Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EVC Gene 0 11.17 13.63 21.34 10.77 8.39 16.02 16.52 16.90 19.54 13.40 42.21 2.20 1.14 0.77 0.32 0.13 0.26 10.06 17.68 13.52 200.16 100.07 109.30 2 264956 Transcript 0 2.71 0.58 4.04 0.99 0.95 1.45 9.55 4.54 8.02 4.36 24.87 0.27 0.00 0.00 0.00 0.00 0.00 0.98 6.30 6.26 35.80 25.86 37.07 3 382674 Transcript 0 13.06 30.66 23.02 14.58 10.73 27.57 18.31 19.97 23.52 17.85 9.48 1.70 0.09 0.80 0.00 0.00 0.00 14.11 13.59 22.33 95.57 58.53 64.87 4 ER1a ExonRegion 0 0.00 0.00 0.17 0.00 0.00 1.04 0.00 0.23 0.79 0.36 9.22 0.00 0.00 0.19 0.00 0.00 0.00 2.50 2.14 0.61 55.81 3.49 20.07 5 E1a_E2a KnownJunction 0 0.00 0.00 1.66 0.00 0.00 0.00 0.00 2.26 3.30 2.77 16.21 0.00 0.00 0.00 0.00 0.00 0.00 3.77 12.80 0.00 96.99 35.21 42.77 6 ER2a ExonRegion 0 2.13 0.65 4.06 2.95 0.00 3.74 1.29 5.80 6.53 5.32 34.53 2.47 0.00 1.01 0.00 0.00 0.00 1.39 12.26 3.71 165.75 53.53 76.54 7 E2a_E3a KnownJunction 0 3.56 2.76 6.36 9.52 0.00 16.98 2.25 6.65 10.33 9.56 55.54 6.30 0.00 0.00 0.00 0.00 0.00 0.00 8.19 3.00 266.82 63.87 74.95 8 ER3a ExonRegion 0 2.95 0.27 11.71 2.97 0.00 11.02 3.56 8.00 6.19 7.09 36.61 1.44 0.00 0.00 1.24 0.00 0.00 2.38 8.72 4.53 238.66 69.40 89.99 9 E3a_E4a KnownJunction 0 3.26 0.00 6.30 0.00 0.00 2.27 3.71 5.01 1.62 5.91 29.59 6.30 0.00 0.00 0.00 0.00 0.00 2.11 18.45 2.81 188.92 46.41 62.66 10 ER4a ExonRegion 0 2.76 0.31 6.58 5.51 4.13 3.72 4.49 6.60 7.47 5.23 34.64 1.26 0.00 0.40 0.45 0.00 0.00 3.14 11.61 2.98 219.36 69.72 84.94 11 E4a_E5a KnownJunction 0 9.71 3.09 21.05 4.96 8.15 5.39 5.34 6.65 7.78 5.99 26.48 0.00 0.00 2.47 0.00 0.00 0.00 4.93 4.71 6.07 196.20 48.44 93.39 12 ER5a ExonRegion 0 5.65 1.60 10.74 6.49 4.94 14.15 8.68 7.08 7.09 7.14 48.03 0.76 2.32 2.01 0.00 0.00 0.00 1.24 17.09 1.25 188.12 87.29 127.59 13 E5a_E6a KnownJunction 0 3.04 0.00 5.00 5.83 3.23 7.33 4.37 2.18 5.41 8.06 49.28 6.30 0.00 0.00 0.00 0.00 0.00 0.00 8.75 2.62 149.25 105.57 103.37 14 ER6a ExonRegion 0 1.99 0.00 7.18 5.82 8.92 7.04 8.85 5.78 8.83 4.34 41.16 1.18 0.00 0.00 0.00 0.00 0.00 0.95 9.78 2.49 139.08 103.00 106.02 15 E6a_E7a KnownJunction 0 5.93 0.00 9.85 1.76 13.75 4.66 17.49 13.06 9.49 5.80 41.