Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BCL6 Gene 0 43.37 3.65 17.50 14.77 25.72 15.77 5.51 113.78 99.13 14.99 4.60 9.81 2.65 1.21 2.24 9.93 0.40 18.92 0.82 0.93 92.58 246.91 206.32 2 406870 Transcript 0 7.68 0.00 0.61 0.00 5.16 0.00 0.96 1.23 1.24 0.00 0.69 0.00 0.00 0.00 0.00 1.41 0.00 0.00 0.00 0.00 0.79 0.50 5.12 3 470319 Transcript 0 4.79 0.00 2.41 0.00 3.96 0.88 1.21 4.40 8.59 1.23 0.00 0.00 0.00 0.00 0.25 0.00 0.00 0.00 0.77 0.00 0.80 10.63 12.61 4 442910 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 496823 Transcript 0 10.02 1.64 4.47 0.57 8.21 1.27 0.92 27.00 24.90 3.11 0.00 0.00 0.00 0.00 0.00 0.41 0.00 8.26 0.43 0.00 13.18 29.82 47.25 6 480458 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 438077 Transcript 0 12.41 0.60 4.55 1.78 1.57 1.34 0.78 13.96 7.26 1.86 0.00 0.00 0.00 0.00 0.00 0.44 0.00 1.01 0.00 0.00 15.27 16.89 32.48 8 419510 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 232014 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 430339 Transcript 0 4.13 3.97 0.24 2.23 2.15 1.79 0.48 11.05 6.02 0.50 0.47 2.11 0.23 0.08 0.07 1.59 0.08 1.26 0.00 0.10 11.72 31.20 48.20 11 450123 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 479110 Transcript 0 5.33 0.28 0.50 0.00 4.83 2.77 0.91 7.67 13.80 0.00 0.26 0.00 0.00 0.00 0.00 0.41 0.00 1.01 0.00 0.29 13.10 21.83 29.81 13 ER1a ExonRegion 0 0.84 0.00 0.00 0.00 0.00 0.00 0.40 0.00 0.36 0.00 0.00 0.00 0.00 0.00 0.00 0.70 0.00 0.00 0.00 0.00 0.00 0.10 0.59 14 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 6.76 0.00 3.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.21 1.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 2.66 5.69 0.00 16 ER1b ExonRegion 0 0.65 0.00 0.00 0.00 0.00 2.96 5.30 0.40 2.85 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.85 0.00 0.00 3.39 6.09 4.29 17 ER1c ExonRegion 0 48.87 4.34 1.39 6.69 20.92 36.26 6.68 14.93 27.68 1.88 7.38 0.00 4.69 5.09 0.66 32.69 2.40 11.59 0.00 1.55 91.25 300.12 413.93 18 E1_Da NovelBoundary 0 12.15 0.00 7.07 2.06 59.51 9.71 12.23 10.10 15.71 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.27 0.00 0.00 8.96 13.66 29.96 19 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.85 8.10 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.63 0.00 0.00 0.00 0.00 0.00 20 E1a_E4b KnownJunction 0 131.21 21.51 6.98 18.45 60.78 74.05 14.66 37.66 87.88 6.66 22.85 0.00 0.00 2.18 0.00 76.48 3.65 24.37 0.00 2.49 263.11 764.87 1082.92 21 ER1d ExonRegion 0 94.46 14.54 4.31 10.90 43.21 66.97 10.25 30.92 68.39 6.03 19.33 0.00 9.38 