Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PPM1L Gene 0 7.00 40.63 18.41 19.87 24.59 115.19 30.90 27.84 36.46 22.59 0.50 47.66 2.29 2.04 1.01 3.24 5.41 42.95 22.88 49.48 4.89 9.30 4.61 2 497343 Transcript 0 0.35 1.05 0.79 0.62 1.11 3.56 2.20 1.29 1.23 2.25 0.11 2.23 0.00 0.27 0.00 0.50 0.69 7.31 3.41 4.40 1.26 0.22 0.41 3 498165 Transcript 0 9.69 54.25 26.11 29.10 35.46 161.56 41.26 39.13 46.86 29.80 0.63 55.55 3.04 1.96 1.46 3.34 5.44 36.58 25.58 53.75 3.99 11.45 4.48 4 464260 Transcript 0 1.62 0.26 0.00 0.00 0.00 0.48 0.31 0.00 0.00 0.00 0.00 2.80 0.98 0.34 0.26 0.00 0.00 0.00 0.00 0.95 0.28 0.27 0.00 5 295839 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 480117 Transcript 0 0.53 0.69 0.19 0.62 0.51 0.34 1.49 0.55 0.37 0.19 0.00 1.78 0.00 0.03 0.16 0.23 0.00 0.48 0.08 0.17 0.00 0.18 0.15 7 IG1_SR3 SilentIntergenicRegion 0 0.00 16.95 3.54 4.16 5.20 1.83 5.96 0.00 3.36 1.91 0.00 1.20 0.00 0.00 0.00 0.00 0.00 2.36 1.06 0.71 0.00 0.00 0.00 8 IG1_AR3 ActiveIntergenicRegion 0 4.30 16.33 18.15 10.77 8.52 16.24 7.58 5.41 5.70 4.18 0.13 10.68 1.46 0.61 0.86 1.84 1.25 8.99 9.10 9.78 0.00 0.65 0.20 9 ER1a ExonRegion 0 0.36 0.80 1.77 0.51 1.12 10.38 2.00 1.73 2.79 4.19 0.32 4.20 0.00 0.80 0.00 1.50 0.98 21.93 8.13 12.51 3.78 0.65 1.23 10 E1_Ab KnownBoundary 0 0.00 3.09 4.73 0.00 0.00 9.77 0.00 1.85 5.38 5.51 0.00 0.00 0.00 2.47 0.00 3.85 4.49 31.50 12.33 29.34 3.09 2.69 0.00 11 ER1b ExonRegion 0 0.46 8.43 7.93 3.79 2.11 25.28 7.57 7.06 17.11 9.92 0.20 17.47 2.20 1.75 0.00 3.34 4.21 70.07 12.84 55.54 9.12 3.16 6.40 12 E1a_E6a KnownJunction 0 2.82 40.12 1.71 4.83 7.81 36.00 28.13 8.79 20.05 10.77 0.00 19.06 6.82 2.24 0.00 0.00 0.00 59.36 4.80 61.55 7.97 5.63 4.01 13 I1_AR5 ActiveIntronRegion 0 4.23 8.13 1.05 2.73 0.00 3.67 22.32 1.73 4.06 5.73 0.00 0.00 0.00 0.00 0.00 0.00 3.30 5.54 3.19 2.13 0.00 0.00 2.94 14 I1_AR6 ActiveIntronRegion 0 21.44 34.58 18.38 16.26 18.82 12.74 20.45 8.78 4.46 3.26 0.00 11.47 0.43 0.00 0.00 0.33 0.00 7.96 5.23 5.67 0.00 0.47 0.00 15 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.44 0.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 E2a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER4a ExonRegion 0 2.60 1.25 0.00 0.00 1.64 0.00 5.69 1.58 0.00 1.05 0.00 2.09 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.03 0.00 1.28 0.00 22 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E5_Aa NovelBoundary 0 31.41 12.17 67.09 35.73 11.80 10.68 53.22 21.73 25.90 47.79 5.05 15.76 17.04 2.06 0.00 15.81 