Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCDC50 Gene 0 97.19 165.26 82.89 110.92 188.59 141.16 112.01 102.04 122.30 123.77 274.62 307.61 312.50 283.54 354.99 97.44 151.46 60.43 47.88 101.74 57.32 148.46 61.21 2 392455 Transcript 0 141.27 131.40 74.36 80.06 123.06 89.55 78.21 84.50 91.99 107.05 408.68 309.01 385.28 490.33 571.98 166.83 202.61 65.31 45.23 89.56 69.29 135.32 69.43 3 392456 Transcript 0 5.60 7.57 2.12 0.78 2.08 2.25 5.03 3.01 7.61 5.99 46.21 46.01 34.35 53.00 49.22 11.91 31.98 20.80 4.02 15.24 11.69 4.98 4.73 4 460064 Transcript 1 8.43 12.64 11.12 10.21 26.43 2.68 17.06 13.40 10.61 12.48 41.21 87.99 141.33 49.78 72.27 27.89 21.00 11.07 9.11 20.94 9.99 14.54 13.39 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 1 9.60 14.15 7.76 5.95 5.54 11.84 5.92 6.56 10.98 12.26 109.38 7.55 16.08 144.61 184.17 52.79 59.64 30.20 11.42 23.26 29.72 18.90 22.92 7 E1a_E2a KnownJunction 1 38.97 51.77 81.66 81.57 84.89 155.14 56.44 59.23 68.49 86.20 844.06 74.57 142.69 846.73 937.64 247.29 383.54 198.77 85.65 182.61 175.88 107.04 109.52 8 ER2a ExonRegion 1 49.45 67.79 99.64 68.40 56.45 83.98 59.16 50.07 69.73 87.58 900.67 109.06 213.28 871.25 1037.36 199.51 402.97 167.65 53.75 162.88 227.65 112.94 100.59 9 E2a_E3a KnownJunction 1 87.72 127.35 119.07 77.98 43.04 38.33 58.78 53.31 82.81 107.69 910.34 146.45 339.43 1214.97 1477.60 216.61 469.85 151.10 49.41 211.31 250.82 150.08 114.90 10 ER3a ExonRegion 1 91.34 146.11 131.54 84.46 74.94 41.89 60.99 87.76 96.70 116.33 1123.90 362.14 496.88 1215.33 1405.49 335.57 539.03 199.40 86.73 185.54 267.20 185.52 115.64 11 E3a_E4a KnownJunction 0 120.69 177.21 156.09 100.29 115.28 94.72 104.36 115.42 109.14 144.19 1255.63 537.78 743.30 1388.55 1274.12 396.56 754.37 199.10 105.23 172.26 288.81 213.40 126.00 12 ER4a ExonRegion 1 132.25 211.72 162.06 96.41 139.60 82.78 113.82 116.84 119.49 162.83 1494.35 478.59 882.40 1443.89 1510.31 428.75 790.99 202.51 112.58 194.89 354.73 253.89 154.80 13 E4_Ab KnownBoundary 1 239.08 276.66 193.04 123.03 206.79 77.23 136.99 124.82 144.41 198.99 1612.83 465.15 1007.08 1619.64 1805.43 471.24 796.73 204.03 139.49 262.64 413.11 287.19 221.60 14 ER4b ExonRegion 0 137.91 160.29 156.13 111.32 155.67 68.80 97.52 116.12 116.30 177.48 1350.03 597.23 906.26 1405.94 1911.41 456.81 703.50 220.21 140.38 229.98 305.65 285.26 171.27 15 E4a_E5a KnownJunction 0 197.29 195.62 159.99 118.03 178.10 94.77 115.71 127.12 119.33 177.99 1358.71 678.97 764.72 1537.18 2009.15 458.08 754.09 227.87 155.11 254.26 280.96 332.19 147.85 16 ER5a ExonRegion 0 247.13 195.79 160.54 109.01 165.24 88.27 121.86 139.58 141.43 186.58 1503.78 958.50 1115.79 1683.45 