5.53 2.90 61.09 3.30 24.09 0.00 2.13 221.02 619.04 874.25 22 Ix_AR1 ActiveIntronRegion 0 10.81 0.62 2.64 1.75 4.60 3.15 2.28 9.66 16.81 1.16 0.36 1.09 0.24 0.00 0.18 0.36 0.00 3.62 1.17 0.37 12.62 24.81 35.36 23 I1 Intron 0 7.50 1.41 4.94 2.44 4.95 3.40 2.26 20.38 22.97 2.65 0.20 1.22 0.16 0.08 0.15 1.03 0.00 5.27 0.60 0.49 19.47 45.30 57.55 24 I1_SR1 SilentIntronRegion 0 13.78 1.89 5.55 2.60 7.31 7.77 3.12 28.84 26.27 1.90 0.00 3.31 1.19 0.00 0.02 0.86 0.00 7.45 0.00 0.00 24.36 56.61 70.44 25 I1_AR2 ActiveIntronRegion 0 10.06 1.43 5.25 2.35 5.13 3.21 3.91 28.89 26.76 3.30 0.00 1.39 0.24 0.17 0.47 0.74 0.00 3.73 0.92 1.07 15.91 61.17 64.45 26 I1_SR2 SilentIntronRegion 0 5.26 1.96 3.23 1.97 7.79 1.83 1.77 21.89 20.34 2.48 0.00 0.00 0.00 0.00 0.52 2.12 0.00 4.72 0.96 0.00 13.78 41.80 49.78 27 I1_AR3 ActiveIntronRegion 0 7.77 1.48 6.15 2.60 5.19 3.52 1.94 19.73 24.61 2.99 0.27 0.82 0.09 0.07 0.04 1.25 0.00 6.88 0.49 0.42 24.26 43.73 63.57 28 E2_Aa NovelBoundary 0 10.37 5.59 12.42 1.76 4.33 0.00 4.06 51.01 28.67 11.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 14.58 41.15 65.99 29 ER2a ExonRegion 0 24.83 1.19 7.57 3.56 3.14 2.69 1.56 27.92 12.95 3.73 0.00 0.00 0.00 0.00 0.00 0.87 0.00 2.02 0.00 0.00 22.13 28.75 52.42 30 E2_Da NovelBoundary 0 17.71 0.00 5.50 5.09 8.66 2.90 0.00 42.18 33.10 1.05 0.00 0.00 0.00 0.00 0.00 3.59 0.00 9.62 0.00 0.00 44.23 31.17 47.29 31 E2a_E4b KnownJunction 0 0.00 0.00 1.54 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.40 5.02 12.55 32 I2 Intron 0 10.18 0.49 2.20 0.98 6.44 2.65 1.27 24.17 18.15 1.23 0.00 0.00 0.00 0.00 0.49 0.00 0.00 4.86 0.00 0.00 19.10 45.62 62.87 33 I2_AR1 ActiveIntronRegion 0 12.13 0.58 2.62 1.16 7.67 3.15 1.52 28.78 21.62 1.47 0.00 0.00 0.00 0.00 0.59 0.00 0.00 5.79 0.00 0.00 22.74 54.34 74.87 34 E3_Aa NovelBoundary 0 32.38 0.00 6.36 1.56 21.14 2.10 2.03 46.33 33.68 4.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.61 0.00 0.00 19.83 97.79 85.79 35 ER3a ExonRegion 0 20.04 3.28 8.94 1.14 16.41 2.55 1.84 49.15 41.69 4.55 0.00 0.00 0.00 0.00 0.00 0.81 0.00 9.88 0.87 0.00 26.35 59.64 94.51 36 E3_Ab KnownBoundary 0 20.37 0.00 6.71 0.00 4.33 0.00 4.50 80.63 52.92 5.