Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PIK3R4 Gene 0 40.37 48.97 35.60 51.19 63.19 41.82 57.71 39.37 28.19 71.35 130.49 101.42 96.68 125.20 74.51 120.50 122.57 63.30 45.33 54.62 63.45 73.97 61.24 2 356763 Transcript 0 58.41 56.52 41.35 64.83 80.12 49.38 69.89 45.73 31.58 80.76 140.52 107.12 93.78 132.92 98.01 126.40 132.07 69.33 51.67 61.53 63.95 76.31 65.14 3 ER1a ExonRegion 1 3.37 11.18 7.60 7.20 10.94 16.57 19.30 9.27 9.07 20.10 72.01 15.83 19.87 71.95 12.22 65.73 63.85 39.48 20.75 23.48 55.30 30.47 38.68 4 E1a_E2a KnownJunction 1 10.74 31.31 18.30 14.58 12.39 0.00 11.48 13.02 11.37 29.41 105.34 49.37 59.09 104.36 4.45 79.72 60.31 72.75 9.60 13.93 57.14 47.27 41.83 5 ER2a ExonRegion 1 12.11 41.55 18.58 23.88 30.55 26.56 42.81 26.42 25.44 53.45 127.58 108.53 136.85 139.83 29.79 118.10 134.68 61.68 34.89 61.39 67.23 65.87 59.63 6 E2a_E3a KnownJunction 1 10.22 42.76 3.76 25.11 25.98 13.12 30.78 26.45 26.07 55.47 96.50 155.15 123.86 120.49 47.35 100.83 139.78 17.95 36.42 56.69 39.23 92.16 52.75 7 ER3a ExonRegion 0 19.89 35.72 12.41 26.71 38.40 26.11 48.13 27.69 24.62 62.99 140.06 166.75 146.48 116.37 36.27 79.27 155.39 24.93 25.10 56.59 30.46 77.67 52.90 8 E3a_E4a KnownJunction 1 51.64 26.31 8.60 32.90 56.62 30.38 57.81 27.97 34.03 57.03 125.87 272.34 176.94 79.17 47.47 86.56 213.93 20.77 23.62 51.84 44.23 64.36 53.78 9 ER4a ExonRegion 0 22.53 40.68 15.14 31.87 53.95 40.65 65.71 21.88 23.94 63.70 133.49 142.73 121.30 132.75 38.32 121.44 159.24 57.05 48.62 58.85 71.71 76.28 68.41 10 E4a_E5a KnownJunction 1 24.52 52.62 14.25 39.69 48.98 43.21 71.37 25.88 24.22 53.97 142.77 85.98 68.99 131.67 31.28 97.32 126.69 37.18 21.55 31.19 40.03 61.17 64.28 11 ER5a ExonRegion 0 33.05 44.72 13.18 42.94 69.01 49.96 72.53 32.87 36.61 65.83 158.94 106.22 152.13 135.61 58.07 147.64 144.24 44.83 43.89 53.73 43.50 78.79 57.23 12 E5a_E6a KnownJunction 0 37.64 63.02 4.67 47.48 55.43 30.15 77.06 44.52 39.24 76.15 145.04 139.85 129.86 74.87 76.02 83.82 170.92 30.26 34.45 49.47 45.22 58.60 49.34 13 ER6a ExonRegion 0 24.96 47.93 16.37 42.24 45.63 47.98 57.51 27.33 37.06 67.65 125.50 118.44 110.89 110.65 53.69 104.41 107.10 51.80 32.08 46.63 42.47 83.27 57.70 14 E6a_E7a KnownJunction 0 23.93 45.45 26.88 41.55 76.74 52.07 105.11 28.96 29.25 64.44 178.78 67.52 111.19 96.36 31.40 102.71 158.39 59.98 49.51 61.23 100.02 78.26 67.78 15 ER7a ExonRegion 0 23.96 54.01 39.61 46.23 75.01 55.69 58.58 33.55 28.88 76.57 162.32 137.30 137.28 168.75 66.76 163.69 151.59 89.12 58.47 70.47 98.05 94.27 88.45 16 E7a_E8a KnownJunction 1 21.41 16.05 27.67 29.27 49.15 26.80 44.43 35.57 31.48 66.70 135.30 100.23 100.16 147.33 45.99 73.57 186.16 41.33 39.81 79.64 73.89 76.91 32.69 17 ER8a ExonRegion 0 36.14 43.67 27.19 43.86 65.61 53.59 58.83 39.28 31.61 79.18 148.13 122.56 160.30 140.93 66.57 131.14 152.20 69.94 51.12 66.89 57.40 86.55 