Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF639 Gene 0 70.73 141.29 71.77 85.67 96.11 67.90 82.97 61.60 47.63 104.48 126.05 180.65 159.07 104.32 92.06 70.96 80.39 52.05 42.33 85.99 28.59 91.48 42.68 2 496856 Transcript 0 0.36 20.08 2.90 3.78 6.95 9.44 1.76 1.39 2.58 8.76 13.53 8.70 16.72 10.00 4.45 12.49 11.75 22.56 2.65 4.15 8.86 1.56 10.23 3 491818 Transcript 0 9.78 25.39 11.00 1.96 7.81 14.93 9.01 9.16 4.48 28.88 56.49 6.00 6.66 43.62 39.31 42.98 61.34 90.58 25.04 45.19 43.06 31.41 33.63 4 481587 Transcript 0 0.00 3.00 1.01 0.00 0.00 0.00 2.04 0.00 0.74 1.20 3.54 2.59 1.39 6.19 4.30 1.39 2.31 3.85 0.02 0.00 0.00 0.08 0.02 5 326361 Transcript 0 6.28 19.96 12.84 15.27 11.01 6.83 10.54 8.42 7.08 13.15 12.14 22.21 15.49 11.63 13.43 7.53 8.12 6.82 5.36 12.67 5.02 10.92 4.70 6 466264 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 484866 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 494234 Transcript 0 1.66 8.27 1.43 5.07 5.44 2.30 7.04 3.22 1.73 2.14 6.33 13.77 13.06 3.55 4.16 2.79 6.20 2.02 0.00 1.00 0.69 4.24 1.38 9 483460 Transcript 0 17.99 39.36 3.46 4.59 13.07 2.58 7.34 9.52 5.99 11.30 16.57 33.72 42.89 9.55 6.66 7.81 7.66 2.38 2.30 3.64 1.26 9.49 3.31 10 466663 Transcript 0 8.68 11.48 7.56 4.70 15.34 6.48 11.29 2.92 4.67 9.65 9.03 15.55 20.26 11.37 15.48 14.46 10.20 9.01 11.66 8.26 9.63 6.32 10.51 11 ER1a ExonRegion 0 0.71 1.94 0.00 0.00 1.68 2.30 1.54 0.92 0.00 1.75 6.47 0.00 0.65 3.10 0.00 5.67 8.18 8.01 0.78 0.00 3.77 0.00 1.16 12 E1_Ab KnownBoundary 0 3.78 9.21 0.00 0.00 7.39 5.11 6.36 2.55 0.00 8.25 24.95 0.00 6.82 4.30 0.00 18.80 36.47 64.13 7.81 2.81 13.41 0.00 14.00 13 ER1b ExonRegion 0 1.47 8.79 1.65 0.00 4.77 6.50 1.38 1.25 3.68 12.87 28.04 3.21 6.48 24.19 8.86 22.06 20.47 32.86 14.02 13.60 13.82 7.60 15.06 14 E1_Ac KnownBoundary 0 6.96 22.76 8.34 0.00 0.00 7.61 3.62 9.32 6.66 22.54 20.37 0.00 13.31 49.86 22.50 7.69 36.37 18.86 0.00 28.76 17.73 13.96 8.28 15 ER1c ExonRegion 1 5.97 36.51 9.69 3.91 9.28 17.36 6.41 5.65 8.40 26.99 49.35 4.71 20.53 58.72 29.53 25.10 41.15 62.04 13.24 30.97 35.70 15.00 17.82 16 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 0.00 4.63 0.00 0.00 4.94 4.33 0.00 0.00 3.69 0.00 0.00 0.00 0.00 0.00 17 E1a_E4a KnownJunction 0 9.78 25.39 11.00 1.96 7.81 14.93 9.01 9.16 4.48 28.88 56.49 6.00 6.66 43.62 39.31 42.98 61.34 90.58 25.04 45.19 43.06 31.41 33.63 18 E1a_E5a KnownJunction 0 0.00 38.22 5.80 7.56 12.22 