Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FYTTD1 Gene 0 109.26 229.07 95.13 123.51 216.78 163.87 160.49 118.94 124.59 121.08 332.58 278.98 243.36 252.94 156.39 171.85 158.64 84.68 75.15 142.76 81.77 163.08 99.47 2 428738 Transcript 0 7.15 2.28 0.00 0.00 5.31 6.23 2.24 0.73 0.01 0.48 1.11 0.00 2.19 1.41 1.74 4.21 0.02 0.00 1.81 1.21 1.83 0.00 0.00 3 494309 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.73 0.00 0.00 0.00 0.53 0.00 1.50 0.00 0.00 0.00 4 415708 Transcript 0 4.36 2.10 2.14 1.23 7.72 2.08 8.46 0.80 1.90 0.70 3.51 5.88 11.40 8.60 7.22 5.16 3.40 0.85 2.63 3.29 2.27 1.29 3.63 5 392374 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 241502 Transcript 0 2.12 0.68 0.00 0.00 3.57 0.00 1.32 1.15 0.00 0.00 0.00 1.44 0.00 1.62 1.93 0.00 0.00 1.85 2.12 0.00 0.00 0.00 0.00 7 412924 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 418169 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 1.85 1.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 3.12 0.00 9 426031 Transcript 0 0.01 0.31 0.53 0.00 0.42 1.30 0.56 1.09 0.00 0.99 3.93 1.52 0.00 1.69 1.21 1.68 1.87 1.43 0.00 0.00 2.50 0.30 1.66 10 424384 Transcript 0 0.62 3.89 3.00 0.48 3.66 7.59 2.50 1.40 6.71 2.81 7.72 1.47 1.79 7.38 3.52 7.69 8.47 12.52 2.60 3.51 5.15 3.25 6.94 11 428395 Transcript 0 5.50 24.81 11.27 20.17 27.83 47.31 24.89 14.17 31.87 24.77 122.93 53.69 80.67 53.60 17.41 41.02 64.70 26.98 14.65 37.02 23.80 29.17 17.62 12 463136 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 492360 Transcript 0 0.00 9.60 1.12 3.50 4.16 0.00 5.83 2.01 3.39 5.26 9.21 6.00 0.00 7.89 5.93 4.10 0.00 8.00 0.00 8.63 11.24 0.00 3.59 14 ER1a ExonRegion 0 14.30 4.56 0.00 0.00 10.61 12.47 4.49 1.46 0.01 0.97 2.21 0.00 4.38 2.82 3.48 8.42 0.04 0.00 3.61 2.41 0.51 0.00 0.00 15 E1a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 16 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.47 0.00 0.00 0.00 1.06 0.00 0.00 0.00 0.00 0.00 17 ER2b ExonRegion 0 0.28 0.13 0.04 0.20 0.00 0.40 0.22 0.00 0.14 0.09 0.12 0.09 0.19 1.09 2.21 0.49 0.00 1.22 0.00 1.58 0.02 1.12 0.12 18 E2a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E2a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.00 0.00 0.00 0.00 20 ER3a ExonRegion 0 0.84 1.36 0.00 0.00 1.06 5.89 1.22 0.29 0.73 0.00 2.38 0.00 0.00 3.05 3.73 1.98 2.92 0.00 2.81 2.16 0.00 0.82 0.39 21 E3_Ab KnownBoundary 0 0.00 6.12 0.00 0.00 3.90 8.01 8.83 2.14 2.58 0.00 7.26 0.00 0.00 14.72 4.45 3.85 32.73 0.00 12.89 8.25 5.13 3.12 4.01 22 ER3b ExonRegion 1 31.85 83.58 12.03 20.10 47.76 76.53 61.70 12.13 15.36 16.32 112.01 6.35 86.92 81.31 40.23 107.74 67.94 80.62 41.36 44.18 50.43 30.94 64.17 23 E3_Ac KnownBoundary 1 66.83 164.64 33.62 58.00 151.27 184.21 165.65 33.80 42.51 44.08 207.21 17.86 213.95 182.71 76.15 310.26 144.74 215.18 126.22 100.54 107.37 92.83 166.88 24 ER3c ExonRegion 1 29.62 65.09 21.53 30.21 41.69 90.36 58.41 27.25 38.97 39.70 209.12 19.96 37.24 139.45 46.01 136.65 119.95 104.91 39.00 81.32 94.14 56.01 