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.63 0.00 0.00 19.95 92.03 139.57 37 ER3b ExonRegion 0 31.30 3.20 9.34 5.69 12.78 5.34 3.48 60.41 51.70 5.48 0.92 0.70 0.00 0.00 0.20 2.34 0.00 14.37 0.00 1.21 33.97 82.51 115.25 38 E3_Ac KnownBoundary 0 36.30 0.00 15.55 5.93 35.65 2.61 1.77 89.99 73.73 5.59 5.37 0.00 0.00 0.00 0.00 0.00 0.00 13.60 0.00 2.43 66.78 132.82 123.95 39 ER3c ExonRegion 0 48.98 5.00 11.49 12.33 28.03 12.55 5.03 120.16 83.76 8.39 1.50 3.33 0.00 0.18 0.27 0.79 0.00 15.58 0.41 1.74 48.26 146.66 141.02 40 E3_Da KnownBoundary 0 62.68 14.93 7.27 23.04 11.29 5.79 3.44 125.32 82.32 10.45 2.53 0.00 0.00 0.00 0.00 0.00 0.00 14.05 0.00 0.00 48.68 95.10 132.31 41 ER3d ExonRegion 0 63.43 7.78 6.27 27.02 32.77 14.50 3.55 126.98 87.45 15.62 1.36 1.61 0.00 0.00 0.00 0.64 0.00 26.10 3.42 0.22 50.91 149.09 140.78 42 E3b_E4b KnownJunction 0 77.20 12.50 1.54 20.78 26.32 11.53 4.06 133.70 82.38 7.12 0.00 0.00 0.00 0.00 0.00 4.36 0.00 25.58 0.00 2.43 41.02 123.26 111.65 43 ER4a ExonRegion 0 4.13 3.97 0.24 2.23 2.15 1.79 0.48 11.05 6.02 0.50 0.47 2.11 0.23 0.08 0.07 1.59 0.08 1.26 0.00 0.10 11.72 31.20 48.20 44 E4_Ab KnownBoundary 0 0.00 9.60 5.14 2.06 0.00 0.00 0.00 16.96 11.43 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.20 23.94 53.61 45 ER4b ExonRegion 0 99.31 15.04 10.90 35.44 61.82 28.23 14.81 175.53 178.02 17.63 7.43 4.79 0.74 1.41 0.23 24.32 0.61 51.10 2.93 2.52 196.88 442.47 550.62 46 E4_Da KnownBoundary 0 26.30 0.00 3.67 1.80 4.16 0.00 3.97 4.76 9.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 4.35 47 E4a_E5a KnownJunction 0 68.83 2.83 6.09 25.01 37.95 4.88 11.97 104.66 121.32 16.79 0.00 6.30 0.00 2.47 0.00 0.00 0.00 34.61 4.42 0.00 106.26 202.87 251.74 48 ER4c ExonRegion 0 4.79 0.00 2.41 0.00 3.96 0.88 1.21 4.40 8.59 1.23 0.00 0.00 0.00 0.00 0.25 0.00 0.00 0.00 0.77 0.00 0.80 10.63 12.61 49 ER5a ExonRegion 0 64.42 3.52 10.57 26.34 20.83 20.30 11.14 149.95 147.50 17.36 6.88 10.66 3.32 2.58 2.31 27.36 2.91 44.22 0.30 1.97 154.78 472.13 425.66 50 E5a_E6a KnownJunction 0 85.35 14.73 13.36 28.40 66.81 29.13 5.39 229.23 196.73 17.35 0.00 24.16 13.64 0.00 5.19 39.22 0.00 50.78 0.00 0.00 129.86 471.19 553.41 51 E5a_E6b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.99 6.12 0.00 52 ER6a ExonRegion 0 57.08 11.78 17.49 30.85 67.06 57.66 10.26 203.49 186.62 24.34 5.55 32.99 3.05 2.81 3.78 23.21 0.89 61.59 0.00 1.86 194.38 431.72 365.64 53 E6_Ab KnownBoundary 0 94.39 12.70 25.52 43.72 71.14 59.45 11.26 227.92 173.52 36.40 7.26 25.21 0.00 2.47 4.45 24.18 4.21 63.92 0.00 6.39 188.61 460.97 311.15 54 ER6b ExonRegion 0 66.67 9.94 24.72 39.37 40.56 43.43 11.43 213.88 174.74 34.33 8.52 24.94 2.08 0.31 9.26 17.43 1.35 45.86 0.00 1.14 188.42 448.08 298.60 55 E6_Da KnownBoundary 0 46.90 3.22 15.26 21.91 4.16 15.50 2.21 142.24 134.66 13.97 0.00 7.65 0.00 0.00 0.00 8.20 0.00 16.58 0.00 3.00 76.73 236.06 106.02 56 E6_Db KnownBoundary 0 