16.58 1.99 1.85 5.15 15.77 20.58 17.41 32.79 16.89 8.90 19.31 15.33 37.10 4.52 8.31 13.96 3.12 19.29 19 I1 Intron 0 0.00 1.76 1.98 0.66 0.87 1.59 0.86 1.12 0.40 1.29 4.60 0.00 1.25 5.04 2.98 5.79 5.36 4.87 1.72 3.46 7.40 2.26 2.86 20 I1_AR1 ActiveIntronRegion 0 0.00 3.05 2.06 1.27 0.00 1.49 1.15 0.08 0.00 1.00 4.26 0.00 0.87 6.17 3.58 6.00 4.86 6.77 0.77 2.96 8.62 4.00 2.26 21 E2_Aa NovelBoundary 0 0.00 5.53 0.00 1.33 0.00 2.50 0.00 4.93 4.86 3.65 5.11 0.00 8.28 14.07 4.45 12.22 0.00 2.40 0.00 6.14 16.37 8.57 3.59 22 ER2a ExonRegion 0 1.32 0.02 2.27 1.23 0.00 1.14 0.84 1.60 1.87 0.00 5.63 2.22 0.06 4.77 6.58 5.55 6.16 2.19 0.00 3.97 6.75 2.67 1.83 23 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 5.13 0.00 0.00 24 ER3a ExonRegion 0 0.00 3.00 1.23 0.00 0.00 0.00 1.87 0.00 0.65 0.94 3.29 7.77 4.16 8.16 8.57 0.68 2.18 5.54 0.07 0.00 0.00 0.24 0.07 25 E3a_E5a KnownJunction 0 0.00 5.99 1.80 0.00 0.00 0.00 2.25 0.00 1.56 2.66 2.68 0.00 0.00 5.47 0.00 3.50 4.77 2.32 0.00 0.00 0.00 0.00 0.00 26 ER4a ExonRegion 0 5.33 41.94 14.42 14.78 11.35 18.81 20.71 16.03 15.37 29.85 62.59 23.62 26.13 57.73 31.86 58.67 44.15 85.08 31.26 48.39 48.88 43.57 20.19 27 E4_Ab KnownBoundary 0 204.93 160.37 178.53 224.88 226.40 158.60 234.55 183.48 189.52 163.21 100.03 72.92 62.17 77.05 99.88 287.79 184.10 254.07 136.19 214.06 96.19 72.01 220.07 28 ER4b ExonRegion 0 29.39 76.57 26.73 32.76 31.03 33.85 33.79 25.96 28.58 61.97 91.09 68.71 67.38 95.12 73.22 66.35 69.89 85.57 40.15 69.90 68.98 59.19 43.06 29 E4_Da NovelBoundary 0 0.00 3.35 9.85 6.23 0.00 0.00 0.00 0.00 1.71 0.00 2.32 25.06 55.03 12.01 14.71 29.22 18.14 8.33 13.84 0.00 2.35 2.63 16.30 30 E4a_E5a KnownJunction 1 59.94 112.55 36.63 35.49 45.93 47.70 28.31 24.36 23.47 86.66 103.08 37.66 66.55 99.83 34.12 57.68 38.62 99.07 8.00 73.63 58.50 64.48 54.80 31 ER5a ExonRegion 0 70.20 234.18 51.17 80.79 108.01 81.82 85.72 53.92 49.89 116.76 145.21 172.87 139.58 169.00 89.82 96.45 85.40 92.00 36.92 112.14 54.69 112.30 82.23 32 E5_Da NovelBoundary 0 8.96 11.91 5.14 15.28 11.12 4.83 6.54 13.55 14.00 1.42 29.27 12.60 33.11 19.13 19.78 3.25 21.32 3.98 4.80 0.00 0.00 14.08 0.00 33 E5a_E7b KnownJunction 0 97.80 258.31 65.40 103.45 118.68 101.31 125.16 75.74 66.52 130.33 136.14 220.42 172.07 192.89 113.98 78.87 94.90 60.07 49.32 158.51 33.92 163.68 76.83 34 E6_Aa NovelBoundary 0 13.26 28.09 4.17 10.22 16.64 0.00 13.96 12.03 14.18 10.56 16.90 40.21 20.94 