Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TNFSF10 Gene 0 231.83 1.58 15.26 27.53 138.71 22.30 26.62 87.37 39.17 15.18 90.52 96.37 141.12 106.77 107.38 135.82 83.76 0.18 0.05 0.31 2.10 54.92 12.63 2 241261 Transcript 0 43.38 0.34 2.18 4.56 28.96 1.59 4.31 12.71 6.23 2.08 2.07 9.92 13.14 11.40 13.41 13.68 2.81 0.00 0.00 0.00 0.00 13.11 2.43 3 382750 Transcript 0 0.00 0.00 22.26 32.16 0.00 0.00 0.00 150.29 43.14 28.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 419945 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 420541 Transcript 0 0.00 0.00 0.00 4.10 3.57 0.00 1.72 0.00 1.45 2.63 7.84 0.00 13.64 15.66 8.90 14.70 12.25 0.00 0.00 0.00 0.00 2.45 0.00 6 466777 Transcript 0 14.15 0.12 0.54 1.40 6.83 1.30 3.81 5.66 0.74 0.64 4.88 6.86 11.61 2.55 3.03 10.60 5.67 0.00 0.00 0.00 0.00 1.59 0.92 7 494851 Transcript 0 23.76 0.00 0.00 2.40 2.11 0.83 3.73 2.29 2.91 1.13 3.02 1.52 5.35 7.82 6.50 6.03 7.35 0.00 0.00 0.00 0.00 0.29 0.00 8 472804 Transcript 0 71.67 0.60 1.08 4.91 15.71 3.24 8.08 13.17 4.99 3.39 23.05 21.67 40.11 15.06 18.18 31.71 16.25 0.00 0.00 0.00 0.00 5.58 0.09 9 430881 Transcript 0 8.64 0.00 0.00 0.00 17.57 1.82 2.11 2.64 0.38 0.35 6.57 0.37 7.00 10.61 7.82 11.31 6.87 0.00 0.00 0.22 0.00 0.00 0.01 10 ER1a ExonRegion 0 2.34 0.00 0.00 0.00 1.75 0.76 0.00 0.00 0.00 0.00 0.20 0.00 0.00 0.90 0.00 5.53 0.00 0.00 0.00 0.00 0.00 1.01 0.00 11 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1_Af KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.38 0.00 1.77 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.25 0.00 14 ER1b ExonRegion 0 4.23 0.00 0.00 0.00 2.68 2.45 0.00 0.00 0.00 0.00 1.93 0.00 0.00 1.62 0.00 5.94 0.00 0.00 0.00 0.00 0.00 4.17 0.00 15 ER1c ExonRegion 0 4.23 0.00 0.00 0.00 2.68 3.67 0.00 0.00 0.00 0.00 1.93 0.00 0.00 1.62 0.00 5.94 0.00 0.00 0.00 0.00 0.00 4.17 0.00 16 ER1d ExonRegion 0 4.23 0.00 0.00 0.00 2.68 5.04 0.00 0.00 0.00 0.00 2.17 0.00 0.00 2.03 0.36 7.43 0.00 0.00 0.00 0.00 0.00 4.17 0.00 17 ER1e ExonRegion 0 7.41 0.00 0.00 0.00 8.03 14.67 0.00 1.73 0.00 0.00 9.66 0.00 0.00 14.62 4.35 11.89 4.95 0.00 0.00 0.00 0.00 4.17 0.00 18 ER1f ExonRegion 1 276.62 2.68 8.19 19.48 213.87 51.96 46.46 45.97 39.42 12.09 162.97 6.06 12.35 132.95 123.44 231.04 158.42 0.00 0.00 0.00 4.15 77.41 28.67 19 E1_Ag KnownBoundary 1 23.86 0.00 8.63 5.03 18.25 16.07 5.56 30.19 37.62 19.37 232.11 19.06 58.11 67.04 62.06 21.62 183.08 0.00 0.00 0.00 2.78 16.10 7.51 20 ER1g ExonRegion 1 35.50 0.50 6.99 16.47 17.04 4.57 3.30 63.44 50.81 17.53 295.73 30.31 47.81 175.18 121.55 118.62 323.84 0.00 0.00 0.00 4.95 73.36 14.12 21 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.00 0.00 0.00 0.00 13.35 0.00 4.30 0.00 0.00 0.00 0.00 3.12 0.00 22 E1a_E3a KnownJunction 1 69.12 2.96 9.88 38.72 33.45 0.00 2.25 104.82 60.53 17.76 198.79 45.46 53.57 460.18 347.12 347.60 227.12 0.00 0.00 0.00 3.15 251.85 47.04 23 E1a_E5a NovelJunction 0 0.00 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 0.00 5.21 0.00 0.00 10.36 0.00 4.36 4.77 0.00 0.00 0.00 0.00 0.00 0.00 24 E1a_E7a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 15.36 4.