9.52 26.12 7.75 9.67 8.95 19.99 28.06 16.89 13.00 29.40 16.55 19.33 16.37 15.34 9.44 5 IG50_AR1 ActiveIntergenicRegion 0 8.05 10.20 10.30 12.17 6.11 28.01 17.11 11.89 9.53 26.15 7.75 9.67 8.96 20.01 28.08 16.91 13.01 29.43 16.56 19.35 16.39 15.35 9.45 6 ER1a ExonRegion 1 21.91 27.25 19.85 12.06 9.90 57.49 16.55 8.99 4.26 27.64 65.72 0.00 0.00 23.31 63.97 29.72 26.90 19.03 13.70 21.38 35.81 17.81 28.78 7 I1 Intron 0 7.74 5.31 43.21 12.37 1.86 51.71 5.30 12.55 15.06 19.63 27.56 0.00 1.25 12.24 16.16 8.79 13.79 29.58 42.14 15.55 31.05 3.63 15.33 8 I1_AR1 ActiveIntronRegion 0 10.68 7.12 63.28 18.05 2.11 63.98 7.12 18.04 21.58 28.02 38.99 0.00 1.89 15.78 22.96 10.72 20.15 36.97 51.26 20.70 43.21 5.49 19.97 9 E2_Aa NovelBoundary 0 7.19 3.16 135.39 44.25 0.00 47.42 2.25 42.35 39.93 65.70 42.64 6.00 0.00 30.73 43.14 19.14 16.36 89.75 43.20 60.98 45.72 5.20 12.04 10 ER2a ExonRegion 0 15.48 5.77 60.95 13.33 2.49 35.97 7.78 11.73 15.79 23.25 44.03 4.77 3.98 17.55 27.69 18.28 5.17 41.64 21.62 23.38 29.81 8.19 13.17 11 E2_Ab KnownBoundary 0 32.38 13.75 142.63 52.14 7.72 95.97 11.92 31.83 49.22 58.88 52.86 5.55 0.00 24.37 28.80 15.98 11.69 86.39 40.28 28.51 50.10 22.96 22.96 12 ER2b ExonRegion 1 44.48 46.71 283.59 109.16 17.64 158.25 25.53 75.09 72.41 134.01 193.44 5.71 7.91 91.21 109.64 61.67 84.08 174.06 85.84 126.71 166.55 72.11 68.08 13 E2a_E3a KnownJunction 1 43.71 50.06 409.03 191.02 21.39 122.37 23.01 131.44 131.65 216.45 157.30 24.01 19.97 130.85 229.19 183.29 67.51 308.29 124.05 185.62 212.70 146.47 142.21 14 ER3a ExonRegion 0 43.62 56.10 354.69 159.81 44.36 203.63 50.13 103.78 100.10 173.18 192.77 35.75 13.05 136.44 190.50 111.22 72.55 161.86 100.26 134.63 219.28 131.61 123.28 15 E3a_E4a KnownJunction 1 103.57 113.07 538.15 322.57 152.72 458.43 135.49 212.02 156.68 257.34 253.33 66.47 0.00 163.28 132.39 117.75 110.71 379.92 183.91 168.87 353.24 228.71 116.26 16 ER4a ExonRegion 0 81.73 129.41 399.31 191.60 61.18 356.36 77.62 150.14 133.08 247.48 298.34 45.63 18.81 165.86 194.64 140.75 125.43 338.17 130.02 178.05 317.72 177.84 139.18 17 E4_Da NovelBoundary 0 35.64 64.13 266.34 126.36 15.96 119.25 21.42 67.11 66.52 83.19 66.33 12.90 0.00 75.05 37.70 65.71 60.03 167.06 77.56 57.78 80.43 54.13 33.63 18 E4a_E5a KnownJunction 1 85.57 88.47 227.19 145.50 19.86 116.69 26.19 141.21 93.49 242.94 270.17 42.61 6.17 152.45 165.03 175.51 92.57 355.63 125.93 149.50 273.67 240.46 136.67 19 I4 Intron 1 45.42 49.32 270.78 134.62 16.52 140.96 31.13 60.57 64.65 92.69 80.40 8.91 4.07 67.09 51.82 50.68 40.27 191.92 80.52 80.37 59.56 34.30 43.59 20 I4_AR1 ActiveIntronRegion 1 45.68 49.61 272.33 135.39 16.61 141.77 31.31 60.91 65.02 93.23 80.86 8.96 4.09 67.46 52.12 50.97 40.49 193.02 80.99 80.80 59.90 34.50 43.84 21 E5_Aa NovelBoundary 0 95.79 57.49 472.48 204.70 11.46 151.33 46.99 76.23 79.63 130.44 95.76 11.85 19.97 92.30 79.73 62.63 64.70 327.36 154.55 97.73 62.33 37.84 60.78 22 ER5a ExonRegion 0 141.74 135.43 604.71 319.10 53.03 299.07 58.20 194.83 153.76 