22.16 13.85 69.46 5.75 11.86 0.00 28.08 24 ER5a ExonRegion 0 6.48 1.04 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 4.89 3.94 1.36 1.04 0.00 0.00 0.00 0.00 0.53 1.12 1.08 0.00 25 E5_Da NovelBoundary 0 102.24 113.60 156.77 265.40 128.18 69.79 226.60 315.53 291.06 211.97 77.28 57.47 25.97 26.25 35.11 140.56 142.59 167.60 60.33 114.54 52.57 46.48 56.17 26 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 27 ER6a ExonRegion 0 1.09 16.57 4.25 7.16 12.94 39.78 24.47 16.22 24.55 9.27 0.00 55.27 3.24 1.62 0.00 8.88 4.26 84.27 22.57 80.64 8.66 8.31 8.31 28 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E6a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E6a_E9a KnownJunction 0 0.00 19.73 4.97 5.09 8.32 22.88 8.61 7.31 19.36 8.46 0.00 64.22 6.82 0.00 0.00 3.50 4.30 61.39 26.17 59.70 8.90 16.41 0.00 31 ER7a ExonRegion 0 0.70 2.36 0.60 1.35 2.22 0.30 4.60 2.13 0.91 2.55 0.00 2.49 0.00 0.00 0.00 0.00 1.09 0.00 2.11 0.70 0.00 0.00 0.00 32 ER8a ExonRegion 0 1.13 3.61 1.30 4.33 1.90 2.35 4.74 2.29 2.61 0.30 0.00 10.21 0.00 0.20 1.09 1.58 0.00 3.31 0.59 1.16 0.00 0.01 1.07 33 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER9a ExonRegion 0 1.75 30.87 1.88 3.37 7.25 30.72 13.86 6.98 22.64 7.31 0.61 71.33 3.10 1.46 0.00 4.44 5.56 63.86 26.96 71.16 11.11 8.98 7.18 35 E9a_E10a KnownJunction 0 3.78 34.93 1.30 3.43 14.94 19.65 18.33 4.89 22.08 16.20 0.00 43.81 0.00 2.47 0.00 0.00 13.84 79.67 47.81 90.44 17.79 12.00 3.33 36 ER10a ExonRegion 0 2.90 22.51 7.53 3.92 8.59 42.59 20.53 12.38 28.82 17.24 0.29 60.96 1.30 2.57 0.00 4.48 10.38 85.05 28.41 62.40 10.24 10.01 7.42 37 E10_Da KnownBoundary 0 11.19 32.03 10.20 1.66 0.00 34.18 27.78 9.90 21.24 9.11 0.00 6.30 0.00 2.47 0.00 4.36 4.77 53.35 3.67 55.74 0.00 5.39 0.00 38 E10_Db KnownBoundary 0 0.00 28.94 8.90 0.00 0.00 63.66 11.04 4.76 21.56 9.37 0.00 11.70 0.00 5.24 0.00 4.19 3.93 40.75 16.85 47.04 14.21 8.33 8.37 39 ER10b ExonRegion 0 6.35 39.99 13.89 1.36 0.22 64.34 24.49 10.37 32.42 15.48 0.00 29.58 0.78 4.87 0.00 8.17 6.33 74.22 17.52 71.81 9.73 9.20 4.16 40 ER10c ExonRegion 0 4.56 34.11 7.54 7.08 9.66 71.84 19.69 13.04 30.04 14.63 0.50 47.12 0.50 4.35 0.61 3.40 7.64 71.05 28.29 55.87 7.27 8.51 6.39 41 E10_Dc KnownBoundary 0 3.78 5.20 5.47 6.63 7.47 84.16 26.06 16.63 48.26 13.38 0.00 49.82 0.00 4.89 0.00 4.36 12.16 44.15 23.62 31.06 8.96 12.25 4.35 42 ER10d ExonRegion 0 9.69 54.25 26.11 29.10 35.46 161.56 41.26 39.13 46.86 29.80 0.63 55.55 3.04 1.96 1.46 3.34 5.44 36.58 25.58 53.75 3.99 11.45 4.48