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER2a ExonRegion 0 6.99 0.00 0.00 2.61 3.24 0.75 2.28 2.07 1.96 0.58 10.12 3.57 4.63 5.91 4.62 15.65 2.24 0.00 0.00 0.87 1.35 2.38 2.83 26 E2_Da KnownBoundary 0 81.42 0.00 0.00 3.60 25.04 0.00 9.76 5.09 6.89 1.50 27.11 0.00 21.10 7.42 0.00 43.66 0.00 0.00 0.00 0.00 0.00 6.18 3.84 27 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER2b ExonRegion 0 14.15 0.12 0.54 1.40 6.83 1.30 3.81 5.66 0.74 0.64 4.88 6.86 11.61 2.55 3.03 10.60 5.67 0.00 0.00 0.00 0.00 1.59 0.92 29 ER3a ExonRegion 1 94.27 1.64 18.94 37.10 102.68 19.45 17.39 102.58 69.42 25.85 147.38 64.74 70.69 240.37 205.70 495.72 121.59 0.00 0.00 0.00 6.59 142.50 53.80 30 E3_Da NovelBoundary 1 101.43 0.00 12.98 32.03 333.11 51.56 50.70 84.49 61.11 31.67 115.77 98.28 100.97 169.76 61.56 154.15 114.07 0.00 0.00 0.00 9.51 71.40 19.89 31 E3b_E4a KnownJunction 0 119.43 0.00 21.67 21.11 452.55 108.63 95.74 102.27 53.73 17.08 135.19 49.52 122.72 137.21 93.21 111.68 126.41 0.00 0.00 0.00 5.50 33.68 32.27 32 E3b_E5a KnownJunction 0 3.78 0.00 0.00 0.00 38.79 4.88 2.25 0.00 0.00 0.00 17.90 0.00 19.80 23.25 17.80 19.40 15.52 0.00 0.00 0.00 0.00 0.00 0.00 33 E3b_E7a KnownJunction 0 0.00 0.00 0.00 4.10 3.57 0.00 1.72 0.00 1.45 2.63 7.84 0.00 13.64 15.66 8.90 14.70 12.25 0.00 0.00 0.00 0.00 2.45 0.00 34 ER3b ExonRegion 0 88.31 0.00 17.37 31.68 358.09 81.57 67.11 93.22 55.84 28.55 143.63 64.64 130.03 160.62 80.13 141.53 132.26 0.00 0.00 0.00 5.24 48.64 27.44 35 I3_AR2 ActiveIntronRegion 0 21.07 0.00 0.62 2.32 8.79 1.24 3.10 12.62 3.12 1.05 17.97 6.63 20.39 12.52 15.22 28.61 18.51 0.00 0.00 0.00 0.36 1.59 1.58 36 I3_SR2 SilentIntronRegion 0 28.34 0.00 0.00 1.35 12.34 1.16 4.21 7.19 2.20 2.08 16.19 9.68 16.93 9.50 11.22 33.72 8.59 0.00 0.00 0.00 0.00 1.32 2.19 37 ER4a ExonRegion 0 128.62 4.73 26.27 29.57 400.93 129.47 92.99 117.70 57.96 25.39 158.18 86.09 122.60 162.30 106.33 173.83 154.84 0.00 0.00 0.00 6.10 56.16 30.25 38 E4_Da KnownBoundary 0 119.50 0.00 0.00 8.76 27.50 0.00 10.38 19.63 3.41 3.06 28.85 11.85 47.72 9.30 24.48 49.99 21.88 0.00 0.00 0.00 0.00 8.14 0.00 39 E4a_E5a KnownJunction 1 107.95 13.02 25.69 27.84 353.14 118.23 91.68 101.17 51.76 23.42 133.72 139.40 125.64 164.40 66.88 162.95 137.82 0.00 0.00 0.00 5.50 105.81 15.19 40 ER4b ExonRegion 0 71.67 0.60 1.08 4.91 15.71 3.24 8.08 13.17 4.99 3.39 23.05 21.67 40.11 15.06 18.18 31.71 16.25 0.00 0.00 0.00 0.00 5.58 0.09 41 I4 Intron 0 58.63 0.14 1.87 5.82 18.44 3.07 5.74 17.22 4.77 1.87 16.75 18.06 34.85 18.86 21.94 36.71 15.88 0.00 0.00 0.07 0.00 2.49 1.80 42 I4_SR1 