Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 USP13 Gene 0 21.59 47.70 30.91 28.85 50.54 35.96 67.00 28.69 41.75 54.03 93.18 65.24 42.14 60.70 32.52 45.56 54.37 70.60 33.72 60.15 30.97 47.06 34.92 2 263966 Transcript 0 14.71 31.32 19.89 18.73 33.68 22.80 40.93 19.19 25.82 34.69 39.58 31.00 17.79 23.23 16.79 18.31 21.67 35.29 17.85 29.53 13.00 25.53 18.21 3 482333 Transcript 0 0.63 0.00 0.53 0.62 1.16 3.25 3.18 0.70 0.58 0.00 2.87 1.87 1.67 0.00 3.42 1.91 7.20 2.55 0.59 8.93 0.86 1.59 2.14 4 491391 Transcript 0 0.00 0.00 0.00 0.00 0.00 9.88 0.00 0.00 1.56 1.56 7.05 0.00 0.00 0.00 0.00 4.10 0.00 0.00 0.00 3.26 3.15 0.00 4.35 5 497380 Transcript 0 0.00 0.00 3.67 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00 7.59 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 6 496897 Transcript 0 0.00 0.04 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.18 1.80 0.00 1.45 1.84 1.35 0.94 0.00 0.00 0.00 7 497155 Transcript 0 0.00 2.83 9.79 0.00 8.15 0.00 12.85 0.00 0.00 1.67 4.90 12.30 0.00 2.12 0.00 0.00 0.00 8.62 0.00 2.75 2.72 0.00 3.50 8 ER1a ExonRegion 0 0.36 0.00 0.00 0.00 0.00 0.00 0.60 0.44 0.63 1.77 6.66 0.00 0.00 0.46 0.84 1.54 2.84 6.22 0.55 0.57 3.05 0.00 3.04 9 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.97 0.00 3.07 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.82 0.00 0.00 0.60 2.85 0.00 2.41 1.71 2.27 0.92 1.34 2.95 2.93 0.66 2.20 0.00 2.02 11 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 0.00 1.67 9.11 0.00 12.34 0.00 0.00 4.36 8.23 5.97 4.80 0.00 5.87 0.00 0.00 12 ER1c ExonRegion 0 0.00 2.00 0.93 0.00 0.83 0.79 2.58 2.02 0.96 3.12 20.80 4.23 1.54 13.89 6.09 5.55 6.56 9.75 2.65 9.78 8.09 3.56 4.44 13 E1_Ad KnownBoundary 0 0.00 6.05 1.48 0.00 12.39 2.90 20.05 12.16 9.72 7.41 68.18 12.00 6.66 35.32 4.45 26.06 17.02 38.14 12.71 42.89 23.72 5.45 35.43 14 ER1d ExonRegion 0 3.32 4.82 6.86 0.22 2.23 3.34 15.13 14.26 12.10 12.92 62.14 22.47 10.96 51.77 16.67 31.00 31.97 52.18 10.93 39.35 19.95 8.77 17.50 15 E1a_E3a KnownJunction 1 6.96 6.05 17.24 1.33 3.99 5.22 21.68 19.22 9.37 16.57 91.08 60.32 6.82 81.64 33.99 50.16 50.77 50.74 17.69 69.99 20.08 20.15 19.29 16 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 9.88 0.00 0.00 1.56 1.56 7.05 0.00 0.00 0.00 0.00 4.10 0.00 0.00 0.00 3.26 3.15 0.00 4.35 17 E1a_E6a NovelJunction 0 0.00 0.00 1.71 2.06 0.00 0.00 0.00 0.00 0.00 0.00 9.84 0.00 0.00 2.12 0.00 0.00 4.49 2.57 0.00 6.39 0.00 0.00 0.00 18 E2_Aa NovelBoundary 1 0.00 3.09 22.56 1.80 0.00 0.00 4.33 3.94 5.38 9.46 0.00 