1733.94 509.74 807.26 205.90 139.27 213.38 283.27 323.72 178.76 17 E5_Da KnownBoundary 0 20.37 25.59 18.54 8.52 19.86 0.00 30.16 16.96 13.69 13.14 62.86 63.47 141.71 47.32 89.13 25.63 27.02 11.73 8.66 25.89 13.78 13.72 8.37 18 E5a_E6a KnownJunction 0 6.59 0.00 0.00 0.00 0.00 0.00 2.16 2.51 4.48 1.67 39.27 38.26 12.82 17.31 37.70 0.00 21.60 15.55 3.86 2.43 3.09 3.12 0.00 19 E5a_E7a KnownJunction 0 328.13 207.92 137.84 106.75 144.65 93.53 106.39 133.94 131.51 181.02 1078.59 671.47 933.54 1329.04 1554.98 443.39 518.84 144.67 92.80 166.25 173.78 257.55 153.57 20 ER5b ExonRegion 1 8.43 12.64 11.12 10.21 26.43 2.68 17.06 13.40 10.61 12.48 41.21 87.99 141.33 49.78 72.27 27.89 21.00 11.07 9.11 20.94 9.99 14.54 13.39 21 E5_Db NovelBoundary 0 39.86 21.77 119.36 158.55 12.99 8.01 17.44 175.80 120.20 135.04 12.74 14.85 14.28 2.12 11.99 20.51 9.16 79.42 8.47 9.20 0.00 0.00 8.45 22 I5 Intron 0 3.62 6.65 3.53 4.38 9.01 2.25 10.28 5.07 7.06 5.02 23.91 70.19 105.36 27.25 15.80 11.22 16.80 4.13 3.27 14.91 4.72 11.69 4.87 23 I5_AR1 ActiveIntronRegion 0 4.00 8.34 7.48 6.42 6.39 3.39 12.31 8.84 8.82 4.78 29.55 57.02 73.86 29.86 27.31 13.90 17.31 3.96 3.89 18.76 6.76 8.13 8.14 24 I5_SR2 SilentIntronRegion 0 3.16 6.05 5.50 4.65 11.60 2.62 13.40 7.75 10.26 7.92 20.34 74.95 87.10 21.88 20.58 8.85 18.92 3.45 3.04 13.17 3.83 9.18 2.01 25 I5_AR2 ActiveIntronRegion 0 2.58 3.77 1.70 4.03 6.11 2.25 7.91 3.64 6.71 3.54 21.77 62.90 105.09 25.95 13.26 9.58 14.69 3.24 3.37 13.13 4.47 9.56 3.95 26 I5_SR3 SilentIntronRegion 0 3.16 7.59 1.72 3.18 8.01 2.50 11.34 4.73 6.58 5.74 25.31 95.16 142.98 26.47 11.27 11.46 17.07 4.97 2.89 15.77 3.12 17.30 4.27 27 ER6a ExonRegion 0 7.33 7.31 6.36 2.35 6.25 6.74 8.68 4.25 8.42 9.13 70.18 81.61 62.96 85.61 42.34 24.53 49.09 31.02 8.20 27.43 31.98 11.81 14.19 28 E6_Da NovelBoundary 0 0.00 3.03 1.36 5.06 0.00 2.56 2.21 9.00 5.73 1.67 20.06 25.66 34.25 27.37 0.00 12.73 13.37 12.52 4.80 17.07 32.49 14.08 11.61 29 E6a_E7a KnownJunction 0 2.89 15.39 0.00 0.00 0.00 0.00 4.24 2.26 9.92 7.17 29.17 18.16 27.27 56.10 67.62 11.19 25.25 15.84 0.00 15.85 0.00 0.00 0.00 30 I6 Intron 0 8.97 5.15 2.34 5.28 7.13 7.09 8.17 4.22 6.77 4.62 37.36 60.12 81.44 31.04 16.03 15.72 21.15 4.72 3.23 14.91 10.91 19.68 7.94 31 I6_SR1 SilentIntronRegion 0 3.54 3.95 1.97 3.55 6.61 4.88 7.24 3.31 6.12 3.83 35.51 65.49 96.86 32.02 10.77 16.80 21.93 3.83 2.69 15.70 11.81 17.61 8.86 32 I6_AR1 ActiveIntronRegion 0 3.37 3.19 5.20 10.65 8.46 11.10 4.69 3.46 8.01 4.62 51.04 35.69 65.91 24.63 6.98 19.92 29.53 3.00 2.67 18.80 11.32 24.83 11.11 33 I6_AR2 ActiveIntronRegion 0 7.84 3.42 3.68 8.29 5.62 8.46 9.06 6.51 6.46 7.13 38.38 51.64 63.68 