80.35 25 E3a_E7a KnownJunction 1 17.11 34.73 39.65 71.32 51.95 17.55 20.27 50.52 68.40 86.41 432.79 115.39 66.72 290.25 82.08 97.15 269.94 110.27 86.97 136.91 150.18 61.29 64.53 26 ER4a ExonRegion 0 0.02 0.62 1.07 0.00 0.85 2.60 1.13 2.19 0.01 1.99 5.49 3.03 0.00 3.37 2.42 3.37 3.74 2.86 0.00 0.00 5.00 0.60 3.33 27 E4a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER5a ExonRegion 0 1.25 1.74 1.92 0.96 4.10 9.84 4.99 1.23 6.74 4.08 13.28 2.95 3.57 14.76 7.04 15.38 12.92 11.64 5.19 4.47 7.14 3.74 9.53 29 E5a_E7a KnownJunction 0 0.00 6.05 4.08 0.00 3.23 5.34 0.00 1.56 6.68 1.53 2.16 0.00 0.00 0.00 0.00 0.00 4.02 13.39 0.00 2.56 3.15 2.76 4.35 30 E6_Aa NovelBoundary 0 179.81 135.57 36.84 56.77 186.67 121.35 195.73 55.04 46.50 44.46 45.96 16.66 64.44 48.56 57.48 145.52 109.86 69.35 82.26 174.05 97.48 61.78 120.53 31 ER6a ExonRegion 0 13.08 6.31 5.15 3.69 23.17 6.23 23.16 2.39 5.69 2.11 8.20 17.63 34.19 18.45 21.65 15.47 10.20 2.56 7.88 9.88 6.80 3.86 10.89 32 E6_Da NovelBoundary 1 58.53 20.46 72.38 68.19 20.80 26.01 103.87 48.34 66.06 39.78 62.86 7.50 34.25 19.66 10.63 42.72 91.72 19.61 8.56 30.23 15.38 20.33 32.52 33 E6a_E7a KnownJunction 0 0.00 0.00 1.27 0.00 0.00 0.00 2.21 0.00 0.00 0.00 2.32 0.00 0.00 7.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER7a ExonRegion 0 50.09 98.34 55.08 87.16 150.65 155.11 104.21 70.13 125.63 101.96 484.66 223.30 244.88 352.18 107.52 317.59 266.57 204.36 114.09 195.99 139.87 158.85 174.26 35 E7a_E8a KnownJunction 0 6.37 17.56 5.74 11.22 15.53 0.00 14.26 2.55 5.12 5.45 16.69 6.30 0.00 14.72 17.06 15.72 0.00 8.95 12.99 8.76 6.05 0.00 0.00 36 E7a_E9b KnownJunction 1 27.12 123.00 48.85 90.76 130.39 230.72 116.06 63.91 150.72 120.31 600.57 269.94 400.14 266.88 73.43 201.14 296.77 108.36 55.72 176.67 111.69 143.78 84.08 37 ER8a ExonRegion 0 9.40 12.32 5.91 11.90 8.97 9.72 14.36 4.67 4.90 7.93 24.33 6.41 9.05 13.59 4.29 12.94 14.54 16.17 7.11 11.98 6.74 2.16 4.33 38 E8a_E9b KnownJunction 0 3.70 11.64 3.46 15.28 0.00 8.01 12.14 7.97 4.48 8.76 30.01 11.55 22.08 9.65 0.00 0.00 8.70 7.21 4.61 11.31 3.15 3.06 0.00 39 ER9a ExonRegion 0 5.50 24.81 11.27 20.17 27.83 47.31 24.89 14.17 31.87 24.77 122.93 53.69 80.67 53.60 17.41 41.02 64.70 26.98 14.65 37.02 23.80 29.17 17.62 40 ER9b ExonRegion 0 56.89 219.48 79.23 122.83 143.82 196.94 135.25 106.77 188.88 169.72 680.69 418.55 388.67 439.58 145.61 297.23 385.42 141.79 124.47 230.61 169.46 230.23 174.45 41 E9a_E10a KnownJunction 0 84.83 236.14 59.40 117.43 211.88 148.15 138.14 126.43 167.10 152.39 636.11 464.40 475.94 420.98 154.65 251.99 371.11 90.00 76.24 244.87 117.07 223.50 139.40 42 E9a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.85 1.