88.98 11.31 6.89 13.65 29.03 10.73 8.17 100.30 111.46 14.32 9.90 24.61 6.49 2.12 9.89 10.68 0.00 16.50 0.00 0.00 115.21 294.23 230.57 57 ER6c ExonRegion 0 70.41 6.51 15.68 26.80 21.05 21.03 8.83 197.97 203.71 23.70 5.03 22.51 8.44 1.08 6.58 9.11 0.00 39.67 0.00 0.00 137.51 356.56 216.33 58 ER6d ExonRegion 0 73.47 6.80 16.22 25.00 27.04 19.54 17.00 224.15 197.49 28.91 11.70 29.28 12.34 1.11 6.03 20.41 0.00 55.48 0.00 0.73 219.68 475.10 336.40 59 E6_Dc NovelBoundary 0 45.86 2.30 11.15 12.95 27.67 18.51 19.83 135.75 99.68 21.25 9.37 17.86 0.00 0.00 0.00 14.44 0.00 37.89 0.00 0.00 193.80 410.63 258.56 60 E6d_E7a KnownJunction 0 89.35 9.47 32.20 34.16 18.34 22.77 15.68 272.40 193.69 36.48 12.16 38.56 6.82 2.47 0.00 19.82 0.00 56.13 0.00 3.26 230.43 704.98 492.12 61 ER6e ExonRegion 0 65.85 4.97 23.01 31.57 16.80 21.19 15.81 248.03 193.09 32.24 16.11 36.56 4.95 1.35 0.97 22.95 0.00 57.79 1.77 2.13 247.79 632.70 412.60 62 ER7a ExonRegion 0 64.58 4.78 29.18 19.28 25.99 27.70 6.56 220.04 203.31 31.37 12.41 19.53 7.85 3.31 4.87 23.08 0.80 42.37 2.86 1.98 216.60 514.72 441.10 63 E7_Ab KnownBoundary 0 87.27 6.64 27.38 15.68 18.93 33.39 6.36 194.03 194.30 31.56 5.26 11.70 0.00 0.00 0.00 18.11 0.00 39.34 0.00 0.00 154.44 400.22 349.05 64 ER7b ExonRegion 0 42.81 2.99 24.65 15.20 20.96 22.40 4.87 158.62 167.78 30.42 11.13 11.66 2.92 4.85 4.39 10.88 0.00 25.91 3.24 0.37 202.10 317.84 302.17 65 E7a_E8a KnownJunction 0 70.31 2.83 38.64 15.25 33.53 24.70 6.58 187.83 182.64 41.29 2.32 12.45 0.00 9.54 0.00 12.05 0.00 23.13 4.80 3.26 139.62 283.20 243.46 66 ER8a ExonRegion 0 39.17 5.79 21.57 23.88 21.78 28.48 4.30 198.73 185.96 37.31 6.61 17.04 6.62 3.36 6.46 21.51 0.00 36.07 2.75 2.46 213.71 369.40 399.54 67 E8a_E9a KnownJunction 0 49.05 0.00 33.03 25.64 16.21 22.26 0.00 257.41 220.83 42.58 4.63 18.91 6.82 4.94 8.90 35.38 0.00 46.76 4.14 3.20 228.08 380.32 346.32 68 E8a_E10a KnownJunction 0 7.04 0.00 1.21 1.30 3.90 0.00 0.00 14.33 12.12 2.53 0.00 0.00 6.82 0.00 0.00 4.10 0.00 0.00 0.00 0.00 14.64 44.88 20.32 69 ER9a ExonRegion 0 41.59 4.29 25.23 19.75 22.49 26.69 4.48 193.61 165.76 25.21 5.72 12.29 5.08 1.63 5.73 17.67 0.00 31.96 0.25 2.82 197.10 362.32 310.22 70 E9a_E10a KnownJunction 0 38.01 0.00 37.43 19.71 60.95 25.55 11.08 238.31 177.23 26.67 7.21 5.85 0.00 2.47 8.90 16.75 0.00 57.00 0.00 0.00 210.97 344.62 291.00 71 E10_Ab NovelBoundary 0 30.60 0.00 13.96 15.18 18.76 25.89 3.36 144.29 103.24 17.35 0.00 10.95 0.00 0.00 0.00 6.49 0.00 31.50 0.00 0.00 83.03 159.88 148.19 72 ER10a ExonRegion 0 59.56 1.45 35.19 