Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PIGX	Gene	0	30.47	68.80	47.92	44.75	67.08	40.41	38.74	41.33	54.78	38.26	30.55	66.41	65.32	83.04	52.02	46.70	51.83	33.71	50.41	50.71	8.01	57.32	30.69
2	426755	Transcript	0	2.25	0.00	0.00	0.34	0.00	0.00	0.13	0.00	0.00	0.00	0.39	0.30	0.00	1.29	2.96	0.01	0.51	0.00	0.00	0.00	0.00	0.00	0.00
3	392391	Transcript	0	1.45	3.56	3.40	1.47	7.36	4.77	3.64	1.39	3.47	3.52	1.45	1.79	1.37	4.32	9.26	4.08	5.78	5.07	1.62	2.65	0.12	1.87	0.98
4	314118	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	296333	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	457284	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	453218	Transcript	0	4.31	13.82	10.43	8.06	10.79	33.84	14.00	15.58	20.38	9.49	14.82	15.39	11.39	24.65	10.39	17.84	27.90	11.09	19.84	10.43	4.05	14.47	9.43
8	421265	Transcript	0	6.89	64.96	24.96	29.50	20.29	16.29	23.40	18.55	23.48	15.36	6.90	9.22	12.50	12.02	9.53	15.81	9.53	7.97	9.17	25.71	0.00	9.93	5.56
9	415832	Transcript	0	0.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.90	2.43	3.00	0.00	0.00	0.00	0.00	0.00	0.00
10	451319	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	495440	Transcript	0	0.25	1.96	4.19	3.14	2.83	3.36	2.32	4.17	4.03	0.80	0.92	4.03	5.00	5.35	3.97	3.37	2.57	0.54	3.87	4.51	2.65	2.71	1.93
12	ER1a	ExonRegion	0	1.07	0.00	0.00	0.00	0.00	0.00	0.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	Ix	Intron	0	13.58	0.75	1.70	1.25	4.64	0.87	1.74	2.71	2.65	0.82	12.26	11.35	11.10	6.59	17.89	39.80	11.82	1.66	1.74	1.57	0.33	0.79	2.87
15	Ix_AR1	ActiveIntronRegion	0	16.22	1.07	2.57	1.39	5.31	0.81	3.15	2.41	3.59	1.02	14.62	14.69	13.42	6.76	21.67	47.83	16.14	2.74	2.20	2.69	0.08	0.37	3.04
16	Ix_SR2	SilentIntronRegion	0	13.74	0.83	1.30	1.38	4.76	0.93	1.64	2.89	2.59	0.61	11.95	11.92	11.44	6.42	18.03	40.47	10.79	1.36	1.61	1.47	0.32	0.95	2.71
17	Ix_AR2	ActiveIntronRegion	0	12.62	0.00	2.52	0.46	3.51	0.20	0.84	2.24	1.80	2.49	9.38	3.82	1.78	6.14	16.76	27.24	10.44	1.42	1.20	0.24	0.98	0.98	3.31
18	Ix_SR3	SilentIntronRegion	0	10.52	0.00	2.70	1.45	6.35	0.56	0.81	2.34	1.35	1.53	16.57	3.36	20.57	11.21	21.20	37.35	12.71	2.94	3.74	1.81	0.68	1.13	4.40
19	Ix_SR4	SilentIntronRegion	0	13.10	0.18	2.92	0.81	4.42	1.28	0.69	3.35	3.12	0.90	13.48	10.69	10.71	7.68	9.88	33.29	12.54	2.38	1.84	0.96	0.39	0.55	3.33
20	ER2a	ExonRegion	0	1.22	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.50	0.00	0.72	2.78	0.07	2.56	0.00	0.00	0.00	0.00	0.00	0.00