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.22 5.43 140.54 114.08 104.74 16 ER7a ExonRegion 0 7.78 0.00 11.39 5.58 14.23 12.28 15.34 10.50 13.58 6.85 48.52 2.64 2.85 1.34 0.00 0.00 0.00 3.52 22.09 2.13 165.57 82.74 116.00 17 E7a_E8a KnownJunction 0 0.00 0.00 7.10 3.73 0.00 10.79 10.33 6.28 15.62 7.95 48.01 0.00 0.00 0.00 0.00 0.00 0.00 8.04 17.98 2.56 197.44 87.69 117.20 18 ER8a ExonRegion 0 6.75 0.00 12.87 3.03 9.78 10.92 9.33 7.37 14.00 11.51 41.94 1.14 2.45 0.43 0.00 0.00 0.00 4.01 17.83 1.58 194.81 82.40 103.19 19 E8a_E9a KnownJunction 0 7.41 0.00 8.01 3.23 12.99 16.30 14.88 4.97 11.08 2.71 18.95 0.00 0.00 0.00 0.00 0.00 0.00 7.42 4.80 3.26 171.00 59.46 107.47 20 ER9a ExonRegion 0 1.54 0.00 5.95 2.85 3.53 10.97 6.66 2.72 4.11 4.93 31.71 0.84 0.09 1.21 0.00 0.00 0.30 5.19 11.52 2.43 153.61 49.69 81.41 21 E9a_E10a KnownJunction 0 0.00 0.00 4.14 3.53 0.00 2.73 8.61 2.22 3.07 3.98 41.12 0.00 0.00 0.00 0.00 0.00 4.68 8.83 18.64 3.13 189.41 51.68 56.25 22 ER10a ExonRegion 0 6.16 0.00 10.55 4.20 5.50 8.04 3.47 6.94 7.64 5.20 44.15 1.22 1.04 0.62 0.00 0.00 1.26 4.29 14.34 1.93 187.91 65.33 107.30 23 E10a_E11a KnownJunction 0 3.78 0.00 11.18 5.86 0.00 13.06 10.11 11.05 5.93 3.14 64.07 0.00 0.00 2.47 0.00 0.00 4.77 1.87 12.89 0.00 243.53 61.85 111.83 24 ER11a ExonRegion 0 4.21 0.00 12.65 4.36 2.11 9.30 9.71 8.87 7.32 8.12 39.73 2.23 1.14 1.92 0.00 0.00 0.83 5.75 18.28 2.19 219.28 52.13 110.58 25 E11a_E12a KnownJunction 0 3.41 0.00 11.32 2.06 7.81 2.44 3.49 11.05 8.88 9.27 33.64 0.00 5.84 0.00 0.00 0.00 0.00 1.70 12.89 0.00 185.08 70.60 122.92 26 E12_Aa NovelBoundary 0 0.00 0.00 2.54 4.06 0.00 8.01 3.89 17.25 6.57 9.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.56 4.71 6.52 2.90 0.00 3.67 27 ER12a ExonRegion 0 3.36 0.49 17.86 7.96 4.15 5.54 8.76 13.82 9.74 10.91 29.54 2.56 0.26 0.90 0.00 0.00 0.00 4.54 20.01 2.76 201.99 77.68 132.20 28 E12a_E13a KnownJunction 0 0.00 0.00 14.07 7.76 0.00 14.48 3.89 9.45 9.66 3.87 12.48 0.00 0.00 2.30 0.00 0.00 0.00 7.63 13.37 3.26 170.81 92.34 91.25 29 ER13a ExonRegion 0 4.27 0.00 10.10 4.14 2.99 6.70 5.90 7.68 8.56 6.09 20.75 4.96 0.00 0.32 0.00 0.00 0.00 2.77 5.50 7.02 161.75 65.02 72.13 30 E13a_E14a KnownJunction 0 7.04 0.00 9.43 1.80 4.33 4.94 0.00 8.13 7.93 8.00 27.01 0.00 0.00 2.12 0.00 0.00 0.00 3.90 3.58 5.50 129.79 60.87 90.40 31 ER14a ExonRegion 0 3.73 0.00 