0.00 0.00 2.77 29.79 7.86 4.77 22.72 8.47 11.63 0.00 9.06 4.27 19 ER2a ExonRegion 0 0.00 0.07 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.35 3.60 0.00 2.90 1.12 2.69 1.87 0.00 0.00 0.00 20 E2_Da NovelBoundary 0 3.78 2.96 14.07 0.00 8.23 0.00 12.90 0.00 4.43 1.45 0.00 0.00 0.00 0.00 0.00 4.36 9.16 16.37 4.80 6.39 0.00 0.00 0.00 21 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 22 ER3a ExonRegion 0 4.01 14.59 10.02 12.15 17.75 16.01 32.63 21.30 27.78 29.97 157.72 74.25 48.65 89.44 28.02 58.24 88.13 63.59 32.21 68.07 34.94 37.67 22.86 23 E3_Da NovelBoundary 0 0.00 3.35 2.25 3.80 11.80 0.00 28.71 4.81 6.16 5.53 0.00 0.00 0.00 2.88 9.39 7.26 7.85 7.83 4.33 11.38 2.41 0.00 4.18 24 E3a_E4a KnownJunction 1 3.78 21.31 9.25 10.09 31.24 20.27 63.99 24.15 24.88 31.56 141.46 102.03 73.53 58.45 10.75 39.65 69.10 64.29 33.79 59.00 31.32 30.62 20.23 25 E3a_E5a KnownJunction 0 0.00 0.00 3.67 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 0.00 7.59 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 26 I3_AR1 ActiveIntronRegion 0 27.82 16.26 9.08 15.21 7.47 4.46 15.23 5.85 10.39 11.22 2.37 5.12 1.23 1.16 7.55 10.60 6.31 14.37 5.19 12.90 0.65 0.93 4.98 27 ER4a ExonRegion 0 3.16 10.73 13.48 9.38 26.49 16.11 37.61 20.46 36.26 39.45 143.86 100.07 98.26 82.59 37.48 57.01 81.60 70.00 28.62 67.84 24.96 33.17 30.23 28 E4a_E5a KnownJunction 0 3.78 19.60 19.63 19.84 11.71 12.49 37.01 15.32 57.46 59.20 165.41 199.11 84.57 116.02 70.96 108.69 106.12 72.63 22.12 72.74 34.10 41.09 37.73 29 ER5a ExonRegion 0 1.32 17.27 16.45 15.76 16.01 25.42 46.64 15.77 36.56 56.00 188.33 186.98 98.76 128.73 41.76 95.13 117.99 88.27 43.05 83.36 33.96 78.97 40.32 30 E5a_E6a KnownJunction 0 9.93 12.37 8.63 9.36 27.25 21.07 40.85 8.54 22.77 65.73 123.66 127.09 54.38 82.70 27.32 62.80 81.53 99.16 32.38 49.98 13.59 62.03 31.76 31 ER6a ExonRegion 0 3.66 18.60 15.48 18.59 42.62 26.12 64.06 17.15 41.24 52.22 182.21 149.02 114.56 116.43 32.89 84.67 132.01 104.11 57.11 82.86 51.06 67.21 40.64 32 E6a_E7a KnownJunction 0 6.96 29.40 10.70 11.89 29.63 51.16 62.49 13.60 42.53 41.34 132.82 69.62 76.62 123.32 29.92 81.94 123.89 148.11 43.01 72.80 46.95 68.77 52.67 33 ER7a ExonRegion 0 11.35 17.93 13.81 17.47 20.55 31.34 50.37 9.11 35.03 36.65 143.12 103.51 52.87 120.41 36.53 76.06 115.98 147.82 42.42 68.38 54.69 67.43 54.33 34 ER7b ExonRegion 0 6.84 16.48 18.52 18.38 16.71 28.46 44.51 10.41 29.73 34.29 136.39 62.45 47.91 102.28 27.98 71.13 99.13 112.02 36.64 64.90 64.14 40.02 36.05 35 E7b_E8a KnownJunction 