10.42 13.35 0.00 17.39 0.00 0.00 2.81 0.00 12.55 8.02 35 ER6a ExonRegion 0 3.31 16.54 2.86 10.13 10.88 4.59 14.08 6.45 3.46 4.28 12.66 27.54 26.13 7.10 8.31 5.58 12.39 4.04 0.00 2.00 1.38 8.47 2.76 36 E6_Da NovelBoundary 0 13.26 21.64 6.48 3.36 57.72 2.16 9.80 4.03 5.35 13.46 17.06 43.51 27.27 10.01 10.63 7.78 4.02 0.00 0.00 5.31 2.72 9.12 11.27 37 E6a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 I6_AR2 ActiveIntronRegion 0 12.50 21.86 3.06 8.52 12.45 3.14 9.47 9.17 4.99 8.84 15.87 36.63 37.07 15.62 4.24 10.97 11.68 5.37 0.00 6.26 2.67 8.77 2.09 39 E7_Aa NovelBoundary 0 20.89 33.28 3.34 8.06 42.19 10.22 6.62 21.19 6.48 8.22 14.90 55.82 55.52 12.42 8.90 7.52 13.09 0.00 0.00 11.89 2.84 0.00 6.83 40 ER7a ExonRegion 0 17.99 39.36 3.46 4.59 13.07 2.58 7.34 9.52 5.99 11.30 16.57 33.72 42.89 9.55 6.66 7.81 7.66 2.38 2.30 3.64 1.26 9.49 3.31 41 E7_Ab KnownBoundary 0 40.53 22.82 6.15 2.83 17.91 5.00 25.70 15.32 1.13 12.38 12.63 44.86 27.27 7.36 8.90 0.00 0.00 0.00 0.00 9.01 3.15 5.39 8.71 42 ER7b ExonRegion 0 115.47 242.53 69.09 115.97 114.86 102.29 111.95 82.94 75.23 169.64 190.48 287.97 316.58 204.14 118.31 116.92 128.44 76.84 53.59 134.89 44.53 182.52 88.36 43 E7a_E8a KnownJunction 0 121.73 300.41 85.48 141.94 106.88 99.20 120.56 65.47 77.02 183.52 233.16 424.19 469.29 222.09 119.41 184.91 170.08 86.51 34.45 151.10 37.81 168.02 77.08 44 E8_Ab NovelBoundary 0 79.87 182.93 65.88 127.62 85.57 56.27 80.16 71.02 74.30 168.80 105.34 226.12 224.01 119.02 85.67 110.65 86.58 77.52 41.41 94.85 21.37 151.19 55.83 45 ER8a ExonRegion 0 93.75 253.96 78.86 144.95 113.96 77.99 95.56 73.92 78.97 196.66 194.88 377.43 382.38 194.99 113.66 155.25 147.38 96.95 39.16 126.78 38.50 183.10 73.59 46 ER8b ExonRegion 0 133.99 366.46 93.15 151.11 157.95 104.18 122.42 97.62 89.40 201.11 257.51 338.57 305.25 179.93 141.61 117.56 152.75 66.64 54.63 175.21 44.50 211.23 64.70 47 E8a_E9a KnownJunction 0 3.78 14.87 6.33 3.26 11.97 5.34 4.46 4.48 3.91 10.48 10.21 0.00 19.80 9.65 5.19 11.79 9.07 8.91 0.00 0.00 8.90 6.18 3.41 48 E8a_E10a KnownJunction 0 242.27 758.48 92.60 137.21 254.67 172.00 267.80 95.66 93.29 189.59 255.28 476.71 379.85 199.95 150.32 146.46 205.98 57.50 145.42 192.65 57.58 212.30 113.87 49 E9_Aa NovelBoundary 0 924.90 564.37 448.74 405.74 646.27 402.78 647.87 480.57 467.59 335.91 190.26 136.99 221.41 110.07 140.80 579.93 401.78 495.91 344.67 464.23 173.72 209.36 448.75 50 ER9a ExonRegion 0 18.77 