9.63 2.80 1.67 3.23 3.95 4.74 10.19 5.55 29.16 0.00 0.00 1.42 0.00 0.00 0.00 3.84 11.73 5.46 123.62 46.37 73.93 32 E14a_E15a KnownJunction 0 3.63 0.00 8.63 0.00 0.00 0.00 2.08 4.31 1.50 2.31 20.74 0.00 0.00 0.00 0.00 0.00 0.00 2.28 4.71 0.00 84.45 42.50 62.14 33 ER15a ExonRegion 0 4.57 0.00 9.47 1.99 1.76 6.81 6.72 3.16 3.40 2.73 26.63 1.28 0.93 0.66 0.00 0.00 0.00 4.52 2.85 4.12 111.97 44.85 73.36 34 E15a_E16a KnownJunction 0 3.78 0.00 13.31 4.13 3.65 5.05 8.04 2.30 12.18 5.72 20.69 6.30 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 150.37 53.40 66.84 35 I15_AR1 ActiveIntronRegion 0 2.82 1.42 3.68 0.09 2.27 1.93 6.22 3.17 1.42 0.99 23.55 0.00 0.00 1.14 0.00 0.00 0.00 2.40 0.21 2.27 34.12 15.80 37.25 36 ER16a ExonRegion 0 8.61 1.43 14.85 5.83 1.25 5.26 9.71 8.89 11.24 9.29 40.94 0.69 1.36 0.81 0.00 0.00 0.00 6.64 5.82 2.88 168.48 73.31 105.50 37 E16_Da NovelBoundary 0 0.00 2.96 3.49 0.00 0.00 0.00 16.47 4.11 1.30 4.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.33 3.41 38 E16a_E17a KnownJunction 0 6.45 0.00 19.57 5.53 0.00 5.05 7.46 16.96 11.98 10.42 53.07 0.00 0.00 2.47 0.00 0.00 0.00 1.74 8.85 0.00 170.88 62.83 115.75 39 E17_Aa NovelBoundary 0 3.41 6.71 7.54 4.06 0.00 5.28 16.61 6.49 18.46 12.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.33 8.76 3.15 0.00 15.96 40 ER17a ExonRegion 0 6.88 0.00 17.82 6.33 2.44 9.74 7.27 12.16 19.61 7.93 43.56 3.25 0.04 0.17 1.61 0.00 0.00 5.89 9.84 5.19 178.85 82.08 117.41 41 E17a_E18a KnownJunction 0 0.00 0.00 16.50 1.83 0.00 0.00 7.60 11.95 14.32 5.43 28.90 0.00 0.00 0.00 6.30 0.00 0.00 2.57 0.00 0.00 201.83 93.32 65.64 42 ER18a ExonRegion 0 4.65 0.00 9.52 1.65 1.43 4.35 4.55 10.70 11.06 5.87 38.61 1.43 0.00 0.00 0.57 0.00 0.00 1.47 9.83 3.32 219.40 85.83 84.24 43 E18a_E19a KnownJunction 0 3.78 0.00 18.21 0.00 4.07 5.39 8.39 5.87 12.53 2.74 28.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.04 6.52 186.01 68.34 77.68 44 ER19a ExonRegion 0 6.10 3.31 11.29 4.38 3.87 6.73 8.38 9.30 11.22 7.63 44.87 1.93 0.00 0.66 2.69 0.00 0.11 7.63 10.81 15.17 210.31 80.37 127.09 45 E19a_E20a KnownJunction 0 6.67 0.00 11.44 5.36 0.00 10.33 6.40 7.56 5.56 5.78 29.95 0.00 0.00 0.00 0.00 0.00 0.00 2.24 21.55 5.82 247.54 78.93 113.87 46 E20_Aa NovelBoundary 0 0.00 2.96 0.00 1.60 4.07 13.12 21.24 4.15 10.79 15.