68.13 18 E8a_E9a KnownJunction 0 39.34 48.15 29.33 39.49 62.14 64.79 57.76 36.72 26.16 63.74 152.99 118.54 132.46 138.74 59.46 57.93 117.25 37.52 37.93 70.82 40.77 63.13 42.77 19 ER9a ExonRegion 0 24.73 40.90 25.63 42.40 70.61 43.28 61.44 33.20 27.25 63.30 153.51 131.75 133.92 137.01 66.60 106.06 127.72 53.32 46.06 52.84 62.11 58.95 51.09 20 E9a_E10a KnownJunction 0 27.71 22.43 26.97 60.66 55.35 21.35 36.52 37.30 19.30 71.69 144.77 123.19 153.89 194.42 101.86 59.73 102.10 63.96 58.26 45.25 59.37 53.89 44.13 21 E10_Aa NovelBoundary 0 3.56 2.57 14.55 14.05 8.49 0.00 12.01 8.38 4.75 14.05 0.00 6.30 0.00 4.59 0.00 20.25 16.18 3.56 13.74 12.46 5.50 3.12 0.00 22 ER10a ExonRegion 0 47.57 60.54 34.60 68.12 93.82 53.62 79.87 45.93 37.59 79.21 181.45 178.56 168.26 158.87 73.58 147.71 170.39 80.71 63.75 67.41 83.02 74.68 55.46 23 E10a_E11a KnownJunction 0 50.97 88.41 42.49 84.60 154.24 73.03 102.72 60.75 29.34 107.82 168.10 177.06 112.33 148.27 94.07 174.83 160.07 73.04 66.07 97.03 81.92 95.28 54.97 24 ER11a ExonRegion 0 39.47 60.48 65.65 96.84 93.75 51.31 75.31 41.74 33.93 103.42 164.48 181.22 158.09 157.87 87.76 186.22 145.38 91.47 59.44 78.27 99.03 99.37 92.36 25 E11a_E12a KnownJunction 0 33.64 65.32 59.19 97.52 85.57 65.30 109.74 52.49 30.93 112.28 144.35 172.41 114.44 194.95 178.63 236.69 123.42 104.26 25.41 68.39 86.43 89.34 135.47 26 ER12a ExonRegion 0 65.49 87.03 62.70 82.24 90.82 50.83 71.67 38.06 33.61 115.15 177.01 111.81 87.33 151.67 109.00 181.38 148.18 85.73 53.56 60.29 78.56 80.61 89.44 27 E12_Da NovelBoundary 0 0.00 8.75 1.60 3.46 4.33 0.00 8.30 5.79 0.00 3.01 0.00 0.00 13.31 4.89 0.00 0.00 0.00 0.00 18.45 0.00 0.00 2.94 3.24 28 E12a_E13a KnownJunction 0 82.90 59.59 61.03 75.95 53.65 34.81 49.64 41.16 23.67 101.35 94.34 106.53 79.38 130.97 119.04 154.66 127.26 94.72 80.00 70.88 43.31 69.74 57.36 29 ER13a ExonRegion 0 60.87 62.34 54.85 84.37 84.75 53.39 73.07 57.89 33.94 108.68 161.36 90.50 62.75 130.42 116.38 137.88 130.72 87.32 63.53 64.36 70.72 80.58 74.88 30 E13a_E14a KnownJunction 1 58.01 58.15 60.05 99.25 102.46 53.95 76.14 83.42 33.01 84.43 107.08 55.82 13.31 121.02 51.67 140.90 121.65 99.78 81.23 85.27 30.02 91.18 61.97 31 ER14a ExonRegion 0 63.62 71.29 66.96 96.32 96.12 47.21 67.48 56.79 36.36 85.54 139.37 99.29 54.21 132.61 138.61 143.33 162.50 107.54 60.66 72.15 75.49 94.83 91.09 32 E14a_E15a KnownJunction 0 121.35 58.54 59.19 91.76 177.84 57.07 71.76 48.39 34.11 85.34 146.14 138.20 73.70 133.09 154.77 115.53 167.93 102.76 76.43 70.95 72.77 110.71 65.39 33 ER15a ExonRegion 0 81.44 67.94 66.77 85.06 89.78 63.58 74.59 58.73 28.23 84.02 140.11 67.11 56.39 135.26 148.47 147.46 137.70 100.59 67.99 61.10 90.30 78.62 86.78 34 E15a_E16a KnownJunction 0 114.84 72.22 71.11 91.73 95.50 83.70 52.95 58.08 33.01 110.67 106.50 56.87 60.06 112.49 155.51 122.02 130.90 111.55 54.40 60.79 105.21 82.48 87.16 