Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LEPREL1 Gene 0 22.78 1.50 6.63 1.90 8.86 3.32 3.52 8.51 7.49 3.69 0.16 117.02 44.60 0.49 1.05 0.32 27.48 0.49 0.12 1.06 10.06 16.40 9.25 2 427335 Transcript 0 0.23 0.00 0.40 0.00 0.00 0.00 0.00 0.84 0.20 0.00 0.00 0.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 426003 Transcript 0 0.00 0.00 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.64 0.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 319332 Transcript 0 9.61 0.10 0.76 0.15 4.21 1.38 0.79 5.05 4.30 2.25 0.00 27.06 21.12 0.00 0.06 0.00 14.91 0.94 0.00 0.11 6.86 3.63 4.13 5 444866 Transcript 0 0.00 0.00 0.00 0.00 0.99 0.00 0.46 0.00 0.01 0.07 0.00 6.59 6.59 0.00 0.00 0.00 1.17 0.00 0.00 0.00 0.00 0.00 0.00 6 470925 Transcript 0 2.77 0.04 3.68 0.03 0.14 0.08 0.76 2.19 0.15 0.69 0.00 13.52 12.28 0.00 0.03 0.00 2.45 0.00 0.00 0.02 4.79 2.34 1.85 7 475095 Transcript 0 1.65 0.02 0.04 0.01 1.21 0.00 0.02 0.04 0.05 0.02 0.00 4.73 0.76 0.00 0.00 0.00 0.14 0.00 0.00 0.00 0.07 0.11 0.89 8 482780 Transcript 0 3.44 0.00 2.19 0.00 0.26 0.27 0.10 0.70 0.31 0.25 0.00 9.48 4.77 0.00 0.00 0.00 0.68 0.26 0.00 0.00 0.06 0.09 0.07 9 467131 Transcript 0 3.55 0.00 0.08 0.03 0.47 0.00 0.04 0.11 1.87 1.13 0.00 7.37 4.31 0.00 0.00 0.00 0.33 0.00 0.00 0.01 0.11 0.16 0.15 10 463171 Transcript 0 5.91 2.91 0.00 0.58 2.73 1.31 4.74 0.59 0.27 0.57 1.77 7.23 8.63 4.92 9.47 3.04 3.71 1.22 1.30 4.35 3.83 1.92 5.05 11 490940 Transcript 0 1.23 0.08 0.46 0.11 1.11 0.46 0.33 0.36 0.87 0.24 0.00 9.38 1.17 0.00 0.00 0.00 1.38 0.08 0.00 0.18 0.73 1.04 0.24 12 ER1a ExonRegion 0 0.46 0.00 0.81 0.01 0.00 0.00 0.00 1.68 0.40 0.00 0.00 0.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 0 0.00 0.00 0.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.28 1.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER3a ExonRegion 0 1.27 0.31 0.71 0.46 1.00 0.80 0.40 1.78 1.39 0.87 0.00 8.84 4.85 0.00 0.18 0.00 12.71 0.25 0.00 0.32 6.75 2.28 2.72 17 E3a_E5a KnownJunction 0 9.71 0.00 1.24 0.00 6.96 2.44 0.00 13.14 11.52 5.88 0.00 55.52 45.61 0.00 0.00 0.00 28.05 2.57 0.00 0.00 12.73 8.27 8.45 18 I3_SR1 SilentIntronRegion 0 1.69 0.00 1.55 0.70 0.67 0.00 0.71 1.19 1.06 1.58 0.00 34.25 7.15 0.00 0.00 0.00 1.14 0.00 0.00 0.74 0.00 0.00 1.59 19 I3_AR1 ActiveIntronRegion 0 5.06 0.00 4.94 0.00 0.54 0.00 0.73 0.95 1.44 0.41 0.00 38.12 13.68 0.00 0.00 0.00 0.83 0.00 0.00 0.50 0.00 0.00 1.97 20 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 1.98 0.00 0.92 0.00 0.02 0.13 0.00 13.18 13.19 0.00 0.00 0.00 2.34 0.00 0.00 0.00 0.00 0.00 0.00 21 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER5a ExonRegion 0 7.57 1.24 3.63 2.15 3.17 3.81 3.48 10.38 11.69 8.93 0.00 122.41 66.70 0.45 1.48 0.00 47.12 