Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PPP1R2	Gene	0	64.62	36.42	25.95	29.69	53.73	28.29	32.34	33.97	43.73	26.28	38.60	55.16	67.67	58.12	64.87	37.24	43.43	21.34	12.29	30.37	22.68	41.96	23.36
2	462906	Transcript	0	94.65	24.03	26.41	36.24	51.86	10.01	24.88	40.64	29.62	27.93	6.68	17.26	23.49	16.01	29.59	19.30	15.64	13.39	11.12	15.92	5.74	10.15	14.39
3	328432	Transcript	0	4.19	1.40	1.33	1.16	1.74	1.52	0.55	1.00	1.14	0.53	0.25	1.15	0.10	0.38	0.85	0.38	0.17	0.14	0.58	0.44	0.00	0.38	0.15
4	438848	Transcript	0	7.48	6.45	0.00	2.06	0.00	8.63	0.00	0.00	1.77	2.50	9.53	0.00	13.64	2.47	4.45	0.00	4.77	7.21	0.00	3.26	0.00	2.76	0.00
5	413183	Transcript	0	27.95	21.98	7.08	5.47	15.94	3.62	5.75	5.42	3.26	2.20	1.60	2.61	6.90	5.23	3.83	4.52	1.55	0.88	0.75	1.75	1.68	3.40	0.36
6	418939	Transcript	0	3.78	2.50	0.00	1.56	0.00	0.00	1.94	6.16	3.94	3.89	4.63	0.00	5.84	7.06	10.26	7.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	460437	Transcript	0	30.18	9.73	12.71	19.14	43.20	10.43	20.30	17.14	16.22	6.33	9.18	25.27	36.44	14.98	13.33	10.62	14.82	1.86	2.95	12.20	1.35	14.43	2.23
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.39	0.00	0.00	2.23	0.00	0.00	0.00	0.00	1.96	0.00
9	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.33	0.00	0.00	0.00	0.00	4.59	0.00	0.00	4.77	0.00	0.00	0.00	0.00	3.12	0.00
10	ER1b	ExonRegion	1	42.31	14.09	13.63	10.62	18.20	40.32	18.40	8.82	19.03	14.48	47.28	5.91	6.13	70.79	68.54	58.47	45.35	33.55	13.64	29.25	62.34	27.80	44.61
11	E1_Ac	KnownBoundary	1	3.11	3.09	12.39	5.99	0.00	5.68	6.14	14.17	37.64	20.93	96.02	12.45	0.00	38.20	40.79	23.41	84.34	19.15	4.61	13.93	104.09	13.47	11.95
12	ER1c	ExonRegion	0	42.50	51.61	37.23	35.47	37.74	60.20	33.93	44.99	79.89	49.43	103.81	51.36	68.50	185.28	171.80	92.62	113.74	81.94	25.51	74.05	111.66	75.62	81.74
13	E1a_E2a	KnownJunction	0	197.07	193.39	76.14	72.55	135.14	149.23	119.86	96.77	138.28	95.66	181.36	149.00	119.96	303.96	254.78	160.30	228.80	130.95	49.13	133.40	141.84	117.69	93.05
14	I1	Intron	0	16.08	4.03	7.53	4.82	9.56	0.70	7.93	6.30	5.87	3.41	1.05	4.98	6.53	2.19	6.96	4.16	4.19	1.44	3.30	3.34	0.44	1.07	2.51
15	I1_SR1	SilentIntronRegion	0	13.53	4.04	11.73	4.76	7.88	0.48	5.48	6.56	5.75	3.79	1.30	5.13	6.11	2.72	5.71	4.33	4.80	2.35	2.95	3.74	0.39	0.64	2.06
16	I1_AR1	ActiveIntronRegion	1	4.73	6.70	13.41	12.75	1.57	0.00	6.93	9.96	6.90	10.39	1.93	10.70	0.00	0.00	11.78	5.24	23.30	3.15	3.19	8.51	0.00	0.00	5.87
