Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 IL20RB Gene 0 5.83 2.63 2.73 8.12 2.69 1.09 1.96 1.80 4.67 2.47 2.01 1.01 2.48 3.53 5.79 1.97 5.33 5.63 2.17 6.05 8.02 1.42 0.90 2 484501 Transcript 0 1.44 0.00 0.00 0.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.89 1.78 0.00 0.00 0.00 0.50 0.00 0.00 3 309741 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 329582 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 469964 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 462176 Transcript 0 0.79 0.74 0.66 0.36 0.21 0.32 0.64 1.11 0.81 0.61 0.00 0.01 1.49 0.41 0.84 0.01 2.43 1.11 0.52 2.87 0.22 0.32 0.51 7 491483 Transcript 0 0.00 1.74 0.00 0.00 0.51 0.00 0.03 0.00 0.00 0.02 0.00 0.16 0.00 0.22 0.01 0.00 0.00 0.00 0.00 0.81 0.00 0.00 0.00 8 475972 Transcript 0 0.40 0.76 0.00 0.00 0.00 0.34 0.00 0.00 0.69 0.32 0.00 0.00 0.67 0.25 0.00 0.00 0.00 0.86 0.00 0.79 0.41 0.00 0.00 9 ER1a ExonRegion 0 1.35 0.00 0.00 0.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.31 0.85 0.00 0.00 0.00 1.50 0.00 0.00 10 E1a_E2b KnownJunction 0 2.96 0.00 0.00 2.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 4.49 0.00 0.00 0.00 0.00 0.00 0.00 11 Ix Intron 0 18.14 5.38 1.40 2.41 16.59 4.98 10.15 4.31 5.77 3.81 5.79 9.62 9.09 8.19 4.85 3.93 4.37 3.40 0.89 4.15 7.21 7.40 3.68 12 Ix_AR1 ActiveIntronRegion 0 19.01 7.66 1.00 2.88 10.66 4.65 14.86 2.74 5.28 3.33 4.47 15.83 7.20 10.74 2.43 4.48 3.92 2.61 0.00 4.58 11.31 8.49 3.96 13 Ix_SR1 SilentIntronRegion 0 17.93 4.70 1.53 2.27 18.48 5.10 8.73 4.80 5.94 3.97 6.22 7.74 9.70 7.43 5.62 3.78 4.53 3.65 1.16 4.03 5.98 7.09 3.61 14 I1_AR1 ActiveIntronRegion 0 19.85 10.74 6.98 16.23 23.70 7.77 9.80 8.41 10.36 9.44 6.04 14.49 11.37 6.22 7.20 5.06 6.19 2.75 1.66 9.90 2.45 19.04 5.71 15 E2_Ab NovelBoundary 0 11.26 0.00 0.00 0.00 0.00 0.00 5.87 2.42 4.11 2.15 0.00 0.00 0.00 0.00 0.00 3.85 3.93 9.12 0.00 5.18 3.15 0.00 3.84 16 ER2a ExonRegion 0 3.28 0.00 0.00 0.13 0.00 0.00 0.77 0.00 1.08 0.74 0.00 0.00 0.00 0.00 0.66 0.10 1.38 4.17 0.00 1.03 2.27 0.00 0.00 17 ER2b ExonRegion 0 1.17 1.82 2.01 1.83 1.13 0.00 4.12 0.00 4.01 1.33 0.86 0.84 1.73 3.01 3.03 0.55 5.91 5.90 1.43 6.55 4.00 0.00 0.00 18 E2_Ac KnownBoundary 0 0.00 0.00 2.81 2.06 0.00 0.00 2.03 0.00 6.51 0.00 0.00 7.65 0.00 0.00 8.78 0.00 4.77 4.02 0.00 2.43 3.09 0.00 0.00 19 ER2c ExonRegion 0 1.73 0.54 2.69 2.97 2.88 0.49 1.65 1.37 5.76 2.26 2.17 3.02 2.13 1.49 4.82 0.12 5.66 2.66 0.85 7.04 8.29 1.68 0.00 20 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E2a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 14.52 6.25 0.00 22 E2a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER3a ExonRegion 0 1.26 2.17 1.96 0.97 0.64 0.66 1.89 1.81 2.41 1.83 0.00 0.00 2.40 0.46 2.48 0.00 6.29 3.28 1.52 4.07 0.53 0.25 0.00 24 E3a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E4_Aa NovelBoundary 0 79.27 111.82 195.41 338.68 43.46 103.24 123.39 217.86 250.40 167.30 37.96 0.00 19.48 11.48 16.32 107.58 90.04 692.81 152.76 304.37 122.13 47.33 84.00 26 ER4a ExonRegion 0 0.00 0.77 0.00 0.00 1.02 0.00 0.07 0.00 0.00 0.03 0.00 0.32 0.00 0.44 0.02 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 27 E4_Da NovelBoundary 0 16.60 15.06 12.98 7.96 4.16 11.41 7.99 13.47 7.52 8.57 6.90 0.00 0.00 4.53 6.06 20.25 4.21 9.37 8.19 18.73 14.21 0.00 18.69 28 E4a_E5a KnownJunction 0 0.00 2.