2.96 0.00 1.42 24.04 11.98 12.51 23 E5a_E6a KnownJunction 0 17.19 2.63 1.15 3.20 7.47 0.00 9.49 8.38 5.21 10.29 0.00 111.34 105.84 0.00 0.00 0.00 79.38 0.00 0.00 0.00 13.53 13.90 3.76 24 ER6a ExonRegion 0 13.33 0.64 4.41 1.91 11.79 5.23 3.57 9.50 11.77 6.69 0.00 204.46 90.81 0.36 1.33 0.00 80.33 1.68 0.00 1.14 25.66 23.81 17.84 25 E6a_E7a KnownJunction 0 14.60 0.00 7.33 3.70 15.03 13.97 4.37 8.46 8.51 4.24 0.00 155.15 114.44 0.00 0.00 0.00 106.59 0.00 0.00 0.00 14.76 20.57 3.84 26 I6_AR1 ActiveIntronRegion 0 0.46 0.00 0.00 1.36 0.00 0.00 0.92 0.00 2.15 0.30 0.00 41.79 18.96 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 3.35 1.28 27 I6_AR2 ActiveIntronRegion 0 3.03 0.83 0.00 0.27 1.09 0.89 0.50 1.68 1.81 1.10 0.00 26.27 7.88 0.00 0.00 0.00 5.04 0.00 0.00 0.35 0.72 3.13 1.38 28 ER7a ExonRegion 0 16.33 4.76 4.43 4.54 11.18 6.31 4.98 6.47 13.78 2.73 0.00 223.81 107.64 0.00 1.52 0.00 70.17 0.00 0.00 1.29 22.78 28.78 20.67 29 E7_Da NovelBoundary 0 0.00 2.57 2.25 0.00 3.31 0.00 1.72 3.20 7.26 2.07 0.00 75.17 0.00 0.00 0.00 0.00 28.61 0.00 0.00 0.00 10.19 7.10 9.99 30 E7b_E8b KnownJunction 0 26.97 0.00 3.28 2.86 17.15 0.00 7.55 7.64 6.08 4.75 0.00 181.41 35.06 0.00 5.56 0.00 67.79 0.00 0.00 3.20 28.60 17.39 31.07 31 ER7b ExonRegion 1 22.49 4.32 2.45 3.07 13.38 0.46 5.30 6.27 7.41 3.44 0.00 202.40 34.59 0.00 2.90 0.00 72.21 0.00 0.00 2.13 25.07 15.11 30.10 32 ER8a ExonRegion 0 2.77 0.04 3.68 0.03 0.14 0.08 0.76 2.19 0.15 0.69 0.00 13.52 12.28 0.00 0.03 0.00 2.45 0.00 0.00 0.02 4.79 2.34 1.85 33 E8_Ab KnownBoundary 0 7.26 0.00 4.94 0.00 0.00 0.00 0.00 3.94 0.00 1.42 0.00 18.76 26.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER8b ExonRegion 0 29.99 0.69 7.11 2.67 13.06 8.12 7.18 6.32 11.87 2.80 0.00 188.55 101.53 0.00 0.27 0.00 61.60 0.00 0.00 2.07 23.87 25.97 14.50 35 E8a_E9a KnownJunction 0 46.53 0.00 11.74 0.00 15.03 7.84 1.72 7.64 12.33 2.90 0.00 181.86 40.26 0.00 0.00 0.00 84.71 0.00 0.00 3.13 17.79 20.82 15.96 36 ER9a ExonRegion 0 25.75 1.02 7.22 0.88 18.58 3.12 2.91 16.00 13.56 5.53 0.00 232.35 61.28 0.00 0.00 0.00 63.74 0.00 0.00 3.52 28.65 28.71 22.51 37 E9a_E10a KnownJunction 1 20.89 3.35 1.57 1.63 55.18 2.90 4.33 16.84 10.65 7.25 0.00 179.31 20.45 0.00 0.00 0.00 38.71 0.00 0.00 6.26 30.21 30.80 0.00 38 ER10a ExonRegion 0 25.97 9.23 8.07 1.50 28.91 1.25 4.91 13.87 14.67 8.03 0.00 201.69 61.08 0.00 0.00 0.00 42.51 0.00 0.00 1.92 22.41 38.62 8.38 39 E10a_E11b KnownJunction 0 40.53 9.74 14.10 2.96 12.39 0.00 6.76 10.02 16.84 7.25 0.00 174.21 79.38 0.00 0.00 0.00 46.19 0.00 0.00 0.00 17.85 48.56 14.34 40 ER11a ExonRegion 0 1.65 0.02 0.04 0.01 1.21 0.00 0.02 0.04 0.05 0.02 0.00 4.73 0.76 0.00 0.00 0.00 0.14 0.00 0.00 0.00 0.07 0.11 0.89 41 E11_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER11b ExonRegion 0 27.99 3.55 15.71 4.65 15.14 7.34 5.69 16.44 13.13 12.04 0.00 257.28 64.86 0.00 0.00 0.00 72.20 0.00 0.00 1.99 24.80 34.64 20.53 43 E11_Da NovelBoundary 0 11.