35 ER16a ExonRegion 1 76.87 68.73 62.15 84.34 68.58 61.60 64.63 54.32 28.39 107.57 181.49 49.62 44.56 141.90 169.55 161.26 126.01 119.49 75.58 72.23 91.39 78.70 78.76 36 E16a_E17a KnownJunction 0 92.83 69.33 40.36 60.93 114.26 58.60 102.37 65.31 45.57 101.00 130.61 49.07 75.81 184.00 190.00 135.43 122.21 78.14 92.33 72.29 57.70 52.60 68.03 37 E17_Aa NovelBoundary 0 6.74 0.00 3.10 0.00 12.99 0.00 1.90 21.69 2.95 2.31 0.00 0.00 6.82 2.41 4.45 0.00 0.00 0.00 3.95 3.26 6.30 0.00 4.18 38 ER17a ExonRegion 0 86.59 57.30 69.99 100.71 70.34 54.51 72.65 69.84 44.95 99.49 171.07 66.27 57.86 136.91 154.57 150.75 122.85 98.59 67.87 62.00 74.23 77.15 72.63 39 E17a_E18a KnownJunction 0 112.91 58.87 69.04 103.72 102.29 81.43 108.64 57.18 42.85 115.75 172.99 68.87 40.26 126.49 172.08 177.13 111.92 106.16 65.98 80.79 56.65 82.24 103.97 40 I17 Intron 0 4.57 1.22 6.14 3.65 9.95 4.84 4.77 16.07 2.65 4.10 4.87 1.71 4.04 3.67 4.63 2.50 2.38 1.55 1.15 1.79 1.32 3.00 4.58 41 I17_SR1 SilentIntronRegion 0 4.65 1.24 6.24 3.71 10.07 4.92 4.85 16.34 2.69 4.17 4.95 1.74 4.11 3.73 4.71 2.54 2.42 1.57 1.17 1.82 1.34 3.05 4.66 42 ER18a ExonRegion 0 114.10 58.08 64.71 100.36 91.58 66.22 73.26 62.11 44.64 90.82 150.87 78.95 63.13 145.59 181.67 152.41 107.78 94.05 63.10 83.12 52.77 75.38 77.01 43 E18a_E19a KnownJunction 0 156.40 88.27 71.58 134.28 110.19 63.26 84.57 75.62 47.05 90.44 148.93 55.82 32.79 142.27 206.56 126.12 113.79 72.46 79.72 84.75 79.82 76.30 63.00 44 ER19a ExonRegion 0 137.13 115.11 69.91 102.13 140.37 67.06 110.41 63.81 42.30 100.61 142.80 67.84 44.23 133.62 157.09 142.20 90.15 60.94 62.95 48.49 54.45 71.81 53.91 45 E19_Da NovelBoundary 0 0.00 6.05 3.16 14.72 23.09 7.67 15.59 20.87 4.77 15.55 2.42 6.30 0.00 0.00 4.45 3.59 0.00 0.00 0.00 3.20 0.00 5.39 4.35 46 E19a_E20a KnownJunction 0 162.10 117.48 63.78 84.11 213.07 103.12 173.47 83.91 33.22 89.77 133.67 78.03 39.45 145.33 172.94 144.24 107.99 36.81 49.13 56.69 58.87 74.40 53.35 47 I19 Intron 0 14.59 5.26 6.15 9.54 20.54 3.74 10.37 10.69 3.61 7.76 3.63 3.15 6.27 4.65 5.39 2.56 3.62 2.09 2.25 1.83 0.35 3.92 1.61 48 I19_SR1 SilentIntronRegion 0 16.94 4.01 6.73 9.95 25.77 2.27 10.81 8.54 5.64 7.71 6.25 5.35 2.78 4.55 5.64 3.12 4.23 2.02 4.02 2.52 0.49 4.87 0.66 49 I19_AR3 ActiveIntronRegion 0 22.70 11.04 10.56 14.04 23.08 4.60 12.74 13.13 4.70 11.58 3.28 0.00 2.77 6.36 7.07 3.54 6.25 3.71 3.84 2.29 0.00 2.99 4.22 50 E20_Aa NovelBoundary 0 21.56 3.22 12.09 8.56 97.96 22.43 36.21 20.74 3.33 14.37 4.37 0.00 0.00 4.94 4.45 3.25 12.62 2.57 11.86 11.12 8.59 4.96 12.21 51 ER20a ExonRegion 0 70.99 50.88 60.45 66.08 93.17 39.98 53.58 80.22 29.35 84.91 68.56 65.48 43.73 78.99 116.94 71.90 50.25 23.79 33.92 31.63 23.42 92.20 26.05 52 IG12_SR1 SilentIntergenicRegion 0 3.78 1.09 0.19 2.94 8.52 1.02 1.36 5.00 2.26 4.85 0.00 2.00 0.07 0.00 3.17 0.00 0.00 0.00 1.67 1.90 0.00 9.17 1.63