17	I1_AR2	ActiveIntronRegion	0	18.52	2.78	9.56	7.81	12.91	0.87	7.51	7.17	5.10	5.77	1.01	3.71	3.66	2.39	3.78	4.78	8.02	0.54	4.82	4.51	0.00	0.99	1.99
18	I1_SR2	SilentIntronRegion	0	16.76	4.13	5.96	4.54	9.86	0.76	8.78	6.12	5.98	3.03	0.97	5.01	6.97	2.01	7.64	4.04	3.54	1.22	3.28	3.08	0.50	1.22	2.69
19	E2_Aa	NovelBoundary	0	60.01	14.34	15.23	13.88	15.87	0.00	18.95	22.63	6.22	6.77	0.00	11.85	18.67	2.35	18.79	3.59	0.00	0.00	0.00	6.26	0.00	0.00	4.27
20	ER2a	ExonRegion	0	183.62	171.12	71.76	78.12	190.57	130.56	141.05	120.11	177.31	109.35	186.78	165.26	211.85	327.28	265.78	180.65	251.59	153.81	66.89	128.28	153.99	116.42	119.61
21	E2_Ab	KnownBoundary	0	222.11	189.77	94.44	98.96	383.96	145.83	195.95	169.14	233.56	136.40	164.62	203.47	276.44	320.97	300.27	178.76	249.56	173.07	76.52	136.91	165.25	126.08	114.22
22	ER2b	ExonRegion	0	205.37	142.71	87.59	108.22	252.44	138.05	122.44	163.17	207.94	121.50	243.55	186.81	275.80	384.46	280.04	265.14	283.83	182.13	75.64	169.86	201.03	190.13	175.15
23	E2_Da	KnownBoundary	0	61.49	16.05	13.04	37.99	66.64	7.78	6.40	50.23	14.76	19.61	7.48	13.05	0.00	20.43	8.90	11.88	0.00	10.24	3.67	8.88	5.81	5.76	4.35
24	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E2a_E4a	KnownJunction	0	185.14	132.21	95.00	86.67	121.65	112.26	81.13	126.43	190.45	93.99	254.70	265.14	433.90	432.87	354.66	221.14	246.94	179.99	24.57	165.99	183.11	145.92	173.63
26	E2a_E5a	KnownJunction	0	7.48	6.45	0.00	2.06	0.00	8.63	0.00	0.00	1.77	2.50	9.53	0.00	13.64	2.47	4.45	0.00	4.77	7.21	0.00	3.26	0.00	2.76	0.00
27	ER2c	ExonRegion	0	94.65	24.03	26.41	36.24	51.86	10.01	24.88	40.64	29.62	27.93	6.68	17.26	23.49	16.01	29.59	19.30	15.64	13.39	11.12	15.92	5.74	10.15	14.39
28	E2b_E6b	NovelJunction	0	2.82	0.00	0.00	0.00	0.00	2.21	0.00	0.00	0.00	0.00	13.16	0.00	0.00	0.00	0.00	0.00	0.00	20.85	0.00	0.00	0.00	2.33	0.00
29	I2	Intron	0	59.80	16.16	13.39	16.15	39.55	3.59	12.79	10.08	12.83	3.34	1.89	13.39	26.39	5.64	9.25	6.91	3.23	1.24	3.12	5.46	0.00	5.61	4.67
30	I2_SR1	SilentIntronRegion	1	54.46	9.28	8.34	15.66	35.70	2.73	11.98	5.48	12.02	2.49	2.03	13.20	38.55	5.15	3.33	6.02	2.74	0.00	7.46	4.88	0.00	2.90	6.88
31	I2_AR1	ActiveIntronRegion	0	75.49	22.31	18.39	21.37	52.25	4.86	16.27	13.95	17.04	4.54	2.48	17.70	30.30	6.31	11.95	9.24	3.74	1.82	2.92	6.91	0.00	7.41	5.84
32	E3_Aa	NovelBoundary	1	47.49	27.36	32.02	37.02	113.16	4.71	38.42	33.06	21.01	12.54	0.00	25.06	7.47	17.07	4.45	7.18	0.00	0.00	3.67	3.26	2.29	5.63	11.44
33	ER3a	ExonRegion	0	83.86	65.93	21.25	16.41	47.81	10.86	17.24	16.26	8.19	6.61	4.79	7.82	20.70	15.69	11.48	13.57	4.64	2.63	2.24	5.24	1.90	10.19	1.07