20.44 42.05 39.03 11.35 232.85 169.56 29.33 3.87 11.75 4.69 1.62 5.80 24.63 0.00 54.90 0.00 0.00 225.72 434.56 369.60 73 ER10b ExonRegion 0 77.41 5.48 34.02 23.77 46.09 44.51 7.78 231.96 181.94 33.56 7.93 16.65 8.13 1.91 4.56 21.52 0.00 48.41 0.00 1.48 221.79 454.93 494.94 74 E10a_E11a KnownJunction 0 77.42 5.72 56.56 28.63 61.46 61.56 2.25 212.27 188.77 45.69 10.00 0.00 0.00 0.00 4.45 31.87 0.00 62.35 0.00 3.00 217.83 426.61 463.01 75 ER11a ExonRegion 0 24.51 1.75 43.70 23.15 39.81 30.14 6.80 189.80 187.31 33.54 10.21 11.45 2.21 0.46 4.50 28.36 2.44 39.45 0.00 0.25 173.47 427.53 507.44 76 E11_Da KnownBoundary 0 7.26 0.00 0.00 0.00 3.57 0.00 0.00 4.03 5.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 16.72 21.26 77 E11a_E12a KnownJunction 0 54.97 5.53 50.18 35.33 75.30 29.30 3.89 244.19 238.16 58.91 12.06 30.46 6.82 4.89 0.00 26.06 0.00 44.06 0.00 0.00 227.40 579.82 619.31 78 ER11b ExonRegion 0 5.33 0.28 0.50 0.00 4.83 2.77 0.91 7.67 13.80 0.00 0.26 0.00 0.00 0.00 0.00 0.41 0.00 1.01 0.00 0.29 13.10 21.83 29.81 79 E11_Db NovelBoundary 0 14.60 0.00 6.98 3.50 23.51 8.01 1.81 11.87 15.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.41 13.04 19.55 80 Ix Intron 0 16.51 0.90 4.75 1.91 7.40 2.74 1.54 15.39 17.21 1.32 1.18 1.42 0.64 0.00 0.00 1.32 0.37 0.86 0.00 0.00 7.56 32.50 32.16 81 Ix_SR1 SilentIntronRegion 0 14.80 0.79 3.70 1.88 6.57 2.83 1.10 13.68 14.75 1.39 1.04 1.47 0.61 0.00 0.00 1.63 0.52 0.36 0.00 0.00 5.28 33.72 27.25 82 Ix_AR1 ActiveIntronRegion 0 21.29 1.18 7.47 2.05 9.72 2.61 2.67 20.12 23.86 1.21 1.56 1.37 0.75 0.00 0.00 0.58 0.00 2.14 0.00 0.00 13.44 30.57 45.41 83 ER12a ExonRegion 0 38.38 5.63 45.18 33.75 52.98 23.78 4.59 228.21 238.29 51.38 13.01 25.11 13.29 2.71 0.00 29.42 0.00 46.01 0.00 0.00 235.58 482.47 557.28 84 ER12b ExonRegion 0 61.45 5.86 34.07 25.86 27.11 24.94 6.35 149.59 155.76 24.50 7.95 12.59 5.04 1.52 3.38 19.30 1.94 20.64 0.00 0.00 187.45 298.15 336.06 85 E12_Db KnownBoundary 0 88.02 3.35 23.57 36.56 32.34 16.69 7.51 134.97 104.95 6.61 10.06 23.11 0.00 0.00 0.00 7.60 0.00 8.91 0.00 0.00 101.13 257.98 285.11 86 ER12c ExonRegion 0 66.21 3.95 27.52 24.25 56.47 14.51 10.07 114.76 84.10 11.86 3.62 17.95 1.99 1.06 2.39 5.29 0.17 3.37 0.32 0.43 30.31 302.72 96.57 87 ER12d ExonRegion 0 70.55 2.03 3.68 1.36 24.08 2.45 2.65 8.64 10.29 0.00 1.93 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 15.43 9.03 23.49 88 ER12e ExonRegion 0 14.51 0.00 1.23 0.00 10.32 0.00 1.51 2.47 2.12 0.00 1.38 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 1.57 0.89 9.65