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 E11a_E12a KnownJunction 0 26.23 5.59 15.26 1.56 15.79 14.48 9.80 23.82 15.02 15.39 0.00 224.77 86.84 0.00 0.00 0.00 48.06 2.32 0.00 3.26 28.11 48.37 7.68 45 ER12a ExonRegion 0 20.38 4.75 9.58 1.31 9.85 9.28 4.63 19.27 9.52 9.22 0.00 215.78 50.64 0.00 0.00 0.00 53.60 0.31 0.00 1.22 17.51 28.39 11.77 46 E12_Da NovelBoundary 0 6.45 0.00 6.77 0.00 3.48 0.00 3.89 1.89 5.03 9.78 0.00 91.08 12.99 0.00 0.00 0.00 16.08 0.00 0.00 0.00 7.60 5.08 3.93 47 E12c_E13b KnownJunction 1 52.90 0.00 29.36 1.63 29.20 8.69 0.00 27.03 16.41 12.06 0.00 234.38 27.11 0.00 0.00 0.00 73.68 2.57 0.00 0.00 29.22 24.55 31.16 48 ER12b ExonRegion 1 25.40 0.00 20.83 1.36 8.03 5.50 2.65 20.74 14.82 11.47 0.00 239.85 28.14 0.00 0.00 0.00 52.15 1.85 0.00 0.00 20.27 13.33 19.97 49 ER12c ExonRegion 1 33.23 0.00 21.69 1.36 22.48 6.23 2.12 20.74 13.34 10.78 0.00 218.21 28.61 0.00 0.00 0.00 60.08 1.85 0.00 0.00 20.94 27.29 22.32 50 ER13a ExonRegion 0 6.56 0.00 3.83 0.01 0.13 0.55 0.00 1.40 0.07 0.50 0.00 13.94 6.82 0.00 0.00 0.00 0.35 0.51 0.00 0.00 0.12 0.19 0.14 51 E13_Ab KnownBoundary 0 5.93 0.00 2.96 0.00 0.00 0.00 0.00 3.12 0.00 0.00 0.00 13.65 12.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.10 52 ER13b ExonRegion 0 37.70 1.09 17.79 3.01 25.66 5.27 5.28 20.63 16.75 5.81 0.00 223.58 65.12 0.00 0.00 0.00 71.82 0.80 0.00 0.11 13.83 40.33 21.98 53 E13a_E14b KnownJunction 0 30.15 0.00 13.33 5.26 39.98 0.00 9.80 15.73 21.82 8.00 0.00 271.74 68.83 0.00 0.00 0.00 55.73 0.00 0.00 0.00 16.74 28.29 20.91 54 ER14a ExonRegion 0 3.55 0.00 0.08 0.03 0.47 0.00 0.04 0.11 1.87 1.13 0.00 7.37 4.31 0.00 0.00 0.00 0.33 0.00 0.00 0.01 0.11 0.16 0.15 55 E14_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 3.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER14b ExonRegion 0 38.01 2.28 12.04 4.65 14.89 8.37 5.05 13.69 21.66 7.34 0.00 206.52 55.06 0.00 0.00 0.00 62.98 2.19 0.00 1.36 19.76 31.81 26.96 57 E14a_E15a KnownJunction 0 38.67 3.03 11.59 6.03 7.64 5.17 12.45 3.37 14.24 12.57 0.00 284.94 59.90 0.00 0.00 0.00 64.52 0.00 0.00 0.00 24.59 43.41 24.58 58 ER15a ExonRegion 0 36.53 2.84 17.67 2.57 8.82 9.67 8.35 10.33 19.70 8.44 0.00 275.91 64.73 0.00 0.00 0.00 58.97 0.18 0.00 1.34 21.00 34.80 26.90 59 E15_Ab KnownBoundary 1 48.01 12.30 26.29 1.56 26.74 2.16 3.49 18.36 20.37 3.41 0.00 355.02 46.43 0.00 0.00 0.00 55.73 1.58 0.00 0.00 28.54 25.41 30.22 60 ER15b ExonRegion 1 23.57 6.65 23.05 0.55 24.95 2.58 6.98 14.95 17.49 7.50 0.00 294.99 42.21 0.00 0.00 0.00 