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 6.14 0.00 2.94 0.00 47 ER20a ExonRegion 0 9.81 2.78 6.70 1.45 2.44 2.93 8.48 6.37 12.31 3.44 32.05 1.62 0.00 0.90 0.00 0.00 1.41 1.30 9.44 4.64 191.76 71.83 73.34 48 E20a_E21a KnownJunction 0 12.82 0.00 5.12 2.06 0.00 2.90 8.35 8.91 8.07 3.92 32.22 0.00 0.00 2.47 0.00 0.00 0.00 4.64 4.80 0.00 154.32 57.99 77.42 49 ER21a ExonRegion 0 15.08 1.56 23.51 9.67 7.60 12.19 17.71 17.14 19.62 10.98 58.78 3.25 2.02 0.99 0.49 0.28 0.42 8.02 20.65 9.45 271.29 145.06 145.18 50 E21_Da KnownBoundary 0 9.04 2.70 5.68 1.96 0.00 2.10 3.97 6.90 9.03 3.20 33.01 6.00 0.00 0.00 0.00 0.00 0.00 0.00 8.00 9.08 27.68 39.01 67.95 51 E21a_E22a KnownJunction 0 25.19 0.00 21.29 7.66 7.13 12.61 11.44 7.39 14.81 6.93 9.95 5.85 0.00 0.00 0.00 0.00 0.00 1.91 13.08 4.99 229.50 64.30 88.86 52 E21a_E23a NovelJunction 0 3.19 0.00 0.00 0.00 3.65 0.00 2.25 6.16 0.00 0.00 8.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.15 14.14 3.24 53 E21a_E24a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.84 8.14 12.21 54 ER21b ExonRegion 0 2.71 0.58 4.04 0.99 0.95 1.45 9.55 4.54 8.02 4.36 24.87 0.27 0.00 0.00 0.00 0.00 0.00 0.98 6.30 6.26 35.80 25.86 37.07 55 E21_Db NovelBoundary 0 3.04 0.00 12.12 4.99 7.98 0.00 11.35 10.10 9.92 3.28 32.38 0.00 0.00 0.00 0.00 0.00 0.00 5.89 4.80 6.33 61.28 77.40 69.66 56 I21 Intron 0 1.80 1.02 3.85 1.28 2.44 2.31 7.25 3.48 4.05 2.42 18.91 0.47 0.61 0.13 0.00 0.00 0.00 2.28 4.51 6.36 26.27 26.16 36.96 57 I21_SR1 SilentIntronRegion 0 0.02 0.00 3.79 2.70 3.72 3.33 9.01 4.84 6.15 4.02 26.32 2.52 0.00 0.00 0.00 0.00 0.00 4.47 8.86 7.78 41.15 36.14 36.28 58 I21_AR1 ActiveIntronRegion 0 1.83 0.59 4.65 1.00 1.03 1.95 8.05 4.44 5.26 3.27 23.13 0.51 0.74 0.00 0.00 0.00 0.00 2.51 2.14 5.95 30.62 28.75 43.55 59 I21_AR7 ActiveIntronRegion 0 1.99 0.00 0.29 0.32 2.94 4.32 5.82 2.83 2.31 0.80 8.80 0.00 0.00 0.00 0.00 0.00 0.00 1.01 4.01 5.68 13.13 21.58 30.88 60 I21_AR8 ActiveIntronRegion 0 1.98 2.06 4.98 1.74 3.13 1.43 7.01 2.81 3.58 2.26 19.26 0.34 0.90 0.31 0.00 0.00 0.00 2.36 5.95 6.79 26.76 24.66 34.76 61 E22_Aa NovelBoundary 0 7.04 2.76 4.44 2.63 11.71 5.11 10.29 5.83 3.99 2.85 4.63 0.00 0.00 0.00 0.00 0.00 0.00 2.20 4.80 10.93 12.42 16.29 39.52 62 