321.17 377.64 60.78 57.05 253.44 263.72 211.21 181.42 538.87 199.28 244.95 381.85 271.59 219.77 23 E5a_E6a KnownJunction 0 67.64 54.53 575.26 307.19 10.87 178.59 37.89 177.69 136.54 335.43 148.25 31.81 40.26 106.07 99.88 115.61 131.93 407.98 64.28 173.47 169.02 97.24 94.33 24 ER6a ExonRegion 0 118.09 135.75 636.72 400.30 68.36 438.41 79.02 222.98 152.50 350.98 423.27 62.67 58.13 247.97 265.48 245.55 168.75 623.35 221.38 230.99 339.59 264.71 225.92 25 E6_Da NovelBoundary 0 26.82 15.72 93.37 40.92 4.33 46.28 14.22 21.48 23.09 39.30 17.79 25.06 0.00 23.96 23.49 18.80 11.69 95.67 16.28 9.52 14.09 8.45 11.52 26 E6a_E7a KnownJunction 0 150.77 180.30 839.38 506.96 91.68 341.45 51.98 287.23 164.67 343.86 323.71 56.72 108.60 244.22 347.86 217.38 159.42 707.03 192.48 301.18 283.93 268.69 221.52 27 I6_SR1 SilentIntronRegion 0 15.10 15.57 45.83 25.75 4.95 50.40 7.35 14.29 12.16 21.21 20.94 3.97 0.87 14.15 13.39 12.55 13.07 46.60 16.79 11.24 17.45 6.10 5.43 28 E7_Aa NovelBoundary 0 9.63 33.61 109.93 53.51 15.62 57.58 16.38 44.03 34.58 40.70 14.48 22.36 0.00 16.83 41.91 11.88 22.07 102.60 26.64 26.46 17.30 20.76 8.37 29 ER7a ExonRegion 0 114.54 139.89 666.76 345.10 51.89 297.70 54.32 232.37 181.05 336.73 348.79 54.73 58.86 240.83 251.61 181.49 139.09 489.28 149.54 220.55 300.84 217.78 204.16 30 E7_Da NovelBoundary 0 24.97 23.88 108.66 50.84 7.81 76.15 29.37 51.22 29.31 38.76 50.75 6.30 13.64 26.84 29.30 12.22 21.88 90.20 21.18 43.40 22.24 12.12 15.71 31 E7a_E8a KnownJunction 0 118.02 127.21 541.05 301.39 40.66 221.24 31.93 226.77 182.90 343.43 269.96 61.67 61.85 239.39 187.53 102.11 128.38 289.39 134.12 183.38 240.87 220.75 148.96 32 I7 Intron 0 14.99 6.72 56.91 21.10 5.05 51.09 11.25 9.73 13.91 15.33 12.78 1.68 10.94 13.99 25.95 11.23 9.35 53.76 27.08 14.07 13.53 9.84 9.71 33 I7_AR1 ActiveIntronRegion 0 15.25 6.85 57.97 21.50 5.12 51.99 11.44 9.91 14.15 15.62 12.97 1.72 11.15 14.25 26.44 11.41 9.53 54.74 27.59 14.29 13.76 10.02 9.89 34 ER8a ExonRegion 0 170.34 166.75 678.01 363.74 54.40 357.36 68.61 224.37 173.43 332.67 410.31 53.38 58.00 271.74 282.69 224.10 155.64 490.45 223.77 228.49 326.64 264.57 216.55 35 E8_Da NovelBoundary 0 80.46 55.52 265.63 134.68 19.86 97.90 30.21 94.96 119.94 145.75 36.80 12.00 13.64 45.26 28.56 54.26 34.88 186.21 80.94 76.13 93.16 19.23 47.21 36 E8a_E9a KnownJunction 0 204.63 199.37 450.01 324.43 51.78 373.48 74.11 193.25 130.00 225.61 364.78 62.87 115.09 261.88 258.36 164.06 150.63 348.46 169.04 198.14 282.01 248.61 193.26 37 E8a_E10a NovelJunction 0 3.78 27.23 9.93 14.12 11.46 23.74 11.22 29.57 16.98 35.30 2.68 0.00 6.82 12.42 10.38 8.72 12.62 8.17 0.00 5.94 14.58 13.78 0.00 38 I8 Intron 0 25.45 16.02 53.00 16.84 3.33 64.63 14.27 18.16 6.87 21.26 24.84 4.44 8.35 22.50 29.30 23.41 6.84 27.46 46.23 32.64 24.67 20.73 29.22 39 I8_AR1 ActiveIntronRegion 0 25.85 16.29 53.86 17.12 3.38 65.70 14.49 18.46 6.97 21.60 25.26 4.51 8.49 22.87 29.76 23.80 6.96 27.91 46.96 33.16 25.08 21.08 29.71 40 E9_Aa NovelBoundary 0 53.42 18.94 