30.28 12.30 12.50 25.19 5.38 4.96 17.11 7.07 25.92 6.82 34 I6_SR2 SilentIntronRegion 0 19.27 8.19 2.24 6.67 8.79 10.20 9.51 4.74 8.06 4.79 39.85 56.00 64.09 30.07 27.49 15.35 17.63 6.04 3.35 12.39 11.28 20.16 6.81 35 ER7a ExonRegion 0 308.28 362.35 138.54 95.04 182.14 105.06 141.99 123.81 138.76 172.43 1311.82 1020.04 1122.29 1437.88 1649.64 473.03 700.93 155.18 150.43 221.79 272.03 266.83 187.82 36 E7a_E8a KnownJunction 0 208.56 365.40 132.61 87.10 157.13 116.07 167.11 130.66 102.92 147.61 1322.02 1027.98 983.38 1612.35 1883.31 472.61 796.73 152.01 130.36 237.90 281.46 300.53 186.95 37 ER8a ExonRegion 0 157.33 251.80 140.40 95.58 175.11 106.65 170.29 130.82 131.06 174.05 1095.22 1000.30 1194.08 1543.20 1709.29 636.43 741.09 220.33 144.47 216.31 274.88 297.76 241.91 38 E8a_E9a KnownJunction 0 209.07 248.25 150.35 91.60 275.47 135.38 184.25 131.77 144.24 168.08 1037.84 1090.86 1374.26 1775.86 2358.37 940.52 708.84 227.21 224.10 256.50 290.97 418.47 332.32 39 ER9a ExonRegion 0 237.61 245.97 184.82 145.48 278.02 138.46 161.80 136.43 158.62 202.12 1606.07 1216.79 1631.15 1834.50 2410.42 681.35 962.23 246.03 228.68 239.11 344.32 398.67 281.78 40 E9a_E10a KnownJunction 0 248.56 342.97 214.84 152.69 326.83 180.52 182.83 103.18 124.28 221.93 1585.03 1119.21 1103.34 1365.48 2087.77 380.50 1066.85 182.64 149.84 218.85 319.02 306.05 154.93 41 ER10a ExonRegion 0 363.62 373.29 189.50 117.86 195.90 113.67 172.50 140.37 142.83 198.16 1363.49 1046.38 1118.98 1313.43 1660.79 428.25 770.47 116.89 141.35 187.92 335.71 295.23 156.63 42 E10a_E11a KnownJunction 0 549.88 450.31 183.67 133.45 192.36 149.74 242.59 161.26 149.82 181.88 815.26 1003.53 823.48 1255.47 1709.63 418.35 675.74 64.42 117.84 183.25 237.72 335.87 141.62 43 ER11a ExonRegion 0 386.53 353.46 199.46 156.58 306.71 147.96 209.94 142.93 155.64 194.04 1293.87 1150.67 1523.65 1421.41 2348.58 466.01 662.12 148.60 157.96 223.64 256.35 387.28 171.62 44 E11a_E12a KnownJunction 0 253.08 266.27 223.62 132.48 433.70 158.03 159.21 135.30 157.96 210.25 1216.62 1293.57 1361.60 1356.47 2014.47 392.38 500.89 102.35 107.30 199.93 171.06 396.36 105.68 45 ER12a ExonRegion 0 152.37 196.93 145.87 119.79 255.08 150.81 171.19 115.78 143.23 159.87 758.35 890.20 1048.46 722.63 1273.42 177.53 327.05 60.05 67.70 133.91 50.72 311.01 74.06 46 E12_Da KnownBoundary 1 136.25 116.36 95.68 130.25 286.08 208.86 232.12 97.22 145.43 125.90 255.96 639.21 740.37 353.35 247.48 67.25 171.39 51.40 69.55 129.82 43.24 256.94 112.59 47 ER12b ExonRegion 0 95.69 186.28 85.24 133.44 224.52 175.11 127.95 119.55 144.46 140.12 147.46 255.56 222.30 141.95 160.32 57.09 88.99 51.27 42.88 102.43 34.10 148.41 54.72