34	E3_Da	NovelBoundary	0	30.97	28.28	13.60	22.21	38.62	5.00	8.79	10.31	10.33	7.58	2.68	0.00	12.66	9.77	8.90	7.78	8.70	4.48	9.32	6.01	3.15	2.51	16.99
35	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.15	0.00	0.00
36	I3	Intron	0	26.22	16.71	12.75	17.46	40.09	4.76	18.21	15.69	13.16	8.88	4.03	13.51	23.28	10.03	12.92	8.60	7.45	4.58	2.59	7.16	1.78	6.48	4.25
37	I3_SR1	SilentIntronRegion	0	24.02	12.93	10.78	12.29	38.46	2.50	14.43	12.87	10.86	9.83	4.39	9.75	13.24	16.37	11.65	13.49	7.99	4.87	5.82	5.15	1.67	5.05	5.78
38	I3_SR2	SilentIntronRegion	0	27.17	18.24	13.56	19.55	40.87	5.67	19.75	16.85	14.11	8.53	3.91	15.03	27.30	7.56	13.46	6.71	7.26	4.49	1.33	7.96	1.83	7.06	3.67
39	E4_Aa	NovelBoundary	0	34.23	31.64	23.39	41.69	29.71	2.90	6.32	24.40	13.19	11.66	14.32	0.00	26.62	11.71	32.63	33.07	8.51	13.31	0.00	26.53	5.56	2.76	16.82
40	ER4a	ExonRegion	0	162.62	110.15	96.36	95.66	141.92	89.03	88.71	124.27	201.43	105.43	221.71	298.51	335.34	445.03	423.14	279.57	236.65	180.63	74.82	176.54	182.29	212.52	150.52
41	E4_Da	NovelBoundary	0	50.08	19.21	26.34	22.77	39.81	5.79	7.51	9.90	14.06	12.89	2.68	17.86	20.29	7.36	13.35	12.90	8.23	10.57	0.00	2.68	0.00	5.94	3.59
42	E4a_E5a	KnownJunction	0	165.29	117.35	111.00	126.86	182.43	100.28	92.26	155.51	215.59	117.09	238.80	276.09	229.21	481.73	346.50	169.53	271.43	173.73	66.64	194.76	190.58	219.15	117.89
43	E4a_E6b	KnownJunction	0	3.78	2.50	0.00	1.56	0.00	0.00	1.94	6.16	3.94	3.89	4.63	0.00	5.84	7.06	10.26	7.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	I4	Intron	0	25.17	10.45	7.30	10.24	17.57	2.44	11.34	6.62	6.65	4.55	2.39	4.41	9.95	7.50	11.81	13.01	8.81	4.46	4.24	4.45	2.52	2.97	6.15
45	I4_SR1	SilentIntronRegion	0	16.43	13.69	8.30	7.35	13.37	1.84	8.51	5.59	6.62	3.75	1.10	5.84	2.61	4.98	11.81	14.13	6.40	4.51	6.14	5.11	2.97	2.53	4.48
46	I4_SR2	SilentIntronRegion	0	37.30	9.68	9.56	11.72	27.24	2.37	13.53	10.66	6.03	2.57	3.93	3.83	18.71	16.00	10.23	17.14	14.59	7.53	5.70	4.26	2.99	4.54	8.75
47	I4_AR1	ActiveIntronRegion	0	34.12	5.35	4.21	14.70	19.37	3.62	15.25	5.93	7.27	7.31	3.82	2.32	18.15	7.01	13.14	8.80	9.77	2.42	0.00	3.50	1.45	2.74	7.73
48	E5_Aa	NovelBoundary	0	28.15	6.12	3.25	17.41	15.20	5.34	27.38	21.85	16.23	5.40	5.05	7.65	6.98	4.47	13.35	19.57	4.11	2.57	0.00	2.94	5.68	8.57	16.13
49	ER5a	ExonRegion	0	129.82	94.47	118.27	112.90	161.02	124.95	110.22	128.82	196.60	110.19	210.18	219.25	237.81	273.52	269.85	166.63	238.98	99.45	47.21	143.54	155.19	150.69	93.54
