Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C3orf57 Gene 0 3.32 36.11 4.85 1.27 3.94 1.40 3.54 8.00 1.08 1.47 13.08 5.36 0.00 0.54 0.00 0.20 0.00 4.18 3.08 18.23 1.02 2.72 0.52 2 359175 Transcript 0 2.87 40.70 4.30 1.65 3.39 0.93 3.69 10.74 1.05 2.51 25.66 4.49 0.00 1.04 0.00 0.02 0.00 8.76 2.63 17.15 1.93 1.56 0.10 3 497374 Transcript 0 0.00 4.33 0.00 0.62 0.00 0.37 0.94 0.00 0.00 0.00 2.35 0.72 0.00 0.00 0.00 0.00 0.00 2.96 0.00 15.49 0.22 0.00 0.00 4 497137 Transcript 0 0.26 6.26 0.60 0.00 2.61 0.67 0.97 1.08 0.00 0.42 4.27 0.87 0.00 0.00 0.00 0.00 0.00 2.47 0.77 7.73 0.81 0.51 0.00 5 ER1a ExonRegion 0 0.16 3.73 0.18 0.00 0.10 0.14 0.20 0.58 0.00 0.13 1.15 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.60 2.29 0.17 0.08 0.00 6 E1_Ab KnownBoundary 0 0.00 24.07 1.83 1.90 0.00 0.00 4.20 6.78 1.68 0.00 10.69 0.00 0.00 0.00 0.00 0.00 0.00 10.16 0.00 15.47 6.30 0.00 0.00 7 E1_Ac KnownBoundary 0 0.00 33.42 1.71 0.00 0.00 0.00 0.00 7.15 0.00 0.00 23.43 0.00 0.00 2.47 0.00 0.00 0.00 17.58 0.00 16.94 0.00 0.00 0.00 8 ER1b ExonRegion 0 0.00 30.12 2.45 0.00 0.00 0.00 2.40 8.75 0.00 0.57 22.59 0.00 0.00 1.62 0.00 0.00 0.00 18.25 0.80 18.48 4.41 0.52 0.00 9 ER1c ExonRegion 0 0.00 32.44 1.37 0.00 0.00 0.00 3.09 9.19 0.22 2.29 32.60 0.00 0.00 0.62 0.00 0.00 0.00 20.77 11.73 27.72 3.07 5.84 2.27 10 E1a_E2a KnownJunction 0 0.00 44.53 0.00 0.00 0.00 0.00 4.06 10.76 1.24 1.07 27.06 0.00 0.00 0.00 0.00 0.00 0.00 19.57 18.17 42.76 3.15 2.69 0.00 11 ER2a ExonRegion 0 0.00 29.41 0.55 1.63 1.47 7.04 2.79 6.23 1.95 2.07 39.76 7.82 0.00 0.37 0.00 0.00 0.00 18.08 13.94 36.63 8.74 2.62 0.00 12 E2_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.49 0.00 9.08 0.00 0.00 0.00 13 E2a_E3a KnownJunction 0 0.00 2.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E2a_E4a KnownJunction 0 0.00 44.40 1.83 2.06 0.00 0.00 4.02 13.27 1.10 4.35 57.17 0.00 0.00 2.47 0.00 0.00 0.00 22.01 3.67 23.07 4.94 0.00 0.00 15 ER2b ExonRegion 0 0.00 4.33 0.00 0.62 0.00 0.37 0.94 0.00 0.00 0.00 2.35 0.72 0.00 0.00 0.00 0.00 0.00 2.96 0.00 15.49 0.22 0.00 0.00 16 E3_Aa NovelBoundary 0 0.00 22.69 7.04 1.80 0.00 0.00 8.83 5.67 0.00 0.00 2.68 0.00 0.00 2.47 0.00 0.00 0.00 11.03 0.00 23.97 4.82 0.00 0.00 17 ER3a ExonRegion 0 0.78 15.87 1.80 0.00 3.50 2.02 2.91 1.23 0.00 1.25 5.87 2.62 0.00 0.00 0.00 0.00 0.00 7.42 2.31 20.01 2.43 1.53 0.00 18 E3_Da NovelBoundary 0 0.00 2.70 4.58 0.00 4.33 0.00 0.00 10.60 0.00 1.26 2.68 0.00 0.00 0.00 0.00 0.00 0.00 12.15 7.44 20.39 0.00 2.27 0.00 19 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 4.33 0.00 0.00 2.01 0.00 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 0.00 0.00 0.00 20 I3 Intron 0 0.88 16.41 0.13 0.28 1.12 1.02 1.57 1.61 0.26 0.71 2.42 0.55 0.00 0.36 0.00 0.00 0.00 2.62 0.66 13.33 0.00 0.43 0.41 21 I3_SR1 SilentIntronRegion 0 0.89 16.46 0.13 0.28 1.12 1.02 1.57 1.62 0.26 0.72 2.43 0.55 0.00 0.36 0.00 0.00 0.00 2.63 0.67 13.37 0.00 0.44 0.41 22 E4_Aa NovelBoundary 0 0.00 21.64 2.78 3.00 0.00 0.00 4.28 1.60 1.48 0.00 2.58 0.00 0.00 0.00 0.00 0.00 0.00 3.69 4.71 15.02 0.00 0.00 0.00 23 ER4a ExonRegion 0 6.52 82.09 11.68 2.54 7.04 2.25 8.35 16.55 3.15 3.07 35.94 9.23 0.00 2.23 0.00 1.19 0.00 8.09 8.16 40.28 2.37 8.10 2.58 24 E4_Da KnownBoundary 0 10.30 100.64 12.60 3.80 11.97 0.00 3.97 23.45 9.55 2.61 31.17 13.80 0.00 2.24 0.00 4.36 0.00 0.00 0.00 43.85 0.00 7.72 0.00 25 ER4b ExonRegion 0 8.45 73.98 10.88 2.87 10.06 2.66 6.85 18.36 2.04 3.05 18.66 13.48 0.00 0.65 0.00 0.07 0.00 1.96 3.64 26.07 0.69 4.61 0.30