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 3.12 0.00 43 ER10a ExonRegion 0 70.55 223.08 72.42 120.80 174.82 155.08 153.76 127.79 182.67 150.24 619.49 451.13 488.23 382.21 114.50 234.01 324.92 112.84 125.82 202.84 117.09 216.76 137.63 44 ER10b ExonRegion 0 109.98 325.79 95.22 148.77 199.10 204.28 178.26 143.50 200.37 184.15 701.90 550.94 647.11 481.82 188.23 403.96 352.36 207.57 162.88 265.11 182.93 273.19 229.20 45 E10b_E11a KnownJunction 0 98.31 328.43 69.07 142.54 263.07 227.54 166.94 133.29 168.20 139.09 625.37 556.38 419.13 445.82 142.53 330.34 348.48 156.94 131.02 222.62 160.87 222.52 182.85 46 E10b_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER11a ExonRegion 1 87.40 348.94 83.43 146.55 289.53 179.23 173.17 143.61 164.56 145.32 714.32 586.26 548.46 528.36 128.59 354.99 363.78 188.47 114.95 226.22 174.87 287.40 226.12 48 E11_Da KnownBoundary 1 110.69 356.84 65.64 98.89 295.67 142.99 172.54 94.26 96.15 111.13 615.42 505.06 498.51 490.38 115.58 292.66 296.49 129.13 102.50 230.93 139.43 294.90 230.31 49 E11_Ab KnownBoundary 1 114.24 323.69 96.12 134.58 232.94 143.50 183.76 138.91 154.71 113.57 501.34 550.83 464.58 511.27 163.79 306.93 317.16 138.45 129.04 168.23 148.20 259.63 190.02 50 ER11b ExonRegion 1 123.76 390.55 110.15 165.70 304.05 172.67 201.59 171.30 182.99 159.96 726.77 718.92 616.37 635.97 158.50 395.29 379.08 213.56 143.51 243.00 183.84 355.51 270.17 51 ER11c ExonRegion 0 121.51 367.62 101.37 160.51 287.16 203.51 209.52 163.22 203.65 160.67 650.33 766.02 629.42 607.79 188.78 374.62 361.60 234.37 191.05 259.38 248.87 312.43 222.32 52 E11b_E12a KnownJunction 0 118.91 344.68 87.55 154.09 215.70 198.92 239.36 147.13 211.66 158.40 562.67 763.30 469.77 608.87 221.40 305.82 300.98 227.50 164.99 274.91 287.94 224.60 200.60 53 ER12a ExonRegion 0 84.73 295.32 61.21 134.29 225.18 190.43 170.70 118.04 158.71 129.68 509.69 592.76 501.83 486.59 179.28 295.32 273.12 192.13 120.44 250.51 245.26 202.42 184.60 54 E12b_E13a KnownJunction 0 121.50 347.83 53.46 153.49 249.24 172.46 187.78 110.82 143.46 111.72 448.75 564.78 443.96 455.53 149.82 286.25 244.88 145.38 129.32 230.49 212.45 206.36 167.99 55 ER12b ExonRegion 0 95.24 312.66 71.07 149.24 243.49 191.17 193.30 116.24 154.39 129.89 480.81 547.68 471.35 455.57 151.59 319.50 258.30 189.86 115.47 238.30 215.96 203.14 182.07 56 ER13a ExonRegion 1 96.04 304.40 81.87 171.55 230.78 157.59 188.58 116.56 159.79 134.40 492.65 630.75 439.98 503.17 146.69 308.54 279.13 195.98 109.90 230.19 222.85 197.67 163.72 57 ER13b ExonRegion 1 75.19 329.89 119.53 192.56 258.01 183.54 228.89 138.19 208.99 161.23 689.62 707.61 441.50 623.63 177.47 394.64 356.44 301.12 168.39 268.05 292.68 278.03 256.73 58 E13b_E14a KnownJunction 0 69.49 410.32 129.45 184.63 334.55 251.50 252.26 149.18 229.60 169.36 738.61 964.81 602.56 675.50 259.84 440.91 401.03 352.35 216.67 299.52 358.25 320.80 305.17 59 ER14a ExonRegion 0 89.63 376.21 101.28 149.47 333.72 329.61 303.40 132.25 189.52 155.42 577.80 768.13 534.45 636.13 226.43 401.51 316.73 317.13 201.27 284.61 285.41 235.24 247.43 60 E14_Ab KnownBoundary 1 133.65 437.95 91.42 149.33 437.86 408.06 478.59 125.81 172.80 158.40 461.33 790.01 572.85 669.50 260.96 376.14 272.84 278.53 143.35 302.90 242.48 200.72 227.24 61 ER14b ExonRegion 0 96.15 360.52 81.12 140.67 362.98 