Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	MYNN	Gene	0	65.58	113.33	51.22	71.21	87.54	64.42	70.57	45.60	48.29	77.45	80.64	145.82	92.39	73.40	53.76	82.12	72.81	51.54	35.29	84.56	37.18	71.95	42.00
2	392733	Transcript	0	0.00	0.00	0.49	0.00	0.00	0.00	0.00	0.00	0.00	0.17	0.00	0.00	0.00	0.00	0.29	0.00	0.00	1.39	0.00	0.00	0.00	0.42	0.00
3	356716	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	349841	Transcript	0	145.57	139.14	101.49	122.25	165.39	83.67	106.52	52.86	57.83	89.91	97.51	191.13	81.53	93.39	77.57	72.06	97.88	44.60	51.72	93.05	27.73	98.21	49.45
5	IG15_AR3	ActiveIntergenicRegion	0	2.15	3.84	6.09	3.24	5.44	3.19	5.09	4.67	6.54	6.20	11.36	8.26	0.76	8.82	2.07	12.51	12.93	12.32	14.33	13.57	7.03	7.56	7.88
6	ER1a	ExonRegion	0	15.20	26.30	6.64	7.95	15.36	28.53	29.87	9.77	12.27	16.92	22.52	2.26	2.17	27.25	13.89	30.39	21.37	31.87	15.91	32.97	24.51	17.34	17.75
7	E1a_E2a	KnownJunction	1	78.83	123.53	15.46	57.80	88.37	158.66	193.65	57.96	43.75	45.40	68.07	0.00	6.82	58.92	16.07	126.63	59.28	102.27	54.50	96.77	74.81	125.47	126.76
8	ER2a	ExonRegion	0	20.29	62.37	25.53	44.03	61.01	83.98	76.48	42.71	50.00	68.18	98.29	125.57	66.91	78.25	40.66	92.35	101.34	62.68	35.38	101.60	54.28	69.04	55.89
9	E2_Da	NovelBoundary	0	0.00	16.90	8.19	17.35	3.14	10.05	13.82	1.60	15.39	12.03	10.32	6.30	6.82	9.59	8.90	0.00	17.20	0.00	0.00	8.63	0.00	0.00	0.00
10	E2a_E3a	KnownJunction	0	17.48	145.24	21.97	40.92	57.89	68.43	96.14	19.26	44.04	64.68	73.91	142.10	127.91	50.15	33.25	51.52	77.89	17.58	4.80	60.85	27.12	57.19	19.46
11	I2	Intron	0	8.16	11.08	7.94	17.80	10.48	7.89	11.77	8.04	13.91	13.21	5.91	18.22	17.08	6.95	4.40	7.55	8.39	4.44	6.17	11.32	3.65	6.86	4.05
12	I2_SR1	SilentIntronRegion	0	7.72	6.37	5.71	21.31	7.26	5.54	5.89	7.48	19.00	15.91	3.24	15.42	18.71	10.21	4.51	10.40	6.62	5.91	5.24	11.19	2.56	9.33	2.06
13	I2_AR2	ActiveIntronRegion	0	3.13	0.53	9.91	13.39	1.92	8.49	6.50	10.37	4.94	11.84	5.55	3.76	15.80	11.09	5.36	13.83	10.33	6.03	6.37	11.61	12.65	3.99	6.06
14	I2_AR3	ActiveIntronRegion	0	13.52	10.32	17.16	28.88	5.31	16.68	13.62	8.67	20.03	18.76	5.91	22.17	24.01	12.01	6.33	10.52	14.30	6.72	13.41	14.58	5.01	8.45	7.62
15	I2_AR4	ActiveIntronRegion	0	0.35	12.54	13.48	7.72	17.39	7.34	13.68	8.64	3.71	6.12	1.93	28.14	17.20	3.25	0.00	0.50	6.60	5.54	3.19	6.38	4.41	1.39	0.00
