Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C3orf58 Gene 0 31.33 14.91 5.98 5.33 22.93 13.15 7.64 8.42 6.53 3.52 23.53 91.76 32.19 65.36 24.98 27.16 35.59 7.48 5.58 6.76 29.87 85.10 42.25 2 315691 Transcript 0 0.64 0.53 0.83 0.00 1.24 3.16 1.07 0.05 1.19 0.61 9.52 3.71 0.58 30.37 5.09 14.07 13.48 6.65 1.32 1.88 29.20 10.26 21.01 3 466922 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 469958 Transcript 0 0.82 1.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.75 2.76 1.49 2.18 0.79 4.59 3.83 0.00 1.23 0.82 2.55 0.00 2.27 5 493396 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.00 0.00 0.82 3.79 0.00 0.21 0.00 0.00 0.00 6 491798 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.37 0.00 0.00 0.00 0.00 0.85 0.00 0.00 0.00 0.00 1.59 0.00 0.00 0.00 0.00 0.00 0.00 7 492452 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 483808 Transcript 0 5.93 1.34 2.18 0.00 2.24 0.91 0.69 0.85 1.22 0.00 0.32 3.29 2.38 2.49 0.00 0.00 3.81 0.91 1.05 0.70 0.19 2.06 0.00 9 495414 Transcript 0 0.00 0.00 0.00 0.00 0.15 0.10 0.00 0.00 0.00 0.00 0.60 0.20 0.00 1.31 0.34 3.90 0.77 1.66 0.23 0.00 0.38 0.00 0.33 10 441925 Transcript 0 4.94 1.10 0.82 0.00 2.34 0.38 0.06 1.87 0.00 0.19 0.00 5.59 0.00 1.45 0.24 0.99 2.27 0.00 0.55 0.00 0.38 1.56 1.24 11 ER1a ExonRegion 0 0.00 0.00 1.00 0.00 0.98 3.25 0.00 0.00 0.64 0.62 5.67 0.00 0.00 11.26 1.57 6.32 2.92 3.07 0.58 0.82 3.56 1.81 8.29 12 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 7.21 0.00 0.00 1.16 0.00 7.37 0.00 0.00 9.06 4.57 11.96 9.16 5.93 0.00 9.27 14.83 3.12 20.74 13 ER1b ExonRegion 1 0.45 0.86 0.00 0.00 1.13 3.83 1.40 0.54 0.73 0.59 10.67 3.49 1.63 36.78 2.99 11.46 21.29 5.88 2.62 3.18 41.08 16.45 21.92 14 ER1c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 3.67 0.00 0.00 1.24 2.29 9.42 0.00 0.00 34.21 5.26 26.19 15.06 6.93 3.38 4.26 38.43 26.04 45.52 15 ER1d ExonRegion 0 0.00 1.65 0.00 0.00 0.00 3.02 0.00 0.00 0.41 1.58 11.60 0.99 1.47 32.89 9.25 19.19 15.27 5.97 2.59 2.66 33.93 13.80 23.43 16 E1_Db KnownBoundary 0 0.00 2.83 0.00 0.00 0.00 5.05 0.00 0.00 1.36 0.99 14.37 5.40 6.82 42.20 13.35 3.76 21.13 13.72 0.00 0.00 39.23 19.41 15.79 17 E1b_E1d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER1e ExonRegion 0 1.29 1.07 0.65 0.00 1.51 3.08 2.14 0.11 1.75 0.60 13.37 7.43 1.16 49.48 8.61 21.82 24.05 10.22 2.06 2.95 54.83 18.71 33.73 19 E1_Ad KnownBoundary 0 10.89 5.26 2.63 0.00 3.48 0.00 0.00 3.57 2.86 0.00 17.21 7.65 6.17 65.04 15.20 33.84 13.00 13.18 0.00 2.75 51.89 19.17 33.46 20 ER1f ExonRegion 0 2.36 2.79 1.78 0.00 0.36 5.58 1.31 1.18 4.61 0.00 22.32 6.56 1.40 66.29 10.86 29.69 21.23 9.58 5.06 8.36 69.38 26.48 29.31 21 E1_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 1.68 0.00 1.22 0.00 4.69 5.70 0.00 28.19 0.00 13.76 12.53 7.54 0.00 9.65 12.85 22.53 19.80 22 E1_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 23 E1_Af KnownBoundary 0 5.63 0.00 0.00 2.00 0.00 5.79 0.00 1.77 1.50 0.00 7.48 12.45 0.00 30.43 0.00 11.02 14.21 25.16 4.61 5.62 39.29 14.57 11.01 24 ER1g ExonRegion 1 0.00 0.00 0.61 0.00 0.00 5.81 1.32 0.00 2.47 0.00 9.66 8.66 0.00 52.78 5.80 22.79 16.50 9.24 3.19 7.80 30.48 26.39 20.07 25 ER1h ExonRegion 1 2.82 0.00 0.00 0.00 0.00 5.96 0.00 0.00 2.37 0.00 8.38 4.33 0.00 56.71 5.08 11.39 13.75 13.09 3.19 10.64 28.65 27.09 21.05 26 ER1i ExonRegion 1 2.90 0.98 0.67 0.87 0.64 6.42 0.32 1.64 3.02 1.26 15.27 7.11 0.00 77.28 7.94 31.03 23.09 16.33 5.18 8.44 47.49 24.90 38.61 27 E1_Ag KnownBoundary 1 0.00 0.00 3.67 1.63 0.00 0.00 0.00 2.42 0.00 0.00 7.79 5.70 0.00 42.32 0.00 19.57 27.77 11.86 0.00 5.69 24.28 8.33 31.16 28 E1_Ah KnownBoundary 0 0.00 2.89 0.00 0.00 4.33 11.58 0.00 0.00 0.00 0.00 7.84 0.00 0.00 36.91 4.45 7.86 14.03 0.00 4.42 0.00 23.78 20.64 38.24 29 ER1j ExonRegion 1 0.00 0.00 1.23 1.36 0.54 7.34 0.00 1.73 2.72 2.06 12.95 4.33 0.00 74.22 5.80 