174.45 109.41 14.94 121.92 25.00 25.01 39.21 78.49 46.59 0.00 18.83 35.91 53.28 35.12 20.66 120.67 51.67 59.57 44.11 29.27 27.32 41 ER9a ExonRegion 0 183.63 133.86 483.66 274.89 50.94 352.64 71.30 136.01 121.69 250.28 359.09 53.62 65.10 247.46 220.73 177.26 146.81 373.19 178.85 221.80 290.12 219.80 181.32 42 E9a_E10a KnownJunction 0 109.80 127.41 392.24 230.31 25.38 343.78 56.97 106.09 92.56 212.16 251.54 55.52 93.99 201.66 137.96 138.60 75.74 335.90 118.03 156.98 225.86 187.62 144.09 43 ER10a ExonRegion 0 104.43 131.91 367.34 199.22 45.40 291.49 55.24 114.02 92.92 212.59 289.26 26.98 41.64 232.71 257.19 134.76 101.64 306.08 149.54 192.61 252.77 195.37 144.86 44 E10a_E11a KnownJunction 1 171.88 202.53 394.87 293.10 73.77 268.94 88.77 131.27 114.21 239.42 250.27 6.30 32.30 196.95 246.12 135.26 87.98 352.93 150.31 206.58 282.32 228.22 137.69 45 ER11a ExonRegion 0 121.96 119.52 376.21 242.22 48.11 262.27 52.32 113.32 97.29 221.69 225.18 22.82 33.22 211.03 227.51 139.19 73.44 313.69 121.38 184.93 247.37 153.53 132.88 46 E11a_E12a KnownJunction 0 167.88 127.61 401.02 291.57 57.47 286.94 54.32 138.79 100.66 223.44 214.00 83.43 48.05 196.60 192.35 177.56 93.50 376.15 97.04 203.51 213.56 110.77 176.62 47 E12_Aa NovelBoundary 0 26.89 12.83 69.72 18.38 12.56 54.63 23.27 21.65 14.12 45.40 18.95 0.00 0.00 16.83 11.25 15.04 12.34 71.88 19.48 29.59 14.39 7.84 7.34 48 ER12a ExonRegion 0 110.27 93.09 309.84 193.70 48.22 225.52 44.49 107.45 101.68 189.35 205.92 50.99 33.82 197.96 227.68 134.34 79.81 294.18 79.07 175.98 211.73 142.84 158.64 49 E12_Da NovelBoundary 0 38.30 31.44 193.64 58.70 11.38 101.19 40.50 51.18 45.98 64.33 60.86 11.85 0.00 67.63 93.08 38.45 13.37 163.58 14.02 72.42 34.97 22.29 18.78 50 E12a_E13a KnownJunction 0 85.87 69.86 188.11 167.38 32.34 182.57 36.92 74.92 90.45 180.89 146.56 12.15 25.81 140.03 146.36 105.87 72.28 223.43 65.98 115.50 186.38 153.94 127.53 51 I12 Intron 0 14.12 28.11 53.09 18.39 1.28 27.97 11.99 11.05 13.16 29.33 40.54 6.80 4.08 34.97 47.75 28.33 14.16 42.91 22.77 55.78 22.06 6.95 4.20 52 I12_AR1 ActiveIntronRegion 0 14.35 28.63 54.06 18.72 1.30 28.50 12.22 11.26 13.41 29.87 41.25 6.93 4.15 35.62 48.63 28.87 14.43 43.73 23.21 56.82 22.48 7.08 4.28 53 E13_Aa NovelBoundary 0 33.93 54.40 229.23 63.93 7.81 76.89 22.48 54.09 49.68 74.06 72.12 0.00 0.00 28.25 45.00 32.98 28.33 137.46 31.15 62.19 34.22 21.06 22.71 54 ER13a ExonRegion 0 75.26 81.33 238.30 146.34 29.78 166.73 36.51 95.06 72.42 140.11 169.37 20.46 20.80 117.97 155.83 79.07 79.87 152.75 99.46 123.82 166.79 109.29 86.10 55 IG49 Intergenic 0 1.76 2.53 4.93 3.38 1.95 16.57 1.65 4.82 3.25 7.81 1.81 1.56 0.34 1.00 2.16 0.62 0.69 2.48 1.32 4.42 0.69 0.43 5.49 56 IG49_SR2 SilentIntergenicRegion 0 1.82 2.37 5.69 3.39 2.29 18.34 1.89 5.08 3.39 8.83 1.71 0.98 0.41 0.91 2.33 0.54 0.82 2.97 1.39 5.02 0.82 0.31 5.39 57 IG49_AR1 ActiveIntergenicRegion 0 4.23 2.03 2.45 4.63 0.00 9.90 2.65 5.19 5.06 7.68 3.09 1.30 0.00 3.25 2.90 2.97 0.00 0.00 3.19 4.47 0.00 2.08 14.68