50	E5_Da	NovelBoundary	0	10.37	17.10	3.55	14.58	27.84	0.00	10.86	14.50	19.76	6.04	10.16	5.70	42.85	12.24	9.39	8.03	11.22	1.82	0.00	21.67	2.47	13.90	7.43
51	E5a_E6b	KnownJunction	0	166.10	73.47	86.19	86.04	170.71	110.28	165.52	97.30	183.42	121.68	111.29	153.35	245.76	322.09	325.48	200.72	155.03	37.10	41.51	140.30	53.19	116.71	111.23
52	I5_AR1	ActiveIntronRegion	0	12.65	9.12	5.45	15.18	22.99	2.74	11.87	6.74	9.63	3.83	3.61	21.22	35.77	7.96	7.49	7.22	5.55	0.00	1.19	4.77	0.82	5.06	1.65
53	E6_Aa	NovelBoundary	1	19.78	8.62	4.26	7.26	28.01	2.21	22.52	31.46	7.78	6.63	0.00	24.31	27.11	14.30	0.00	8.37	4.77	0.00	0.00	3.07	0.00	18.13	0.00
54	ER6a	ExonRegion	0	30.18	9.73	12.71	19.14	43.20	10.43	20.30	17.14	16.22	6.33	9.18	25.27	36.44	14.98	13.33	10.62	14.82	1.86	2.95	12.20	1.35	14.43	2.23
55	E6_Ab	KnownBoundary	0	37.04	13.22	9.05	25.30	40.66	14.65	30.16	11.62	14.93	7.52	0.00	21.16	27.43	13.77	14.09	14.95	29.36	4.02	0.00	10.87	0.00	2.76	0.00
56	ER6b	ExonRegion	0	192.69	126.93	127.39	144.86	293.66	171.00	180.83	168.45	276.20	151.25	217.13	282.14	392.59	386.41	328.81	284.33	257.88	64.52	66.63	184.13	69.78	264.17	139.37
57	ER6c	ExonRegion	0	210.23	162.83	122.43	117.44	239.13	146.93	163.11	153.98	241.25	130.85	255.70	334.34	409.31	317.45	367.14	194.89	274.55	86.25	60.90	158.44	65.37	281.57	99.29
58	E6b_E7a	KnownJunction	1	240.41	183.06	122.05	122.89	198.64	123.11	143.04	163.84	245.66	151.45	259.43	272.49	486.01	86.82	176.03	77.33	274.52	48.58	25.32	143.81	40.09	130.43	41.66
59	ER7a	ExonRegion	1	221.76	181.55	121.58	119.86	209.75	131.83	123.57	145.67	242.77	147.44	261.05	331.20	413.76	181.36	206.63	98.41	260.59	46.19	33.45	148.70	46.77	213.79	63.79
60	ER7b	ExonRegion	0	208.62	154.94	115.26	135.35	252.55	118.29	148.18	140.55	209.54	104.54	166.94	383.31	439.71	184.78	289.75	106.18	155.99	35.49	38.42	119.50	32.40	264.59	65.10
61	E7_Db	KnownBoundary	1	122.32	103.53	67.21	102.68	145.25	45.31	103.03	86.75	111.34	62.05	21.74	255.08	280.01	94.89	262.56	69.13	44.23	14.05	13.46	49.66	2.35	138.82	23.90
62	ER7c	ExonRegion	0	135.28	89.29	6.96	13.76	60.20	39.39	54.48	12.63	14.68	7.05	1.77	54.32	77.46	21.23	33.72	6.86	2.84	1.80	1.78	11.41	0.05	20.71	4.20
63	E7_Dc	KnownBoundary	0	57.57	19.60	5.56	9.69	11.97	5.11	4.02	14.33	4.69	4.35	6.84	5.25	6.17	0.00	0.00	0.00	0.00	0.00	0.00	2.88	0.00	0.00	0.00
64	ER7d	ExonRegion	0	4.19	1.40	1.33	1.16	1.74	1.52	0.55	1.00	1.14	0.53	0.25	1.15	0.10	0.38	0.85	0.38	0.17	0.14	0.58	0.44	0.00	0.38	0.15