21	E2a_E5a	KnownJunction	0	6.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.47	8.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	Ix	Intron	1	19.84	1.57	3.06	3.25	6.63	1.95	2.36	3.36	2.65	1.05	25.84	26.74	20.71	27.65	29.25	82.40	24.88	1.71	3.05	2.10	0.47	2.00	6.65
23	Ix_SR1	SilentIntronRegion	0	19.85	1.57	3.07	3.25	6.63	1.95	2.36	3.36	2.65	1.05	25.85	26.76	20.72	27.66	29.26	82.44	24.89	1.71	3.06	2.10	0.47	2.00	6.65
24	E3_Aa	NovelBoundary	0	3.41	0.00	3.67	0.00	0.00	15.96	2.25	0.00	5.27	1.42	7.84	5.40	0.00	14.83	15.45	0.00	8.42	6.92	4.33	3.13	3.15	0.00	12.89
25	E3_Ab	NovelBoundary	0	3.19	5.72	0.00	0.00	0.00	54.68	6.76	0.00	6.54	5.96	7.42	0.00	0.00	16.07	31.15	14.53	44.51	33.12	8.75	9.52	6.24	14.70	7.94
26	ER3a	ExonRegion	0	1.53	3.50	0.41	0.76	0.30	5.40	1.69	0.00	0.55	1.91	1.40	0.00	1.30	3.70	2.26	5.45	11.55	8.93	2.12	0.12	0.24	2.20	1.96
27	ER3b	ExonRegion	0	2.12	9.32	3.54	2.39	2.68	23.38	5.66	0.00	1.24	6.50	10.09	3.49	4.69	16.74	1.77	20.89	21.00	26.64	9.82	6.50	2.20	4.17	4.89
28	E3_Ac	KnownBoundary	0	0.00	9.27	5.41	3.93	3.82	44.75	13.87	0.00	1.79	12.25	12.79	5.55	0.00	21.01	0.00	27.34	21.22	48.87	14.31	9.08	2.78	0.00	8.62
29	ER3c	ExonRegion	0	0.28	2.20	4.42	1.41	2.98	10.02	5.22	3.34	3.50	6.50	11.52	2.41	1.35	12.26	6.39	21.34	37.31	25.62	16.76	6.84	6.64	2.64	13.11
30	E3_Ad	KnownBoundary	0	3.56	0.00	5.88	0.00	0.00	0.00	2.25	4.52	6.13	12.79	12.37	6.30	0.00	33.20	26.58	39.48	38.15	26.24	23.53	12.02	8.90	20.57	18.10
31	ER3d	ExonRegion	1	4.77	7.28	10.06	2.79	1.99	1.19	3.45	9.49	10.69	8.35	12.68	1.51	1.96	69.04	15.52	28.68	47.90	14.78	11.63	24.74	11.94	15.55	18.85
32	E3_Ae	KnownBoundary	1	7.11	24.93	15.40	6.53	4.33	7.21	8.92	21.73	26.56	11.68	18.27	0.00	6.82	87.41	14.46	39.05	72.56	23.71	9.04	31.64	11.31	16.78	19.63
33	ER3e	ExonRegion	1	5.16	23.21	17.21	8.04	3.07	15.92	7.33	16.48	25.21	12.76	12.45	0.00	7.55	92.42	23.42	55.24	51.45	26.23	12.12	23.20	8.12	12.40	33.09
34	E3a_E5a	KnownJunction	0	7.26	19.08	23.98	13.58	3.99	54.74	10.33	25.10	36.43	16.28	14.85	0.00	20.45	103.36	52.91	97.32	50.86	66.49	32.47	35.67	6.05	5.14	75.29
35	ER4a	ExonRegion	0	0.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.90	2.43	3.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER4b	ExonRegion	0	6.04	2.33	1.55	0.00	2.28	0.00	2.10	0.00	0.75	1.29	2.88	0.00	1.03	2.85	3.33	3.48	5.23	0.95	0.85	0.00	0.81	0.05	2.79
37	E4_Ac	KnownBoundary	0	9.48	2.76	4.67	0.00	4.07	0.00	5.92	2.55	2.89	4.86	5.26	0.00	6.33	9.42	4.45	3.76	4.77	4.31	0.00	0.00	2.78	0.00	7.34
