Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MAN2B2 Gene 0 62.95 23.45 44.41 46.42 37.51 64.23 23.30 55.46 85.81 51.53 51.10 30.65 43.84 90.59 68.92 66.93 51.87 32.66 38.41 30.11 266.38 109.47 101.01 2 285599 Transcript 0 30.67 12.63 31.44 28.23 19.59 53.22 13.59 42.92 74.07 44.82 46.67 27.64 33.64 92.51 59.22 63.27 50.63 30.39 36.93 24.89 293.16 93.68 100.02 3 IG33_AR7 ActiveIntergenicRegion 0 0.00 1.94 2.54 0.79 0.00 67.75 0.63 0.00 12.14 3.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.99 0.00 4 IG33_AR9 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 51.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 15.53 2.98 4.16 1.55 3.34 8.59 5.72 3.66 7.85 10.20 12.83 1.02 0.81 11.44 11.55 8.13 19.98 2.60 4.19 2.69 66.45 25.00 12.39 6 E1a_E2a KnownJunction 1 0.00 0.00 7.04 3.46 3.74 7.44 2.21 12.94 27.14 10.15 35.85 17.26 5.84 25.72 14.71 7.60 39.27 2.57 4.80 11.95 170.13 24.86 27.57 7 ER2a ExonRegion 0 2.74 2.93 13.10 7.30 6.24 21.49 3.44 21.34 39.82 29.94 27.22 14.20 14.64 48.52 49.48 48.69 38.62 14.42 22.56 17.09 175.68 79.22 65.96 8 E2a_E3a KnownJunction 0 6.59 20.39 17.15 18.68 35.99 45.77 13.47 38.32 68.72 36.99 39.80 39.16 26.95 114.31 85.05 59.56 34.60 29.51 49.60 14.25 275.40 131.22 101.75 9 ER3a ExonRegion 0 9.36 15.44 16.28 11.44 12.29 61.40 16.35 35.45 66.85 39.14 54.69 18.87 32.83 80.61 52.11 58.49 41.29 21.84 29.06 27.94 312.93 96.69 66.82 10 E3a_E4a KnownJunction 0 40.75 8.42 20.61 10.92 7.98 44.63 8.30 25.06 51.56 44.24 42.43 23.56 47.24 85.00 50.56 79.21 29.83 25.41 63.34 10.87 353.92 68.89 85.19 11 E3a_E5a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 14.21 0.00 0.00 12 ER4a ExonRegion 0 23.94 6.88 20.75 17.54 9.11 35.87 7.27 34.43 70.89 43.19 37.06 26.50 52.13 92.77 57.99 73.86 42.99 34.12 38.37 24.89 292.62 97.91 113.14 13 E4a_E5a KnownJunction 0 25.41 5.46 21.05 22.44 34.21 56.16 3.80 46.41 69.73 42.68 30.80 37.81 48.05 83.82 49.57 100.57 64.61 33.20 63.06 17.71 278.37 92.03 86.73 14 ER5a ExonRegion 0 8.19 10.92 22.04 15.19 19.10 49.20 10.77 32.32 66.88 44.72 48.29 21.01 41.40 92.99 47.15 64.80 64.79 42.48 51.16 25.55 317.52 113.00 124.73 15 E5a_E6a KnownJunction 0 17.26 15.85 24.78 17.85 8.23 46.51 18.68 42.76 81.39 46.39 48.75 31.66 31.65 107.13 41.91 71.18 85.83 47.38 54.50 25.69 337.37 97.73 134.87 16 ER6a ExonRegion 0 16.81 7.21 26.60 26.82 7.37 48.59 12.72 47.73 78.89 46.59 55.47 36.65 61.50 116.44 59.95 74.12 62.62 36.22 53.24 29.80 373.70 111.27 140.99 17 E6a_E7a KnownJunction 1 7.48 0.00 45.00 44.32 11.46 61.95 6.18 67.73 103.64 60.90 56.91 48.62 109.90 147.21 54.39 71.52 60.31 47.80 65.79 31.64 438.56 120.39 132.57 18 ER7a ExonRegion 0 16.30 7.14 32.61 30.55 14.36 38.51 12.57 48.86 91.63 53.70 73.68 43.12 66.32 115.01 51.64 59.94 61.87 44.58 42.21 33.75 364.52 115.90 105.31 19 E7a_E8a KnownJunction 