ER22a ExonRegion 0 7.26 0.00 7.27 2.76 3.71 11.88 5.39 6.44 8.67 4.07 3.73 0.79 0.53 1.81 0.00 0.00 0.00 0.00 3.84 0.77 114.64 40.58 59.80 63 E22_Da NovelBoundary 0 28.15 15.33 25.78 69.06 36.59 10.79 43.01 23.17 22.74 21.62 7.58 11.70 19.48 0.00 0.00 3.50 4.39 9.33 35.30 38.29 17.24 53.46 81.01 64 E22a_E23a KnownJunction 0 0.00 0.00 1.24 2.06 0.00 2.67 0.00 3.82 0.00 1.48 2.05 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 19.89 24.00 47.46 65 E22a_E24a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 1.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.03 9.31 11.44 66 I22 Intron 0 8.08 1.27 11.06 5.74 5.21 8.55 16.58 6.15 9.80 5.65 28.96 3.47 3.70 0.48 0.00 0.00 0.00 3.58 11.46 10.70 99.24 68.55 62.97 67 I22_SR1 SilentIntronRegion 0 8.09 1.27 11.07 5.75 5.21 8.56 16.59 6.15 9.81 5.65 28.98 3.47 3.70 0.48 0.00 0.00 0.00 3.58 11.47 10.71 99.31 68.60 63.01 68 Ix Intron 0 22.35 23.60 35.14 28.37 15.62 46.25 31.64 23.09 21.48 22.21 16.11 0.50 0.27 0.19 0.00 0.00 0.00 31.72 25.01 32.38 100.25 47.49 51.02 69 Ix_AR1 ActiveIntronRegion 0 19.34 17.10 56.08 33.04 7.83 39.22 25.41 25.89 22.21 20.62 23.31 0.65 0.00 0.49 0.00 0.00 0.00 56.91 24.46 37.34 190.44 52.16 66.56 70 Ix_SR1 SilentIntronRegion 0 24.25 27.64 22.35 25.56 20.44 50.67 35.54 21.42 21.08 23.23 11.72 0.40 0.43 0.00 0.00 0.00 0.00 16.31 25.40 29.40 45.02 44.71 41.57 71 E23_Aa NovelBoundary 0 35.34 18.15 16.88 18.05 7.72 69.90 53.04 34.63 23.38 37.20 19.16 0.00 0.00 0.00 0.00 0.00 0.00 34.16 43.95 49.15 109.10 95.40 34.40 72 ER23a ExonRegion 0 11.79 15.76 19.10 14.50 10.03 44.21 19.96 19.51 23.04 18.32 15.20 2.87 0.00 0.55 0.00 0.00 0.00 25.94 23.97 36.57 110.03 71.97 85.32 73 E23_Da NovelBoundary 0 14.15 15.33 13.87 12.09 27.67 59.40 52.33 22.96 41.55 29.95 11.27 0.00 0.00 0.00 0.00 0.00 0.00 31.26 34.35 59.06 38.36 49.97 51.90 74 E23a_E24a KnownJunction 0 3.48 0.00 3.90 0.00 0.00 5.51 1.77 3.86 6.60 2.47 12.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.90 58.66 55.49 75 Ix Intron 0 8.82 14.39 11.89 13.93 10.69 42.58 29.13 21.35 26.12 21.06 12.33 0.00 0.84 0.23 0.00 0.00 0.00 32.70 25.17 35.74 84.83 54.35 56.37 76 Ix_SR1 SilentIntronRegion 0 8.50 19.53 12.61 15.95 12.79 47.17 34.24 23.87 28.38 23.30 12.43 0.00 0.72 0.37 0.00 0.00 0.00 37.16 