38	ER4c	ExonRegion	0	2.05	9.36	10.90	8.44	8.35	11.12	5.00	4.91	11.36	11.70	6.10	5.62	5.25	14.84	10.76	10.56	15.35	14.71	17.65	9.36	1.48	5.98	9.04
39	E4a_E5a	KnownJunction	0	0.00	21.44	22.35	11.55	4.07	21.35	11.84	1.56	18.55	11.36	4.69	0.00	6.33	31.14	8.90	8.12	8.60	7.79	24.75	8.50	5.68	13.41	0.00
40	ER5a	ExonRegion	0	19.08	68.92	57.34	38.42	28.14	87.62	51.45	44.45	70.90	39.37	63.63	37.21	47.93	151.27	62.97	137.93	116.46	70.73	126.17	72.17	19.97	70.61	72.04
41	E5a_E6a	KnownJunction	0	0.00	3.35	2.84	1.43	3.82	2.90	0.00	4.81	2.78	0.00	0.00	0.00	6.82	4.77	9.89	4.36	0.00	0.00	4.80	0.00	3.15	0.00	4.35
42	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	3.90	37.65	0.00	15.65	1.79	2.55	0.00	0.00	0.00	0.00	4.94	0.00	3.65	0.00	0.00	0.00	0.00	0.00	0.00
43	E5a_E8b	KnownJunction	0	28.67	128.86	75.75	60.23	33.28	80.64	94.99	54.59	90.91	50.18	109.29	65.57	82.46	157.22	69.23	153.46	187.00	80.88	136.76	61.36	19.52	99.57	57.36
44	ER6a	ExonRegion	0	0.74	2.52	6.85	5.92	4.67	7.17	6.96	5.97	4.94	2.39	2.75	12.10	8.19	7.03	2.01	5.76	4.43	1.62	2.29	7.72	1.66	2.24	1.43
45	E6a_E8b	KnownJunction	0	0.00	0.00	2.90	2.06	0.00	0.00	0.00	1.73	4.37	0.00	0.00	0.00	0.00	4.24	0.00	0.00	3.27	0.00	4.52	5.82	3.15	5.88	0.00
46	ER7a	ExonRegion	0	2.42	3.41	0.07	4.31	9.83	23.43	6.34	12.09	13.04	3.89	1.31	3.10	5.68	7.66	3.26	1.50	3.96	0.00	1.33	6.62	1.87	0.59	1.03
47	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	E7a_E8b	NovelJunction	0	0.00	0.00	0.00	2.06	3.74	43.38	6.18	8.05	20.25	6.98	2.68	0.00	0.00	4.65	0.00	3.59	8.04	0.00	4.80	0.00	0.00	0.00	4.01
49	ER8a	ExonRegion	0	14.82	51.86	41.66	27.94	29.43	74.27	49.65	34.57	66.70	31.54	57.99	58.45	39.87	90.95	33.36	69.84	103.98	44.35	78.04	35.11	14.32	57.30	36.71
50	ER8b	ExonRegion	0	33.26	124.61	72.94	74.16	88.07	112.10	72.82	88.05	130.81	76.57	110.83	122.08	86.35	253.54	84.61	130.73	219.22	90.54	149.69	124.67	26.71	103.61	84.06
51	E8a_E9a	KnownJunction	0	3.78	42.62	32.49	37.26	26.99	48.15	10.16	35.12	28.41	17.94	11.32	12.60	0.00	21.48	0.00	11.11	40.95	20.77	62.68	66.60	2.66	11.76	3.33
52	E8a_E10a	KnownJunction	0	63.79	81.50	45.95	53.17	124.45	100.23	44.87	52.00	119.15	62.21	91.50	133.84	125.15	221.20	91.97	150.90	214.96	36.06	162.08	102.78	37.07	157.55	103.20
53	I8	Intron	0	1.79	4.98	2.47	4.52	5.05	2.84	5.74	2.97	4.45	3.27	2.99	8.54	15.21	3.86	2.38	5.10	4.65	2.43	2.69	7.73	0.43	1.70	1.07