1 24.15 12.37 42.02 34.39 11.63 97.16 16.69 41.32 80.35 41.77 77.39 70.22 86.84 131.09 53.40 75.96 24.40 41.83 33.60 38.93 343.17 95.89 122.41 20 ER8a ExonRegion 0 17.96 5.31 25.20 22.86 9.20 50.25 8.37 37.19 62.84 44.29 38.58 35.75 37.54 103.05 38.93 57.36 38.80 38.20 22.15 22.56 272.69 89.18 100.98 21 E8a_E9a KnownJunction 0 24.37 3.35 16.88 18.71 7.64 27.26 12.37 39.72 78.70 33.79 28.90 12.15 14.77 97.18 59.46 70.67 47.50 24.79 28.24 24.10 330.14 90.93 102.52 22 E8a_E10a NovelJunction 0 0.00 2.89 1.54 2.06 0.00 16.07 0.00 6.82 3.21 0.00 0.00 0.00 8.28 2.47 13.35 0.00 0.00 2.57 0.00 0.00 5.81 5.69 0.00 23 ER9a ExonRegion 0 12.93 7.27 17.71 16.53 10.82 41.20 10.83 48.40 65.67 45.44 38.34 10.75 21.15 82.25 43.09 63.23 52.10 38.46 35.47 18.40 284.29 85.78 113.69 24 E9a_E10a KnownJunction 0 13.41 5.46 26.79 20.51 28.86 25.89 3.93 33.06 76.85 52.68 48.12 30.46 39.28 87.70 61.07 97.32 49.28 37.02 22.78 30.68 343.11 122.22 133.59 25 ER10a ExonRegion 0 16.33 7.62 39.23 18.12 11.42 45.20 11.91 51.52 73.01 53.61 50.57 24.17 26.64 93.28 54.73 72.24 57.05 35.38 41.48 26.74 337.68 99.81 109.53 26 E10a_E11a KnownJunction 0 27.93 18.88 24.10 13.02 16.13 91.14 19.74 42.59 71.30 54.37 54.01 39.76 13.64 80.11 41.66 85.79 35.25 42.24 57.32 12.27 304.38 95.34 91.08 27 E11_Aa NovelBoundary 0 7.56 0.00 3.13 8.92 0.00 11.36 4.28 3.94 6.13 13.08 2.16 0.00 6.01 2.47 0.00 0.00 4.77 17.99 8.66 8.76 5.44 7.96 15.54 28 ER11a ExonRegion 0 30.86 16.31 42.91 25.52 18.62 54.78 16.19 47.06 76.25 41.59 52.27 23.79 26.40 96.84 62.72 67.20 50.03 34.85 32.11 30.91 306.57 100.62 97.70 29 E11a_E12a KnownJunction 0 27.34 8.88 50.71 44.82 26.49 75.98 20.27 44.32 84.17 44.64 31.69 24.46 6.82 143.92 65.27 64.85 45.54 21.18 34.82 30.36 282.45 142.74 102.01 30 I11_AR1 ActiveIntronRegion 0 3.79 3.08 2.39 7.61 1.48 0.76 4.66 0.71 6.34 6.38 1.07 3.05 2.78 1.63 7.44 3.94 1.72 17.64 13.11 8.76 9.88 1.41 2.02 31 E12_Aa NovelBoundary 0 0.00 3.03 9.67 10.39 4.33 7.67 5.96 0.00 13.74 3.12 5.05 0.00 0.00 2.47 5.19 0.00 0.00 14.80 4.14 11.06 5.50 5.45 7.94 32 ER12a ExonRegion 0 25.63 14.44 46.60 41.08 22.80 64.45 23.48 56.49 77.21 50.69 56.40 18.96 22.47 103.89 76.78 60.26 40.20 32.29 41.61 33.18 311.64 113.24 101.44 33 E12a_E13a KnownJunction 0 45.93 20.98 38.17 49.71 64.09 77.17 25.79 45.10 106.48 42.95 60.80 42.91 20.29 156.51 66.88 64.51 49.56 33.33 47.25 29.98 387.41 165.82 162.96 34 I12_SR1 SilentIntronRegion 0 1.11 4.68 2.72 1.01 0.11 1.76 3.64 1.35 7.56 2.92 1.06 1.87 3.14 0.72 4.13 2.14 2.96 3.24 14.19 4.06 0.98 0.00 1.67 35 I12_AR1 ActiveIntronRegion 1 0.61 1.69 3.77 8.00 3.77 4.02 5.60 2.21 11.58 5.96 21.89 6.37 5.66 6.55 9.05 11.67 8.75 10.20 10.43 7.00 1.77 2.36 7.51 36 ER13a ExonRegion 0 27.31 13.39 44.37 36.90 24.52 58.63 15.48 50.79 100.86 45.46 48.38 22.64 35.22 104.12 65.19 68.36 43.88 38.24 