19.59 6.80 5.65 17.74 14.11 18.19 2.56 7.11 9.45 12.18 22.64 27.33 14.80 26.28 27.82 17.88 11.81 16.92 18.57 16.96 9.91 23.76 51 E9_Da NovelBoundary 0 77.05 48.41 4.41 18.58 22.92 27.43 63.20 23.29 5.67 11.12 4.42 6.15 7.30 21.31 15.82 31.36 26.65 16.29 17.88 57.14 15.63 9.86 26.72 52 E9a_E10a KnownJunction 0 3.48 0.00 9.55 5.19 16.30 0.00 11.22 1.73 3.01 9.03 4.69 24.01 13.64 9.65 14.96 3.76 3.65 6.30 18.07 6.20 3.03 2.88 4.35 53 ER10a ExonRegion 0 138.56 424.36 135.28 194.24 240.30 173.98 221.36 114.83 98.64 214.22 307.60 536.02 548.32 247.52 161.89 208.47 218.81 145.22 90.18 200.82 68.12 202.13 106.87 54 E10a_E11a KnownJunction 0 131.50 273.77 185.45 260.14 213.58 107.78 146.93 159.98 113.16 259.92 302.18 701.78 634.54 279.36 193.34 225.67 241.51 131.28 144.47 225.95 71.35 211.32 105.00 55 E11_Aa NovelBoundary 0 36.08 57.36 8.07 1.93 40.75 15.50 31.00 1.81 1.24 0.00 69.97 88.68 100.64 55.45 14.09 62.21 49.09 6.59 22.02 84.75 16.87 81.81 13.32 56 ER11a ExonRegion 0 141.09 344.81 151.82 206.54 190.88 125.55 149.32 150.86 110.86 243.61 401.17 630.64 522.99 320.44 194.35 227.23 283.38 160.95 144.79 260.96 93.20 237.79 113.61 57 E11_Da KnownBoundary 0 97.94 348.42 94.50 115.90 121.90 85.80 153.07 114.60 79.66 131.87 277.23 396.88 373.03 204.43 97.90 146.54 198.60 100.03 60.80 138.64 75.43 138.63 64.28 58 E11_Db KnownBoundary 0 147.58 365.53 98.37 110.81 201.87 102.33 169.14 80.46 59.06 111.26 196.84 274.74 254.04 192.36 106.68 152.78 121.65 97.66 112.47 131.99 65.79 86.03 74.27 59 ER11b ExonRegion 0 120.06 377.23 127.27 152.02 172.22 108.53 170.01 131.44 95.72 165.47 303.20 385.13 347.49 208.18 107.08 183.19 200.45 148.07 106.56 148.45 80.34 129.65 84.50 60 ER11c ExonRegion 0 136.20 303.64 141.11 170.76 216.46 162.19 193.82 127.30 95.36 216.60 282.20 390.57 416.23 240.95 161.15 185.74 195.17 112.69 109.58 181.51 82.68 160.04 101.72 61 E11_Dc KnownBoundary 0 222.56 315.80 170.40 188.29 308.15 171.32 209.82 174.20 100.26 255.99 340.56 405.43 320.60 287.89 197.79 212.17 209.82 108.86 145.23 226.08 72.59 244.81 105.76 62 ER11d ExonRegion 0 182.13 211.16 163.89 164.89 177.88 126.74 182.38 123.27 95.77 192.81 304.13 292.29 263.40 218.78 175.71 158.39 185.89 118.67 92.18 193.23 56.75 154.55 101.18 63 E11_Dd KnownBoundary 0 179.22 259.89 163.71 164.28 201.87 132.54 291.69 134.85 93.20 203.88 234.38 295.15 330.34 257.34 208.79 150.47 155.59 101.60 71.44 150.84 39.72 129.94 130.35 64 