54	I8_SR1	SilentIntronRegion	0	1.79	4.98	2.47	4.52	5.05	2.84	5.74	2.97	4.46	3.27	2.99	8.55	15.22	3.86	2.38	5.11	4.65	2.44	2.69	7.73	0.43	1.70	1.08
55	E9_Aa	NovelBoundary	0	6.74	0.00	3.52	15.32	0.00	19.65	1.72	0.00	9.72	4.59	2.68	6.30	6.49	7.12	9.77	3.33	16.74	6.84	0.00	10.61	0.00	0.00	0.00
56	ER9a	ExonRegion	0	7.49	57.31	27.67	44.03	28.75	38.07	33.10	19.07	28.96	14.51	13.37	29.23	23.05	23.27	6.00	22.08	31.63	31.65	50.67	52.94	2.15	10.49	4.94
57	E9a_E10a	KnownJunction	0	3.78	53.94	13.45	54.11	31.41	78.82	69.03	24.56	45.72	22.81	12.37	6.15	13.64	17.19	6.30	41.44	20.85	38.14	90.83	83.80	0.00	24.80	15.28
58	E10_Aa	NovelBoundary	0	3.78	42.49	6.80	9.12	21.22	0.00	9.32	14.99	12.59	2.44	2.68	0.00	15.10	0.00	4.94	8.46	17.95	9.33	4.80	5.75	3.03	0.00	0.00
59	ER10a	ExonRegion	0	52.21	169.67	115.68	122.34	135.63	115.53	86.61	96.43	132.54	89.84	124.68	169.38	154.89	324.17	133.46	178.38	216.42	108.68	202.87	143.13	29.61	157.26	86.11
60	E10_Da	KnownBoundary	0	60.46	193.72	174.83	143.84	86.76	61.39	86.21	87.94	121.70	87.89	69.28	119.59	131.16	299.96	171.95	140.13	130.53	119.10	192.38	146.69	36.45	97.12	78.19
61	ER10b	ExonRegion	0	64.02	209.65	141.15	124.96	128.14	111.23	100.57	101.17	148.15	86.41	82.40	209.83	151.11	342.22	149.12	117.54	157.72	110.23	152.68	149.49	34.57	169.36	90.23
62	E10_Db	KnownBoundary	0	83.35	264.10	164.99	95.56	165.87	120.95	97.38	102.56	150.78	76.26	92.97	230.48	137.33	336.98	184.07	154.66	167.27	139.74	180.43	164.59	23.60	186.76	105.17
63	E10_Dc	KnownBoundary	0	7.04	112.28	31.87	45.28	53.57	33.11	45.93	26.37	27.31	16.87	5.21	18.91	6.82	11.83	0.00	15.38	13.46	6.76	0.00	31.70	0.00	2.33	0.00
64	E10c_E11a	KnownJunction	0	0.00	51.50	36.07	33.70	36.25	39.69	8.83	22.80	38.40	23.40	8.00	0.00	6.82	2.47	0.00	0.00	0.00	14.22	0.00	23.20	2.90	0.00	0.00
65	E10c_E12a	KnownJunction	0	47.86	108.86	112.39	42.69	106.37	46.73	107.40	40.01	45.69	33.12	91.13	169.86	166.06	287.95	188.02	145.00	136.04	105.29	190.12	99.39	28.36	107.65	87.92
66	ER10c	ExonRegion	0	58.12	261.16	173.06	118.15	172.38	130.06	124.35	101.31	146.88	79.09	104.08	224.63	171.01	322.76	180.10	169.41	163.01	146.97	187.81	161.13	30.51	148.97	101.88
67	ER10d	ExonRegion	0	6.89	64.96	24.96	29.50	20.29	16.29	23.40	18.55	23.48	15.36	6.90	9.22	12.50	12.02	9.53	15.81	9.53	7.97	9.17	25.71	0.00	9.93	5.56
68	E10_Dd	NovelBoundary	0	6.37	24.21	4.11	17.05	11.63	9.88	1.94	7.39	6.02	10.40	4.90	0.00	6.82	4.59	5.19	22.90	13.37	15.13	0.00	9.33	0.00	0.00	15.45