43.24 37.50 325.64 105.03 128.39 37 E13_Da NovelBoundary 0 3.63 0.00 0.00 5.96 0.00 0.00 3.40 0.00 5.18 1.16 2.37 0.00 0.00 4.89 4.45 14.78 0.00 15.17 4.80 0.00 2.66 0.00 0.00 38 E13a_E14a KnownJunction 0 38.08 12.30 54.05 54.34 32.94 113.68 27.07 53.77 127.75 63.15 52.38 47.72 52.59 152.69 93.70 104.93 55.26 31.05 64.47 31.45 398.90 103.42 155.96 39 E14_Aa NovelBoundary 0 3.63 0.00 0.00 4.40 0.00 0.00 8.79 4.93 6.80 5.61 0.00 0.00 0.00 4.77 4.45 12.90 0.00 1.99 24.94 2.88 5.31 3.00 20.49 40 ER14a ExonRegion 0 20.59 13.21 33.20 30.22 22.32 80.52 15.10 54.86 92.07 58.56 54.66 37.13 40.14 91.65 67.17 68.23 65.81 32.78 53.49 38.11 329.39 93.05 93.66 41 E14a_E15a KnownJunction 0 36.30 9.47 12.27 42.45 22.75 36.00 17.80 59.72 80.24 56.81 48.80 23.26 19.48 71.46 75.16 56.40 56.47 36.44 27.58 23.59 296.04 101.46 112.76 42 ER15a ExonRegion 0 28.22 7.90 35.05 30.10 11.67 52.20 16.42 42.36 74.10 48.98 53.46 21.80 35.11 102.61 66.10 61.29 65.95 34.50 43.29 30.75 267.87 88.94 103.07 43 E15a_E16a KnownJunction 0 37.12 11.18 42.13 40.49 18.76 78.53 20.67 64.24 76.85 49.26 67.33 51.02 27.92 80.11 93.45 74.17 77.33 40.54 4.80 23.01 305.49 94.36 137.43 44 E16_Aa NovelBoundary 0 28.30 0.00 2.81 7.69 8.15 2.90 4.28 2.14 5.76 4.51 0.00 0.00 0.00 0.00 0.00 3.76 0.00 6.55 0.00 10.61 6.24 0.00 8.71 45 ER16a ExonRegion 0 29.88 11.38 43.88 36.23 19.99 68.49 12.44 48.37 77.29 47.75 47.89 16.85 44.01 111.29 67.61 64.18 60.11 37.28 36.26 30.10 296.40 83.48 95.31 46 E16a_E17a KnownJunction 0 87.35 6.58 48.19 28.50 24.11 72.40 9.98 46.50 70.05 42.60 50.75 18.61 26.13 88.35 66.75 39.14 63.49 18.36 41.70 20.13 243.28 73.17 85.53 47 E17_Aa NovelBoundary 0 28.67 6.38 9.96 25.44 0.00 13.63 6.54 6.86 10.07 3.17 0.00 0.00 0.00 0.00 4.57 8.12 0.00 22.47 13.08 14.70 7.72 0.00 0.00 48 ER17a ExonRegion 0 39.18 15.87 30.56 35.64 11.11 33.87 10.56 31.20 60.78 47.60 33.06 16.97 12.16 65.11 67.01 37.82 38.91 16.81 24.98 24.10 261.97 55.52 64.01 49 E17_Da NovelBoundary 0 50.97 41.05 24.69 33.06 19.69 29.24 12.37 28.14 47.80 24.69 22.06 5.55 20.29 54.04 33.50 15.89 4.39 31.21 32.38 21.80 27.61 36.62 51.47 50 E17a_E18a KnownJunction 0 42.75 12.10 22.62 14.82 7.30 23.91 1.90 26.90 44.96 36.45 30.06 6.30 0.00 32.32 19.90 27.17 48.99 9.49 3.76 15.66 249.77 46.17 54.03 51 I17 Intron 0 20.34 9.02 19.75 24.43 13.75 24.83 11.65 17.48 25.97 20.04 17.01 5.36 10.95 20.75 13.59 15.98 12.31 22.68 18.19 14.80 19.39 11.41 18.06 52 I17_AR1 ActiveIntronRegion 0 16.99 24.85 10.46 29.12 21.50 37.75 16.58 17.11 21.31 14.84 13.99 3.64 14.91 18.90 21.41 19.93 11.80 24.96 15.31 16.44 19.23 10.38 17.21 53 I17_SR1 SilentIntronRegion 1 13.31 16.21 9.35 17.50 11.97 42.09 24.98 8.81 17.27 10.18 16.57 8.01 8.48 26.23 11.17 15.35 4.17 7.35 11.36 10.22 16.97 8.56 26.30 54 I17_AR2 ActiveIntronRegion 1 26.51 10.00 21.76 26.52 15.50 