ER11e ExonRegion 0 216.25 313.21 169.53 170.40 249.09 185.12 212.52 124.15 107.59 211.90 316.33 325.37 361.27 242.21 193.09 166.98 207.39 122.77 95.72 209.28 75.08 182.44 113.67 65 E11_De KnownBoundary 0 224.04 277.45 170.01 178.57 166.81 155.14 183.36 98.78 103.09 184.84 240.17 269.79 305.82 192.83 215.47 130.91 141.47 104.59 93.37 224.54 75.49 159.76 91.85 66 ER11f ExonRegion 0 135.06 198.68 139.36 153.79 178.75 122.43 142.50 121.22 85.90 191.68 191.68 301.84 221.59 148.81 186.25 84.50 104.93 48.88 58.00 123.68 21.90 167.97 53.39 67 E11_Df KnownBoundary 0 15.93 50.12 24.75 39.02 24.79 6.98 17.58 12.12 11.86 30.86 12.16 13.35 14.77 16.30 5.32 0.00 7.39 0.00 0.00 8.44 5.56 17.33 7.51 68 E11_Dg KnownBoundary 0 28.00 66.11 32.58 40.79 59.51 0.00 27.20 26.00 12.07 32.53 30.96 62.87 13.64 21.31 14.34 3.25 8.32 5.93 15.81 28.57 0.00 42.80 11.35 69 ER11g ExonRegion 1 43.39 140.32 59.43 80.41 109.71 16.50 55.61 40.62 30.88 76.27 44.46 142.87 93.80 57.66 59.48 17.83 33.01 7.39 19.11 55.32 6.61 67.71 26.43 70 ER11h ExonRegion 0 17.51 59.84 36.24 44.59 33.02 19.36 30.77 23.66 17.63 39.45 28.32 64.41 46.40 30.10 33.72 17.06 18.21 16.28 16.09 34.05 3.20 30.10 12.28 71 IG26 Intergenic 0 4.53 19.83 7.35 9.04 11.98 4.58 9.60 4.24 3.23 7.17 1.75 6.07 4.88 2.52 5.05 2.14 1.95 2.42 2.37 6.07 0.92 3.70 2.43 72 IG26_SR1 SilentIntergenicRegion 0 8.06 24.86 4.03 13.45 24.69 15.97 19.69 7.30 2.51 8.51 7.67 6.84 4.84 7.91 15.35 0.00 4.47 1.43 8.22 14.82 0.00 7.73 3.79 73 IG26_AR1 ActiveIntergenicRegion 0 4.78 15.33 14.95 18.86 24.22 11.90 19.91 10.80 6.52 17.46 3.97 20.25 20.63 7.27 14.18 2.45 5.54 4.79 6.91 16.42 1.70 6.26 4.98 74 IG26_SR2 SilentIntergenicRegion 0 3.77 17.52 11.90 10.37 14.30 7.29 10.79 2.86 4.47 9.40 3.06 4.32 4.81 8.39 10.53 7.01 4.08 6.76 7.56 6.38 6.27 4.10 7.52 75 IG26_AR2 ActiveIntergenicRegion 0 14.48 54.36 21.13 24.14 27.67 12.36 19.18 14.81 8.39 20.89 8.40 14.56 9.91 5.56 16.44 3.83 2.71 2.91 3.99 15.32 0.52 14.08 4.94 76 IG26_SR3 SilentIntergenicRegion 0 5.75 17.74 0.81 2.54 13.65 6.01 8.55 0.88 1.42 2.81 2.01 5.56 1.62 1.81 3.25 1.02 2.27 3.50 0.71 4.33 0.00 2.51 4.88 77 IG26_SR4 SilentIntergenicRegion 0 5.74 16.36 4.34 6.73 4.10 1.76 4.31 2.28 2.12 1.98 2.14 5.80 1.65 2.28 3.33 1.90 0.00 5.17 0.00 6.95 0.16 3.52 0.00 78 IG26_AR5 ActiveIntergenicRegion 0 4.76 28.01 8.21 9.65 12.54 4.55 12.39 4.13 3.54 7.66 0.49 6.28 5.14 1.12 2.66 2.08 2.06 1.49 1.41 5.69 0.24 3.68 1.00