27.64 45.88 18.11 5.73 7.66 44.29 26.67 53.74 30 E1_Dd KnownBoundary 1 3.26 2.50 0.00 0.00 4.33 13.12 5.48 1.89 5.12 4.59 19.37 18.01 0.00 73.81 8.90 37.60 49.56 29.97 9.41 8.95 47.94 26.33 36.71 31 E1d_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER1k ExonRegion 1 1.20 0.80 1.23 0.41 2.68 11.96 1.78 2.56 4.03 3.09 17.06 4.14 0.00 78.88 8.70 32.18 48.08 23.30 9.14 8.42 47.91 30.44 52.35 33 ER1l ExonRegion 1 4.47 7.95 1.98 1.58 2.80 6.72 3.41 6.20 7.02 2.82 33.64 21.65 10.75 124.24 20.73 44.52 69.95 32.70 6.51 9.37 87.11 49.89 67.21 34 E1e_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E1e_E6a KnownJunction 0 7.19 0.00 2.96 3.40 8.23 4.66 0.00 9.69 6.83 0.00 39.64 12.60 19.64 118.61 24.72 31.10 65.08 20.31 4.61 6.07 61.65 40.60 86.73 36 E1e_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.14 0.00 0.00 0.00 0.00 0.00 37 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.16 0.00 0.00 1.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.72 0.03 0.00 0.73 0.00 2.25 0.82 0.00 0.69 0.66 1.28 0.64 0.00 39 E2_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.26 3.55 0.00 4.33 0.00 2.29 0.00 0.00 40 E2a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER2c ExonRegion 0 0.00 0.00 0.00 0.00 0.44 0.30 0.00 0.00 0.00 0.00 0.64 0.59 0.00 2.47 1.02 3.49 2.30 0.70 0.68 0.00 1.15 0.00 0.98 42 E2b_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.20 0.00 4.27 0.00 0.00 0.00 0.00 0.00 43 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.70 0.00 0.00 6.80 0.00 1.66 0.00 1.15 0.00 1.53 44 E3a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER4a ExonRegion 0 0.82 1.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.75 2.76 1.49 2.18 0.79 4.59 3.83 0.00 1.23 0.82 2.55 0.00 2.27 46 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.11 0.00 0.00 0.00 0.00 2.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 48 ER6a ExonRegion 1 5.71 3.76 3.68 3.54 4.68 13.30 1.79 6.91 5.37 0.00 45.52 27.93 18.29 108.90 14.22 28.83 70.80 21.53 3.19 5.64 73.71 49.17 86.48 49 ER6b ExonRegion 1 19.02 15.46 5.42 6.00 16.77 13.95 4.58 7.86 10.71 2.20 60.11 102.66 35.89 137.41 17.12 55.08 88.69 21.99 14.29 17.04 94.17 107.24 103.25 50 E6_Db KnownBoundary 0 0.00 0.00 1.42 0.00 0.00 0.00 1.72 0.00 0.00 0.00 0.00 6.30 13.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 51 E6b_E7a KnownJunction 0 15.56 27.17 1.83 3.40 12.05 19.65 7.86 11.62 14.84 6.07 42.33 248.78 74.83 130.91 41.66 59.47 95.93 29.72 21.93 23.27 78.40 143.10 127.11 52 ER6c ExonRegion 0 5.93 1.34 2.18 0.00 2.24 0.91 0.69 0.85 1.22 0.00 0.32 3.29 2.38 2.49 0.00 0.00 3.81 0.91 1.05 0.70 0.19 2.06 0.00 53 ER7a ExonRegion 1 21.92 24.56 4.54 7.08 21.12 23.22 10.23 12.85 15.37 5.57 57.27 165.64 49.53 175.33 22.64 77.22 105.83 26.61 20.51 17.04 121.76 155.23 118.61 54 E7_Da KnownBoundary 1 26.45 25.78 6.68 8.62 33.53 24.64 3.71 13.35 16.15 3.14 51.96 62.27 34.41 161.11 23.86 59.30 84.62 24.50 7.34 5.62 121.08 78.20 82.63 55 ER7b ExonRegion 0 22.03 19.65 3.54 6.15 25.79 18.46 10.77 9.67 8.37 3.42 35.02 151.46 56.34 99.63 26.80 50.71 62.36 10.49 6.80 8.93 37.36 142.37 74.21 56 E7_Db KnownBoundary 0 28.52 12.76 3.25 10.72 27.16 5.79 8.04 5.63 18.03 3.01 34.11 257.33 73.86 86.17 41.04 56.57 26.27 6.67 4.42 11.76 15.57 201.34 75.55 57 ER7c ExonRegion 0 81.19 30.86 14.93 11.86 53.93 24.11 16.20 18.19 11.18 7.81 30.40 175.49 61.36 77.40 56.06 27.36 36.93 3.55 6.52 8.59 15.59 150.66 45.01 58 ER7d ExonRegion 0 14.82 3.30 2.45 0.00 7.02 1.15 0.17 5.62 0.00 0.57 0.00 16.78 0.00 3.65 0.73 2.97 0.00 0.00 0.00 0.00 0.00 4.69 2.20 59 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.52 0.00 0.00 0.03 2.40 0.00 0.83 0.00 0.00 0.00 60 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.14 0.00 0.00 0.00 0.00 0.00 61 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.24 2.49 0.00 0.00 0.00 0.00 0.00