1 6.22 12.23 15.70 17.31 46.01 44.07 78.74 13.60 36.43 44.83 152.88 31.81 48.37 93.24 41.16 81.18 92.94 129.54 39.81 43.34 60.91 55.60 65.39 36 ER8a ExonRegion 1 9.74 20.64 18.03 17.32 31.09 34.34 58.31 12.72 34.34 37.00 162.18 47.08 45.27 132.48 26.78 73.27 89.82 142.30 45.57 77.56 66.60 38.27 61.89 37 E8a_E9a KnownJunction 0 20.08 20.33 16.85 11.85 35.99 39.81 40.45 18.44 36.08 39.38 122.19 25.21 80.03 83.53 40.05 53.23 79.20 126.06 56.66 65.00 47.32 63.68 91.25 38 ER9a ExonRegion 0 5.58 16.01 21.12 12.86 14.00 23.24 35.80 14.73 34.40 38.99 151.02 61.06 49.37 98.35 34.03 76.05 84.20 119.81 36.58 70.33 59.95 39.32 56.37 39 E9a_E10a KnownJunction 0 10.74 30.59 19.40 24.11 40.49 21.24 39.61 23.17 35.13 44.38 178.62 68.57 43.34 98.65 56.49 85.53 125.01 188.99 74.92 69.22 57.76 70.30 57.96 40 ER9b ExonRegion 1 8.30 18.55 14.56 21.10 19.69 18.63 38.29 18.94 31.42 42.62 156.56 79.66 24.95 105.89 41.20 73.23 107.21 160.98 49.31 62.98 59.15 56.76 61.20 41 ER10a ExonRegion 1 14.20 23.53 26.09 17.81 29.28 31.20 59.89 22.11 28.73 42.91 219.65 65.78 68.14 123.57 41.71 102.62 136.16 146.02 67.42 87.17 86.34 55.27 60.94 42 E10a_E11a KnownJunction 1 16.89 25.46 16.88 14.08 30.39 27.60 84.13 12.08 17.94 40.99 188.68 63.17 66.39 109.13 18.67 78.27 73.87 84.23 17.51 78.43 70.55 48.56 43.45 43 ER11a ExonRegion 1 8.31 32.58 11.02 19.37 23.00 18.49 61.83 11.64 24.18 39.68 144.39 90.83 74.69 107.02 24.78 59.89 83.79 98.13 35.82 61.00 51.39 49.14 47.08 44 E11a_E12a KnownJunction 0 0.00 35.26 12.65 22.31 15.45 14.59 38.02 8.13 22.97 53.94 144.72 75.92 45.78 92.24 27.94 44.09 108.56 85.15 60.90 69.48 64.06 69.74 31.33 45 ER12a ExonRegion 0 8.23 24.94 13.90 18.67 24.42 21.87 43.35 20.19 29.60 41.90 156.81 78.58 63.17 100.67 30.35 81.21 97.51 109.57 31.68 83.57 66.99 56.29 48.80 46 E12a_E13a KnownJunction 0 20.08 38.87 21.41 21.68 53.23 14.03 66.51 27.68 29.98 40.16 153.30 90.48 141.06 130.91 32.26 110.65 76.20 123.86 56.19 102.08 64.56 61.54 44.64 47 ER13a ExonRegion 0 10.35 40.49 18.59 20.42 30.70 28.47 69.44 18.32 39.64 47.46 157.82 62.47 59.14 95.77 37.98 77.14 106.83 103.87 43.19 94.67 66.90 46.43 50.65 48 E13a_E14a KnownJunction 0 18.37 44.99 20.40 18.08 11.63 27.48 34.93 15.81 30.18 50.12 149.83 43.06 27.60 76.05 62.30 45.37 87.89 110.56 15.06 75.87 85.75 23.15 42.51 49 ER14a ExonRegion 0 9.87 58.11 26.26 24.59 25.10 20.93 58.96 16.88 34.06 58.21 173.76 84.49 94.97 98.33 38.36 75.22 122.04 115.84 59.96 121.24 89.15 51.63 60.29 50 E14_Da KnownBoundary 1 15.56 56.77 23.09 27.77 30.14 