16	E3_Aa	NovelBoundary	0	34.15	20.13	1.83	19.78	12.39	11.36	27.78	9.94	18.20	29.63	11.53	6.30	27.27	8.48	0.00	7.60	13.00	1.99	8.56	28.25	8.22	8.63	6.74
17	ER3a	ExonRegion	0	73.01	132.95	58.32	88.50	102.12	87.39	96.14	59.50	68.27	99.46	122.50	232.97	186.87	116.01	69.18	123.99	112.49	86.13	45.06	109.93	61.97	92.95	65.44
18	E3_Da	NovelBoundary	0	54.75	51.64	23.77	49.38	16.89	21.41	53.00	18.24	16.84	51.39	27.22	60.92	5.84	39.97	22.75	28.28	31.14	31.26	11.77	42.38	18.29	27.37	19.72
19	E3a_E4a	KnownJunction	0	168.77	102.68	78.80	96.59	159.25	74.84	118.49	50.03	52.55	110.00	125.03	175.11	79.86	111.60	116.69	146.71	103.13	93.56	62.78	97.86	64.56	84.26	64.79
20	I3_AR1	ActiveIntronRegion	0	5.04	11.99	8.50	19.74	2.21	9.11	12.60	6.93	11.42	10.78	1.20	6.72	2.77	1.31	0.85	0.92	1.37	3.05	7.57	15.16	1.14	1.29	1.52
21	ER4a	ExonRegion	0	113.10	152.90	72.20	113.68	132.90	94.26	104.68	57.58	60.54	111.95	130.78	223.48	78.53	108.86	82.89	139.39	98.00	99.09	59.37	123.23	58.98	98.26	72.33
22	E4a_E5a	KnownJunction	0	83.64	221.21	56.03	87.60	122.84	101.08	126.44	53.07	59.84	102.83	111.61	212.32	96.26	106.07	130.42	71.26	105.66	66.16	36.42	106.10	55.78	80.46	73.58
23	ER5a	ExonRegion	0	75.80	173.89	71.89	95.84	109.21	72.69	82.49	45.06	52.92	88.00	109.32	225.83	76.48	103.99	83.62	112.04	103.64	67.54	57.32	112.93	48.70	82.26	59.01
24	E5_Da	NovelBoundary	1	16.52	5.79	5.68	11.45	54.92	19.65	15.02	0.00	16.35	12.38	17.95	58.97	20.78	55.62	0.00	3.42	13.84	1.91	3.76	29.02	6.24	11.45	0.00
25	E5a_E6a	KnownJunction	0	81.79	164.44	80.28	116.54	145.08	53.15	109.39	46.95	47.11	90.85	83.86	137.59	62.01	55.62	58.10	51.78	70.78	36.60	14.21	74.91	15.51	47.03	3.76
26	E5a_E8a	NovelJunction	0	0.00	9.01	14.64	5.06	10.87	11.13	2.03	6.45	11.02	16.98	9.21	6.30	6.82	14.36	17.43	3.50	19.73	7.71	4.80	3.26	11.06	15.49	7.68
27	I5	Intron	0	6.61	9.71	4.25	11.19	13.76	13.36	15.08	6.15	11.27	14.96	4.97	21.36	20.78	9.37	4.67	7.10	7.48	1.30	2.73	16.68	1.08	15.56	5.57
28	I5_SR1	SilentIntronRegion	0	5.77	7.38	3.96	11.25	14.02	15.17	15.55	5.51	10.54	16.80	6.37	18.85	21.14	11.75	5.18	8.03	10.62	0.72	1.99	15.95	1.72	14.23	3.99
29	I5_AR1	ActiveIntronRegion	0	7.69	12.66	4.64	11.19	13.55	11.22	14.62	6.98	12.25	12.83	3.29	24.63	20.50	6.52	4.08	6.01	3.67	2.02	3.66	17.70	0.30	17.33	7.57