SilentIntronRegion 0 46.95 0.10 1.68 5.51 16.46 2.93 5.90 17.59 4.99 2.32 19.47 19.90 38.47 21.04 24.19 41.89 16.15 0.00 0.00 0.00 0.00 2.72 2.42 43 I4_AR1 ActiveIntronRegion 0 86.65 0.24 2.32 6.58 23.20 3.39 5.36 16.38 4.26 0.79 10.28 13.72 26.29 13.70 16.60 24.40 15.25 0.00 0.00 0.25 0.00 1.93 0.34 44 E5_Aa NovelBoundary 1 106.46 9.67 1.33 11.69 52.46 2.90 20.98 16.80 4.46 3.30 14.95 51.02 52.27 28.61 10.63 50.33 12.16 0.00 0.00 0.00 0.00 6.25 0.00 45 ER5a ExonRegion 0 342.31 4.49 29.05 57.67 209.07 54.93 46.09 139.77 75.80 29.80 202.46 134.25 210.52 254.15 166.45 342.81 178.50 0.00 0.00 1.03 7.85 123.60 26.63 46 E5_Da KnownBoundary 0 17.04 0.00 0.00 4.00 0.00 2.84 0.00 4.93 4.46 0.00 2.11 6.00 13.64 0.00 15.08 12.30 0.00 0.00 0.00 0.00 0.00 2.51 0.00 47 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E5a_E7a KnownJunction 0 714.13 3.35 28.38 69.89 208.91 20.67 34.58 183.44 76.42 29.66 154.88 132.49 266.38 218.44 148.34 375.29 168.49 0.00 0.00 0.00 11.06 127.00 31.67 49 ER5b ExonRegion 0 23.76 0.00 0.00 2.40 2.11 0.83 3.73 2.29 2.91 1.13 3.02 1.52 5.35 7.82 6.50 6.03 7.35 0.00 0.00 0.00 0.00 0.29 0.00 50 ER6a ExonRegion 0 22.13 0.00 0.00 0.00 13.91 0.56 4.07 7.91 1.13 1.05 1.80 1.10 1.19 8.59 5.66 14.54 5.09 0.00 0.00 0.65 0.00 0.00 0.04 51 ER7a ExonRegion 0 682.07 2.91 35.71 88.27 339.80 53.17 61.87 230.58 107.30 36.74 192.01 298.03 433.76 264.17 219.36 302.10 188.13 0.34 0.00 0.00 4.84 139.61 25.58 52 E7_Da KnownBoundary 0 292.42 0.00 31.84 35.73 89.47 7.78 12.19 171.36 53.53 15.53 100.92 209.47 185.22 89.35 89.25 224.64 143.90 0.00 0.00 0.00 0.00 78.20 4.18 53 E7a_E7b KnownJunction 0 0.00 0.00 22.26 32.16 0.00 0.00 0.00 150.29 43.14 28.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 E7_Ab KnownBoundary 0 258.79 0.00 20.16 29.90 145.25 30.32 26.85 116.49 45.20 22.94 146.19 77.28 88.47 44.44 38.57 161.33 83.22 0.00 0.00 0.00 3.15 55.66 15.28 55 ER7b ExonRegion 0 542.18 0.00 58.00 73.14 227.88 36.68 38.17 302.48 109.51 42.63 284.14 425.01 422.10 248.49 206.47 426.00 251.42 0.00 0.00 0.00 4.04 135.08 19.09 56 ER7c ExonRegion 0 475.97 0.24 36.42 73.76 300.16 39.40 63.32 235.35 95.47 46.23 267.14 256.97 367.06 197.86 181.16 239.96 271.89 0.90 0.00 0.00 3.47 124.77 15.72 57 E7_Db KnownBoundary 0 744.43 2.57 31.13 88.67 376.23 67.69 91.11 190.99 89.73 52.78 201.79 282.39 407.12 203.54 188.64 198.24 220.76 2.57 0.00 0.00 3.03 134.04 8.28 58 ER7d ExonRegion 0 446.93 3.46 33.31 43.20 265.05 33.74 45.17 172.71 67.10 27.59 146.64 192.78 282.43 181.83 237.90 206.51 126.34 0.53 0.21 0.84 2.37 88.85 18.00 59 E7_Dc KnownBoundary 0 47.42 0.00 7.81 3.76 29.37 0.00 1.99 52.45 22.34 8.73 7.74 6.30 20.13 11.36 54.27 35.63 7.95 0.00 0.00 0.00 0.00 27.56 0.00 60 ER7e ExonRegion 1 84.43 0.67 4.37 9.12 56.17 2.43 8.62 25.41 12.46 4.16 3.94 19.85 26.28 21.89 26.83 21.83 5.62 0.00 0.00 0.00 0.00 25.21 4.86