60.67 1.85 0.00 0.00 31.51 26.47 31.27 61 E15_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 E15a_E16a KnownJunction 0 19.26 0.00 22.12 0.00 36.50 2.27 10.64 16.43 13.83 11.85 0.00 248.18 101.29 0.00 0.00 0.00 50.49 1.53 0.00 0.00 34.35 28.11 31.33 63 ER15c ExonRegion 0 0.32 0.00 0.54 0.00 0.40 0.00 0.20 0.00 0.55 0.00 0.00 5.01 2.72 0.00 0.00 0.00 1.01 0.00 0.00 0.00 0.00 0.00 0.00 64 ER16a ExonRegion 0 33.92 0.40 13.62 1.78 30.81 8.23 11.62 11.12 14.64 8.96 0.00 246.21 70.17 0.00 0.00 0.00 54.03 0.75 0.00 3.08 26.01 33.14 19.05 65 E16a_E17b KnownJunction 0 30.01 0.00 14.34 3.83 36.08 16.01 13.78 6.16 22.28 7.49 0.00 181.41 33.11 0.00 0.00 0.00 23.84 2.32 0.00 6.52 10.56 19.84 3.59 66 ER17a ExonRegion 0 1.23 0.08 0.46 0.11 1.11 0.46 0.33 0.36 0.87 0.24 0.00 9.38 1.17 0.00 0.00 0.00 1.38 0.08 0.00 0.18 0.73 1.04 0.24 67 ER17b ExonRegion 1 38.36 2.54 14.09 2.41 26.14 10.43 6.15 12.68 22.10 6.16 0.00 272.40 44.95 0.00 0.00 0.00 45.32 2.73 0.00 2.35 18.87 28.34 16.95 68 E17_Da KnownBoundary 1 60.75 3.29 18.04 3.20 18.93 17.89 12.54 19.88 21.50 6.18 0.00 346.31 61.20 0.00 0.00 0.00 57.04 2.24 0.00 2.75 20.32 33.92 31.67 69 ER17c ExonRegion 1 40.67 2.10 16.82 4.62 18.73 5.10 10.23 22.30 19.32 8.02 0.00 279.11 40.83 0.00 0.00 0.00 54.29 1.35 0.00 2.31 26.16 38.43 18.77 70 E17_Db KnownBoundary 0 7.11 0.00 0.00 1.56 0.00 0.00 0.00 2.01 1.79 1.32 0.00 5.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.41 71 E17b_E18a KnownJunction 0 59.20 6.51 27.32 4.93 3.65 0.00 16.74 20.21 21.18 13.73 0.00 209.77 46.91 0.00 0.00 0.00 40.67 1.78 0.00 2.94 8.40 10.90 11.01 72 ER17d ExonRegion 0 5.91 2.91 0.00 0.58 2.73 1.31 4.74 0.59 0.27 0.57 1.77 7.23 8.63 4.92 9.47 3.04 3.71 1.22 1.30 4.35 3.83 1.92 5.05 73 E17_Dc NovelBoundary 0 9.71 2.76 0.00 1.37 0.00 12.32 1.94 0.00 1.56 0.00 0.00 16.36 13.47 15.42 9.64 19.82 9.16 7.01 3.86 5.56 2.72 5.51 7.51 74 E18_Aa NovelBoundary 0 19.86 0.00 0.00 0.00 0.00 0.00 1.94 5.09 1.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 ER18a ExonRegion 0 93.84 4.48 19.92 9.40 22.79 9.00 10.50 24.79 21.98 10.67 0.00 354.51 126.05 0.00 0.34 0.49 42.89 0.84 0.00 2.10 8.31 56.13 18.33 76 E18_Da KnownBoundary 0 26.38 3.35 8.49 1.76 3.99 6.98 0.00 3.57 4.11 7.20 0.00 289.29 105.51 0.00 0.00 0.00 39.08 0.00 0.00 2.49 2.84 55.05 22.54 77 ER18b ExonRegion 0 57.80 1.97 15.08 3.31 18.41 5.22 5.38 20.23 12.25 6.05 0.00 216.68 102.15 0.17 0.24 0.18 37.82 0.00 0.00 0.48 12.90 31.44 13.36 78 E18_Db KnownBoundary 0 40.38 0.00 1.69 0.00 30.31 0.00 0.00 1.77 0.00 0.00 0.00 49.37 33.44 0.00 0.00 0.00 4.77 0.00 0.00 0.00 6.05 2.94 3.33 79 ER18c ExonRegion 0 17.86 0.00 0.32 0.00 4.68 0.91 1.97 0.23 0.00 0.00 0.00 16.81 12.89 0.00 0.00 0.00 3.97 0.00 0.00 0.00 1.11 0.34 1.23