19.59 50.04 23.99 48.15 53.11 155.25 80.73 157.29 114.19 28.80 127.74 104.63 122.78 57.98 139.98 78.70 65.76 59.16 51 E14a_E16b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.11 0.00 0.00 0.00 0.00 0.00 0.00 52 ER14b ExonRegion 0 12.92 22.96 11.13 24.54 36.29 29.26 51.31 16.35 39.48 55.92 201.49 88.37 76.18 104.44 41.97 89.47 95.60 131.95 43.23 92.19 77.64 53.45 45.12 53 E14b_E15a KnownJunction 1 10.37 48.22 8.28 22.34 40.58 70.47 71.54 15.36 38.60 51.41 186.68 110.59 31.65 93.24 67.50 95.62 85.55 115.24 62.59 104.82 52.08 45.37 46.69 54 E15_Aa NovelBoundary 0 0.00 5.39 1.83 5.46 0.00 5.79 9.67 0.00 4.83 1.13 2.47 0.00 0.00 0.00 0.00 4.02 4.77 8.25 0.00 12.08 0.00 2.94 20.91 55 ER15a ExonRegion 0 7.66 25.66 12.90 16.63 26.19 43.04 75.79 19.44 34.64 39.12 174.63 123.32 72.77 101.85 43.58 73.43 90.27 104.84 40.84 89.27 51.35 60.45 51.21 56 E15a_E16a KnownJunction 0 6.67 42.49 10.26 14.68 24.11 30.38 99.81 13.43 40.16 35.48 187.36 133.69 144.47 95.00 55.88 91.43 74.52 106.62 34.54 77.92 47.75 59.52 65.47 57 E16_Ab NovelBoundary 0 16.74 20.26 4.38 15.88 7.39 28.17 52.29 7.64 28.99 19.58 126.08 106.98 38.96 78.52 27.44 90.49 69.47 95.47 39.34 49.47 16.12 23.94 53.69 58 ER16a ExonRegion 0 9.24 20.15 8.52 11.77 13.01 28.76 81.36 12.88 37.45 31.49 172.91 127.13 92.95 94.64 39.56 97.54 73.37 117.42 35.91 74.66 39.07 47.45 65.14 59 ER16b ExonRegion 0 11.19 32.54 11.65 12.24 19.05 17.67 53.31 9.99 34.05 35.02 132.64 84.66 64.27 110.47 42.43 74.92 80.59 90.78 32.36 57.59 60.72 45.67 45.13 60 E16a_E17a KnownJunction 0 14.08 25.13 9.67 7.39 20.20 16.58 22.66 3.20 14.06 11.50 45.49 38.26 22.89 98.24 30.41 54.69 37.96 48.17 16.75 35.54 43.12 29.76 60.86 61 E16a_E18a KnownJunction 0 0.00 2.83 9.79 0.00 8.15 0.00 12.85 0.00 0.00 1.67 4.90 12.30 0.00 2.12 0.00 0.00 0.00 8.62 0.00 2.75 2.72 0.00 3.50 62 E17_Aa NovelBoundary 0 11.34 0.00 5.12 7.99 4.24 2.90 41.03 4.72 1.50 4.27 2.37 0.00 0.00 0.00 0.00 7.52 0.00 21.02 12.71 15.47 0.00 6.18 0.00 63 E17a_E18a KnownJunction 1 7.33 39.93 10.41 5.16 44.23 23.91 34.49 11.75 15.13 28.15 114.71 94.08 13.64 137.80 12.24 52.38 98.36 37.60 12.61 48.58 14.21 39.07 26.29 64 ER17a ExonRegion 1 12.23 35.63 12.53 8.23 34.09 31.45 34.08 10.37 18.94 26.00 103.88 74.40 19.63 125.18 24.93 66.16 100.74 61.45 20.29 72.02 40.56 40.13 53.29 65 ER17b ExonRegion 0 1.26 0.00 1.06 1.25 2.31 6.50 6.35 1.41 1.15 0.00 5.73 3.74 3.34 0.00 6.84 3.83 10.29 5.10 1.19 17.85 1.72 3.18 4.28 66 E17_Db NovelBoundary 0 10.30 21.77 3.49 8.26 20.37 8.46 49.29 2.55 4.89 