24.71 34.53 80.20 53.61 54.15 77 Ix_AR1 ActiveIntronRegion 0 3.26 2.03 4.24 6.19 6.59 22.29 12.53 8.78 12.26 7.50 1.49 0.00 0.00 0.00 0.00 0.00 0.00 15.07 3.92 10.31 54.92 23.88 26.88 78 Ix_AR2 ActiveIntronRegion 0 10.07 7.03 6.87 14.08 15.73 37.95 25.72 15.19 17.14 20.61 12.01 0.00 0.00 0.00 0.00 0.00 0.00 29.84 16.51 39.72 117.06 50.70 51.61 79 Ix_AR3 ActiveIntronRegion 0 9.92 12.54 9.52 14.01 10.08 44.92 30.98 21.93 26.86 20.23 15.42 0.00 0.67 0.00 0.00 0.00 0.00 27.66 31.69 35.58 88.01 53.71 67.02 80 Ix_SR2 SilentIntronRegion 0 7.78 7.74 18.00 13.47 7.98 35.07 19.64 20.46 26.51 21.57 10.77 0.00 1.17 0.33 0.00 0.00 0.00 30.35 26.52 41.46 93.30 64.43 59.18 81 Ix_AR4 ActiveIntronRegion 0 10.22 8.32 2.79 1.60 3.82 27.16 15.73 8.50 12.65 9.53 5.93 0.00 2.00 0.00 0.00 0.00 0.00 31.44 7.01 32.48 74.16 42.03 30.97 82 Ix Intron 0 10.18 11.31 22.72 16.49 6.63 16.66 11.58 12.02 14.09 11.21 14.32 0.28 0.82 0.03 0.00 0.00 0.00 33.31 12.23 21.51 122.42 61.82 57.72 83 Ix_AR1 ActiveIntronRegion 0 6.27 21.93 16.03 14.85 6.55 10.78 13.20 13.02 10.53 5.64 20.88 0.00 5.19 0.00 0.00 0.00 0.00 24.09 14.91 22.39 137.01 77.26 81.01 84 Ix_AR2 ActiveIntronRegion 0 6.14 11.14 16.75 13.12 6.47 16.06 8.61 10.08 11.70 12.22 8.71 0.59 0.29 0.10 0.00 0.00 0.00 32.55 10.09 17.08 92.67 47.73 48.27 85 Ix_SR1 SilentIntronRegion 0 6.00 4.41 20.08 14.39 0.59 20.78 8.61 10.18 8.51 16.38 16.75 0.00 0.00 0.00 0.00 0.00 0.00 21.97 5.66 7.09 118.02 38.66 52.70 86 Ix_AR3 ActiveIntronRegion 0 11.82 11.32 27.67 19.93 7.15 19.65 13.34 13.90 17.75 13.10 16.34 0.22 0.71 0.00 0.00 0.00 0.00 38.30 14.03 23.88 154.33 73.19 63.53 87 Ix_SR2 SilentIntronRegion 0 18.88 8.79 35.48 21.14 7.76 16.27 15.35 13.01 16.73 11.42 25.16 0.00 0.00 0.00 0.00 0.00 0.00 41.89 14.40 29.54 122.85 66.16 65.47 88 Ix_AR4 ActiveIntronRegion 0 11.11 4.46 11.85 8.48 3.59 10.54 7.86 8.20 5.99 2.81 4.35 0.00 0.00 0.00 0.00 0.00 0.00 11.13 6.60 17.38 67.12 41.12 30.66 89 E24_Aa NovelBoundary 0 265.90 2197.37 2171.95 1689.63 755.69 2724.68 1254.62 2463.01 2369.62 3104.62 4.79 0.00 0.00 0.00 0.00 0.00 0.00 3527.60 1533.69 3040.60 105.45 64.42 46.95 90 ER24a ExonRegion 0 30.65 168.22 85.33 60.50 43.50 88.57 71.34 78.76 88.01 73.84 13.60 0.69 0.00 0.00 0.00 0.00 0.00 56.84 40.66 91.67 69.44 91.66 52.30