30	E6_Aa	NovelBoundary	1	10.52	5.85	8.81	9.66	3.48	10.96	15.10	2.55	10.82	9.75	7.79	73.22	13.64	7.65	10.14	0.00	12.62	2.53	4.42	9.08	0.00	11.63	3.50
31	ER6a	ExonRegion	0	104.72	190.53	74.70	102.01	151.53	82.56	91.86	47.68	55.83	86.81	95.03	179.36	84.25	82.33	92.63	96.63	89.99	41.29	44.33	93.90	34.50	88.70	58.91
32	E6_Da	NovelBoundary	0	17.48	30.85	8.40	7.13	38.54	13.63	4.20	5.50	12.01	3.84	12.63	36.31	29.71	11.77	4.45	7.18	17.95	0.00	3.76	30.10	2.41	29.27	8.02
33	E6a_E8a	KnownJunction	1	122.61	143.66	105.88	153.29	127.08	109.48	116.06	35.69	61.40	81.18	74.44	171.66	47.07	67.16	80.97	67.42	77.05	43.57	76.24	76.83	23.23	92.34	65.90
34	E6a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	I6	Intron	0	20.33	21.55	1.81	5.38	12.41	6.68	15.78	1.71	4.26	6.23	4.48	11.81	6.94	8.13	2.03	3.94	4.37	1.22	4.22	11.98	2.92	11.04	2.92
36	I6_AR1	ActiveIntronRegion	0	19.89	22.39	2.77	5.49	11.55	7.95	19.15	2.58	6.16	8.03	3.60	10.16	7.71	6.88	2.18	4.68	4.90	1.02	1.96	14.75	3.62	10.34	2.82
37	I6_SR1	SilentIntronRegion	0	32.85	29.30	0.00	6.92	23.49	5.84	15.50	0.00	1.24	4.80	8.02	17.48	8.16	14.14	3.44	2.97	4.03	1.92	10.74	10.24	2.20	16.36	4.35
38	ER7a	ExonRegion	0	0.00	0.00	0.49	0.00	0.00	0.00	0.00	0.00	0.00	0.17	0.00	0.00	0.00	0.00	0.29	0.00	0.00	1.39	0.00	0.00	0.00	0.42	0.00
39	I7	Intron	0	14.57	22.56	4.88	8.96	20.57	7.97	13.45	10.67	8.98	10.62	8.27	25.23	15.82	8.84	6.70	6.95	4.19	2.16	3.19	12.81	0.44	16.15	4.51
40	I7_AR1	ActiveIntronRegion	0	14.61	22.62	4.90	8.98	20.62	7.99	13.49	10.70	9.00	10.65	8.29	25.30	15.86	8.86	6.71	6.97	4.20	2.16	3.20	12.84	0.44	16.19	4.53
41	E8_Aa	NovelBoundary	0	29.12	30.92	32.35	12.99	32.51	5.22	7.77	16.39	12.79	18.43	0.00	37.66	33.93	10.18	14.09	8.63	4.49	4.31	4.80	26.65	5.62	35.15	0.00
42	ER8a	ExonRegion	0	166.23	138.19	99.24	127.53	176.29	97.13	111.64	59.66	58.92	96.00	100.53	229.16	79.51	96.89	96.98	95.35	80.36	48.87	42.69	91.42	25.56	108.77	46.85
43	E8_Da	NovelBoundary	0	14.60	12.76	27.44	11.09	41.00	13.17	12.59	4.23	8.74	6.90	2.32	0.00	6.82	2.35	6.30	0.00	4.77	0.00	0.00	26.40	6.24	2.27	0.00
44	E8a_E9a	KnownJunction	1	147.88	135.57	99.35	85.94	192.78	44.41	91.86	63.21	53.18	92.57	117.56	172.56	118.01	116.13	54.76	53.40	136.23	41.37	36.24	110.90	34.41	93.50	35.60
45	I8_AR2	ActiveIntronRegion	0	13.87	5.88	10.89	8.78	12.20	5.69	13.30	6.48	8.71	8.76	7.35	15.49	9.67	4.86	4.66	5.49	9.97	6.56	5.76	18.31	1.91	9.70	4.44