262.01 293.95 127.93 163.86 137.97 549.98 563.35 465.09 583.50 226.85 383.40 279.99 253.96 124.76 260.71 260.22 198.63 231.96 62 E14a_E15a KnownJunction 0 136.25 347.18 91.10 129.05 259.59 165.76 198.78 152.59 174.04 138.96 549.14 602.30 348.52 737.30 336.73 424.33 244.04 217.42 134.87 239.50 262.18 243.77 235.52 63 E14a_E15b KnownJunction 0 0.00 9.60 1.12 3.50 4.16 0.00 5.83 2.01 3.39 5.26 9.21 6.00 0.00 7.89 5.93 4.10 0.00 8.00 0.00 8.63 11.24 0.00 3.59 64 ER15a ExonRegion 0 109.64 321.31 87.74 122.66 211.38 150.74 168.94 146.23 172.92 140.38 569.43 616.52 362.07 675.96 280.84 386.38 287.84 203.25 128.05 229.36 264.45 243.36 223.77 65 ER15b ExonRegion 0 98.60 245.38 69.50 81.73 239.94 208.47 209.21 110.30 126.89 131.46 466.91 401.01 289.65 430.18 149.46 264.50 211.73 110.75 89.41 163.34 134.76 224.33 132.03 66 E15_Da KnownBoundary 0 138.99 318.82 68.57 127.46 328.86 232.76 276.28 134.07 140.83 170.68 328.56 379.92 267.35 260.93 87.64 210.03 164.19 61.14 106.64 160.75 37.25 266.49 95.35 67 ER15c ExonRegion 0 115.55 258.15 92.76 149.77 364.99 282.99 278.90 165.86 182.12 179.69 568.41 438.39 425.33 399.93 153.04 254.09 281.76 94.42 111.99 214.64 99.63 302.22 125.04 68 E15_Db KnownBoundary 0 160.99 241.86 143.46 192.88 392.11 253.38 212.69 180.44 213.48 184.70 550.72 536.12 421.73 486.96 225.11 337.95 315.75 149.02 156.15 293.19 146.35 358.28 160.40 69 ER15d ExonRegion 0 124.39 249.44 102.43 170.00 373.02 284.97 280.05 152.76 214.94 169.16 660.79 424.32 398.61 491.68 198.56 334.94 396.97 146.96 164.34 278.25 179.25 258.60 198.00 70 E15_Dc KnownBoundary 0 188.92 317.18 119.27 127.26 449.58 308.63 318.94 140.02 200.87 194.32 700.86 384.13 387.96 483.73 210.15 272.32 485.18 95.18 152.76 331.47 213.63 249.71 153.31 71 ER15e ExonRegion 0 200.23 375.56 174.92 213.20 350.65 240.86 242.97 204.14 186.57 190.93 399.43 359.31 310.53 282.07 264.83 187.41 168.16 78.48 91.72 188.72 70.20 231.94 110.99 72 ER15f ExonRegion 0 12.70 8.90 3.83 15.67 13.04 9.86 3.64 3.89 1.70 3.87 3.38 9.20 0.00 5.08 10.88 1.86 0.00 3.00 5.18 2.66 0.00 1.30 0.00 73 ER15g ExonRegion 0 2.12 0.68 0.00 0.00 3.57 0.00 1.32 1.15 0.00 0.00 0.00 1.44 0.00 1.62 1.93 0.00 0.00 1.85 2.12 0.00 0.00 0.00 0.00 74 IG30_SR2 SilentIntergenicRegion 0 3.38 12.09 9.38 12.33 10.79 11.02 14.61 11.18 13.31 15.07 4.63 7.08 16.42 4.17 6.93 5.70 5.28 5.97 4.07 12.64 2.11 7.99 2.38 75 IG30_AR2 ActiveIntergenicRegion 0 11.04 7.91 2.53 3.87 31.31 14.37 14.30 1.54 2.12 6.52 0.47 15.09 9.76 1.71 3.53 2.41 0.00 1.20 0.00 7.25 0.00 6.08 3.69 76 IG30_SR3 SilentIntergenicRegion 0 2.23 15.31 0.00 6.24 16.93 7.64 5.06 1.73 2.83 2.48 3.13 13.78 2.22 0.89 1.95 6.75 2.28 7.36 8.69 5.61 0.00 3.98 1.44 77 IG30_SR4 SilentIntergenicRegion 0 1.50 20.69 1.25 9.96 17.76 5.25 8.61 1.73 7.26 2.51 1.97 2.46 0.08 1.93 3.60 2.61 3.93 6.69 2.80 4.11 0.00 0.00 3.29 78 IG30_AR5 ActiveIntergenicRegion 0 5.50 46.48 6.08 16.51 11.96 5.00 11.79 6.72 17.06 12.71 1.93 8.72 5.08 3.56 7.78 4.80 4.23 13.46 3.98 11.80 0.78 3.42 3.85