27.70 12.25 22.04 27.04 23.88 24.93 5.14 15.42 24.45 14.15 20.03 10.39 23.31 23.84 14.76 19.28 13.75 23.12 55 I17_SR2 SilentIntronRegion 1 19.18 5.94 30.81 33.30 17.53 22.65 7.90 19.66 31.16 26.38 17.43 6.13 5.37 21.65 17.52 15.02 17.38 27.85 15.86 18.45 26.47 11.80 15.78 56 I17_AR3 ActiveIntronRegion 0 18.63 3.50 19.40 20.31 9.58 15.91 8.00 15.49 26.78 18.70 11.72 5.10 9.04 16.81 10.41 12.37 14.20 23.63 17.12 14.31 17.73 10.47 13.22 57 E18_Aa NovelBoundary 0 16.89 15.06 27.79 23.14 7.98 4.54 6.05 28.14 25.55 26.41 20.79 0.00 0.00 14.01 13.35 10.68 8.98 6.09 16.19 19.37 8.77 0.00 19.29 58 ER18a ExonRegion 0 64.11 25.49 41.86 38.75 10.18 34.70 9.96 31.51 65.52 44.58 45.83 12.22 14.51 84.84 75.90 53.32 43.28 23.74 22.03 29.12 212.34 48.86 71.43 59 E18_Da NovelBoundary 0 2.96 2.89 6.39 12.09 3.40 5.45 5.43 4.56 10.13 12.76 16.90 0.00 0.00 7.42 18.67 7.78 17.20 28.81 4.42 8.50 9.27 14.33 0.00 60 E18a_E19a KnownJunction 0 69.86 50.32 37.55 26.67 25.81 35.83 6.01 45.14 71.32 33.26 31.59 6.60 13.64 50.92 85.17 44.95 59.00 9.16 16.85 8.69 178.72 44.39 53.61 61 I18 Intron 0 10.51 2.50 15.12 14.32 5.43 8.62 4.88 10.45 10.62 10.77 7.64 3.46 0.83 9.65 10.28 15.24 10.40 16.77 18.88 15.91 11.77 6.90 11.92 62 I18_AR1 ActiveIntronRegion 0 5.00 2.24 16.27 16.12 4.78 6.71 4.62 11.12 10.46 10.91 7.41 3.70 0.99 10.50 9.05 16.70 11.66 19.61 18.34 15.23 11.81 5.85 7.75 63 I18_AR2 ActiveIntronRegion 1 85.75 7.50 19.92 18.30 28.97 56.74 22.20 13.68 17.50 11.70 20.65 0.00 0.00 16.52 31.67 30.57 15.18 19.11 33.76 32.04 16.18 21.19 48.24 64 I18_AR3 ActiveIntronRegion 0 12.50 2.61 13.22 11.06 4.17 7.03 3.46 9.49 10.78 11.37 7.16 3.80 0.69 7.91 10.99 11.75 7.86 12.04 19.50 16.31 12.22 7.83 16.76 65 E19_Aa NovelBoundary 0 56.01 24.93 27.82 37.09 7.72 0.00 12.50 10.47 19.39 18.70 24.27 6.30 6.82 11.77 15.20 7.86 13.00 29.27 8.00 9.14 14.15 11.94 11.52 66 ER19a ExonRegion 0 156.83 53.79 76.08 96.00 92.41 103.83 48.39 89.00 121.06 69.08 61.58 48.62 68.52 90.62 98.14 83.97 58.43 34.39 45.17 36.79 220.24 152.50 109.67 67 IG34_AR1 ActiveIntergenicRegion 0 13.00 13.65 11.73 18.11 16.82 3.67 3.97 8.64 9.35 14.42 5.80 4.33 11.39 1.62 0.00 5.94 0.94 7.39 11.38 19.45 0.00 2.08 3.36 68 IG34_AR2 ActiveIntergenicRegion 0 21.55 4.85 9.08 19.67 8.70 4.50 6.65 8.17 18.11 13.42 1.80 2.95 9.38 1.29 2.31 3.85 6.60 13.10 18.39 20.84 0.10 4.17 8.48 69 IG34_SR2 SilentIntergenicRegion 0 25.88 2.31 9.36 18.89 5.47 7.09 7.10 10.92 21.05 12.88 0.70 7.87 4.69 3.77 0.92 6.21 6.15 20.33 14.19 16.15 2.20 1.42 9.48 70 IG34_AR3 ActiveIntergenicRegion 0 7.49 8.18 8.69 9.58 3.63 2.88 5.80 5.60 12.16 7.75 4.04 6.87 1.15 4.58 4.23 3.22 4.09 19.05 6.21 17.87 4.22 2.14 6.09 71 IG34_SR3 SilentIntergenicRegion 0 1.77 0.00 0.76 0.00 7.83 3.07 2.77 0.00 3.85 0.00 0.81 5.75 3.00 5.75 4.42 4.97 1.38 4.62 26.63 1.78 0.00 0.87 3.68