46	E9_Aa	NovelBoundary	0	13.93	3.22	16.59	6.83	12.48	0.00	10.07	2.26	11.02	5.00	9.95	11.10	6.33	0.00	8.90	8.37	0.00	6.30	12.80	9.59	2.66	2.57	8.28
47	ER9a	ExonRegion	0	72.15	122.76	57.90	73.21	89.79	47.51	55.17	47.16	43.50	78.42	54.24	110.48	72.18	47.40	46.28	54.74	46.53	23.81	27.70	70.74	16.57	69.01	22.54
48	IG16	Intergenic	0	9.61	26.74	10.36	23.91	17.98	13.89	16.63	11.92	13.14	16.98	5.87	21.96	12.08	8.06	6.30	7.32	5.81	8.28	7.19	30.82	1.88	13.97	5.17
49	IG16_AR1	ActiveIntergenicRegion	0	15.12	62.09	15.14	32.31	35.76	24.45	28.03	18.75	20.86	33.23	9.38	45.88	27.52	18.08	13.06	20.57	10.58	7.30	12.83	37.46	0.62	32.19	10.98
50	IG16_AR2	ActiveIntergenicRegion	0	9.20	54.14	20.20	49.77	57.21	35.54	24.42	28.43	27.51	33.89	17.26	38.37	20.22	20.22	22.41	14.86	21.29	14.14	3.73	43.95	0.00	36.07	15.29
51	IG16_AR3	ActiveIntergenicRegion	0	21.48	41.61	18.81	38.98	35.67	21.00	28.37	21.26	20.70	28.75	17.13	42.01	25.44	17.15	13.10	15.82	13.95	10.95	6.70	38.38	2.53	29.41	11.46
52	IG16_SR1	SilentIntergenicRegion	0	15.24	57.47	15.22	37.89	29.19	21.75	28.05	21.64	19.09	31.65	11.39	36.72	18.74	14.62	13.80	9.07	9.49	5.32	6.73	47.13	2.28	26.25	7.91
53	IG16_AR4	ActiveIntergenicRegion	0	10.55	48.26	15.74	28.29	16.82	9.91	14.22	14.22	14.31	20.76	3.56	24.38	11.97	7.79	8.18	4.27	2.79	5.14	5.83	35.64	0.44	19.43	3.23
54	IG16_AR6	ActiveIntergenicRegion	0	4.42	15.47	3.68	14.99	14.89	18.42	15.25	3.46	6.18	9.18	0.00	2.45	10.40	7.91	6.18	8.40	2.01	9.24	9.28	9.07	1.15	2.08	2.94
55	IG16_AR7	ActiveIntergenicRegion	0	3.53	12.20	3.68	12.63	4.99	8.86	6.49	2.30	3.95	8.03	0.00	8.66	13.91	4.28	10.73	2.08	0.00	5.17	14.87	12.48	0.00	4.17	2.06
56	IG16_SR2	SilentIntergenicRegion	0	6.75	9.10	8.58	18.00	13.19	12.02	6.75	8.21	9.61	13.75	3.85	11.67	4.80	7.98	4.42	6.90	5.78	4.16	0.62	29.92	0.00	6.41	2.98
57	IG16_AR9	ActiveIntergenicRegion	0	2.97	9.53	4.58	14.33	10.62	6.92	12.07	6.39	6.90	8.89	2.14	19.07	12.04	2.52	0.84	3.53	7.60	5.45	5.87	26.28	0.38	3.82	2.32
58	IG16_SR3	SilentIntergenicRegion	0	4.74	8.84	4.37	13.89	9.36	11.05	11.50	5.57	9.69	8.70	2.77	8.65	5.34	3.80	1.82	5.12	2.74	11.11	9.01	26.36	2.99	3.94	3.72
59	IG16_AR10	ActiveIntergenicRegion	0	7.01	5.30	8.81	26.04	10.84	15.72	15.65	12.94	10.51	10.51	0.72	19.78	2.82	3.18	2.54	0.55	1.84	5.99	4.67	17.53	2.05	8.78	1.60