10.99 5.37 0.00 0.00 11.42 5.19 23.58 3.55 14.55 0.00 8.56 5.81 3.12 8.02 67 E18_Aa NovelBoundary 0 10.45 6.25 4.67 11.15 4.33 8.06 10.42 2.46 6.68 2.90 2.68 0.00 6.82 2.47 5.69 7.78 0.00 4.97 0.00 11.31 0.00 3.00 8.19 68 ER18a ExonRegion 0 7.78 40.87 14.67 13.53 27.23 26.82 43.66 13.09 24.83 32.14 122.55 60.40 30.72 95.78 28.79 90.28 79.80 82.87 27.95 59.52 58.45 39.74 39.50 69 E18_Da KnownBoundary 0 11.04 40.85 18.36 20.68 22.75 32.71 52.29 13.06 36.14 32.29 99.50 50.27 69.64 75.64 35.11 107.24 57.04 117.11 63.81 82.13 83.83 48.80 45.58 70 ER18b ExonRegion 0 20.03 41.84 33.26 24.35 32.75 34.44 55.44 13.15 33.89 38.44 126.72 81.09 65.12 100.38 65.64 84.96 70.33 136.36 42.79 77.68 68.48 41.79 45.04 71 E18b_E19a KnownJunction 0 20.67 35.06 42.10 21.08 16.47 18.74 59.09 28.83 42.45 41.69 119.66 55.97 32.14 94.77 54.64 74.51 67.98 110.60 41.88 112.62 54.12 37.78 47.97 72 ER19a ExonRegion 0 28.76 56.76 44.95 32.82 42.99 18.52 58.75 23.53 44.10 43.71 133.84 42.44 34.60 96.29 58.63 75.50 82.58 92.81 44.42 80.34 47.89 46.54 43.22 73 E19a_E20a KnownJunction 1 31.26 100.71 54.32 37.79 68.42 58.60 92.61 30.81 60.59 50.82 152.83 12.15 38.63 97.42 97.53 77.50 73.96 106.74 41.60 104.63 46.15 46.05 45.67 74 ER20a ExonRegion 0 28.17 60.74 42.90 37.59 54.12 40.13 82.10 29.14 49.46 50.09 158.80 76.13 64.72 106.26 63.43 87.25 108.29 97.29 46.11 100.26 56.51 58.72 62.11 75 E20_Da NovelBoundary 0 3.78 0.00 8.63 1.83 0.00 0.00 2.08 0.00 7.18 4.97 5.16 0.00 0.00 2.12 21.51 14.36 3.46 9.87 0.00 2.68 3.03 0.00 4.18 76 E20a_E21a KnownJunction 0 36.08 77.82 33.12 40.65 62.14 23.28 61.56 26.33 51.56 54.61 190.47 117.19 49.35 88.47 20.27 130.99 126.88 113.42 39.91 134.61 81.30 60.25 33.80 77 ER21a ExonRegion 0 21.21 51.32 34.63 23.92 46.37 18.88 66.26 29.73 40.03 46.52 163.43 83.18 72.50 85.31 40.17 72.97 102.29 67.41 36.69 88.74 45.40 42.19 51.89 78 E21a_E22a KnownJunction 0 27.41 52.10 48.93 29.53 37.35 26.06 72.56 32.20 36.17 49.43 162.30 143.30 95.45 113.54 55.13 84.85 135.95 50.53 22.02 68.46 34.10 49.17 43.02 79 ER22a ExonRegion 0 26.82 46.89 32.68 26.37 60.45 38.80 80.63 26.12 36.72 44.99 122.88 112.43 68.81 88.32 40.20 64.23 62.88 57.93 28.51 61.16 24.43 68.33 38.95 80 E22_Da KnownBoundary 0 10.08 35.06 18.33 29.77 75.13 49.97 98.88 15.07 31.02 35.54 172.31 94.83 78.57 73.64 41.91 67.93 104.07 57.87 31.06 65.39 25.58 68.21 55.14 81 ER22b ExonRegion 0 29.05 62.64 39.77 37.46 67.37 45.59 81.26 37.93 51.01 67.61 72.50 62.00 35.58 45.99 32.74 35.09 40.50 64.36 35.15 58.50 22.96 51.05 33.39