69	ER11a	ExonRegion	0	0.00	36.30	21.04	28.07	33.69	33.18	10.20	19.30	43.85	24.93	6.91	6.33	2.78	11.34	1.07	10.02	5.99	12.87	13.15	26.08	3.26	5.75	0.00
70	E11a_E12a	KnownJunction	0	0.00	53.28	15.35	30.50	51.53	23.11	10.91	14.66	54.14	18.29	5.16	20.26	6.82	9.89	8.90	8.20	8.60	13.14	7.72	35.67	0.00	4.78	0.00
71	E12_Aa	NovelBoundary	0	0.00	5.72	10.35	26.44	29.63	0.00	15.77	6.28	2.86	6.15	0.00	0.00	0.00	4.71	4.45	4.02	3.46	4.73	13.27	10.61	0.00	0.00	0.00
72	ER12a	ExonRegion	0	29.46	143.88	106.07	61.41	118.63	69.59	63.93	52.56	75.59	47.35	80.57	131.47	157.74	252.11	139.03	116.88	148.77	100.38	127.16	82.20	24.74	100.77	64.84
73	E12a_E13a	KnownJunction	1	24.15	168.65	62.48	45.35	124.87	84.61	55.91	73.07	55.99	48.57	87.86	100.68	228.72	239.27	169.11	63.32	130.81	56.04	84.99	92.10	26.32	195.58	65.56
74	ER12b	ExonRegion	0	2.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	3.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
75	E13_Aa	NovelBoundary	0	9.41	9.87	7.18	19.01	11.46	5.11	0.00	4.27	3.24	4.70	8.00	0.00	0.00	4.94	10.75	14.87	3.74	2.40	0.00	6.01	2.90	0.00	3.67
76	ER13a	ExonRegion	0	51.43	141.88	80.28	74.34	116.28	71.66	70.34	70.04	83.20	62.67	91.10	159.62	195.84	192.42	121.73	87.35	140.04	59.94	82.31	96.42	15.79	135.14	47.97
77	E13_Da	KnownBoundary	0	26.45	148.00	78.62	76.21	141.94	49.01	92.12	57.87	70.28	62.27	63.17	131.44	209.73	122.90	76.40	47.42	69.00	33.74	50.73	58.93	0.00	92.59	11.61
78	ER13b	ExonRegion	0	47.31	156.36	76.32	83.03	183.37	75.93	103.24	75.25	102.81	62.88	73.67	198.50	245.07	164.75	112.46	67.58	91.83	26.22	80.60	105.07	4.81	166.24	40.30
79	E13_Db	KnownBoundary	0	47.93	138.99	84.24	90.56	177.42	50.43	76.62	82.81	101.94	45.77	82.92	135.64	120.61	120.43	114.72	39.48	58.91	23.09	84.43	99.84	0.00	121.85	34.66
80	ER13c	ExonRegion	0	62.38	180.16	94.21	71.73	150.25	70.22	77.22	72.85	102.23	62.93	54.22	182.13	152.49	152.20	97.00	83.92	72.90	32.90	75.04	89.87	3.96	123.92	38.57
81	E13_Dc	KnownBoundary	0	129.43	201.41	116.73	87.90	130.14	74.05	159.47	72.95	84.69	52.03	45.01	138.95	106.16	194.89	157.61	89.98	73.87	50.45	129.23	88.01	57.45	159.15	74.10
82	ER13d	ExonRegion	0	47.25	65.68	57.46	55.74	86.50	38.54	42.86	52.80	65.29	50.47	22.55	67.74	67.97	68.05	59.73	42.80	35.63	34.58	47.65	53.10	8.17	64.67	36.53
83	ER13e	ExonRegion	0	1.38	3.63	6.39	2.19	14.43	4.15	5.58	2.78	6.39	5.14	1.51	3.58	1.43	4.94	16.27	2.71	0.00	1.21	1.11	5.18	0.00	1.54	0.00