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E5_Aa NovelBoundary 0 90.53 112.15 177.20 310.52 60.44 51.67 112.70 251.09 207.35 212.64 39.85 0.00 14.12 7.59 27.20 36.06 103.13 238.98 80.38 107.06 58.13 68.09 63.94 30 ER5a ExonRegion 0 4.42 3.75 0.83 1.74 1.57 0.69 4.22 0.00 3.31 1.55 0.74 4.55 8.59 2.04 2.35 3.13 3.50 2.61 1.19 1.63 4.21 0.81 1.10 31 E5_Ab KnownBoundary 0 3.78 0.00 1.48 1.50 4.33 0.00 3.62 0.00 3.01 1.67 0.00 0.00 0.00 0.00 5.19 0.00 14.03 2.57 0.00 0.00 0.00 0.00 0.00 32 E5_Ac KnownBoundary 0 0.00 5.26 0.00 2.06 0.00 0.00 1.68 0.00 1.79 1.02 2.16 0.00 0.00 0.00 0.00 0.00 7.76 3.32 0.00 2.68 4.94 0.00 0.00 33 ER5b ExonRegion 0 2.12 0.25 2.45 3.07 2.68 0.00 2.65 0.00 5.40 2.87 1.93 0.00 0.00 0.00 4.35 0.74 13.20 1.85 0.00 2.93 13.22 4.17 0.00 34 ER5c ExonRegion 0 2.08 3.50 1.03 5.31 3.79 0.00 3.21 1.96 3.28 2.42 2.16 1.39 1.39 4.43 6.00 1.59 5.01 3.07 1.67 6.51 8.24 0.55 0.00 35 E5a_E6b KnownJunction 0 0.00 0.00 1.54 13.45 0.00 0.00 6.71 1.64 3.18 0.00 0.00 6.60 6.17 4.89 0.00 3.67 0.00 6.43 3.95 2.43 17.17 0.00 0.00 36 ER6a ExonRegion 0 1.10 0.06 0.01 0.11 0.00 0.32 0.04 1.52 0.03 0.00 0.00 0.04 2.06 0.78 0.03 0.03 1.01 0.06 0.03 4.54 0.13 0.70 1.53 37 E6_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 6.52 0.00 3.06 0.00 38 ER6b ExonRegion 0 2.29 0.00 0.85 9.16 0.00 1.73 2.57 0.77 3.26 0.03 0.27 1.44 4.17 7.40 5.64 2.97 1.93 7.60 3.19 6.56 10.83 3.07 0.00 39 E6_Da KnownBoundary 0 3.63 2.76 0.00 10.39 0.00 0.00 0.00 0.00 4.66 1.26 0.00 0.00 8.28 4.59 10.88 0.00 0.00 13.56 4.33 8.25 5.19 2.88 0.00 40 ER6c ExonRegion 0 3.67 1.20 1.17 10.58 0.71 0.00 1.00 2.56 3.09 2.62 1.86 0.00 3.41 4.23 4.67 0.04 6.45 7.03 0.10 5.55 14.60 0.91 1.95 41 E6_Db NovelBoundary 0 13.56 0.00 0.00 13.42 0.00 0.00 2.16 0.00 4.72 1.16 7.74 7.65 0.00 11.60 10.75 0.00 4.11 12.56 0.00 6.01 8.28 0.00 4.35 42 E6b_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E6b_E8a KnownJunction 0 0.00 2.76 0.00 8.59 3.48 0.00 4.06 0.00 1.53 2.69 0.00 0.00 0.00 2.83 0.00 0.00 0.00 1.62 0.00 0.00 20.08 0.00 0.00 44 E7_Aa NovelBoundary 0 13.93 3.03 1.83 3.16 0.00 0.00 0.00 2.51 3.01 2.95 0.00 0.00 0.00 0.00 5.44 0.00 0.00 1.66 0.00 2.75 0.00 0.00 0.00 45 ER7a ExonRegion 0 1.21 2.28 0.00 0.00 0.00 1.03 0.00 0.00 2.06 0.96 0.00 0.00 2.01 0.75 0.00 0.00 0.00 2.58 0.00 2.38 1.24 0.00 0.00 46 E7_Da NovelBoundary 0 7.26 9.21 108.42 21.51 4.33 15.45 34.93 44.81 50.84 39.81 0.00 0.00 0.00 0.00 0.00 4.02 12.62 61.48 8.85 29.91 17.11 2.57 0.00 47 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 ER8a ExonRegion 0 8.66 1.92 1.32 13.73 6.39 0.00 1.91 0.00 0.62 2.17 0.18 2.49 5.91 5.83 7.41 0.00 2.38 6.95 7.73 4.33 13.96 0.00 0.00 49 E8_Da KnownBoundary 0 15.85 2.76 2.90 18.01 7.72 0.00 4.42 0.00 0.00 3.49 0.00 6.30 6.82 12.60 6.30 0.00 4.49 15.92 7.72 2.88 11.37 0.00 0.00 50 ER8b ExonRegion 0 7.75 0.32 0.54 8.23 5.58 0.00 1.66 0.37 2.49 2.97 1.91 3.23 2.51 5.74 9.23 0.00 5.16 11.82 0.90 7.61 15.89 2.23 4.22 51 E8b_E9a KnownJunction 0 10.89 0.00 1.30 6.43 3.57 0.00 2.25 1.89 3.15 1.67 4.53 0.00 0.00 4.59 10.26 0.00 3.65 6.92 0.00 10.80 14.46 5.39 0.00 52 E8b_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.49 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 53 ER9a ExonRegion 0 9.17 1.37 1.40 13.41 4.54 0.72 0.98 2.38 4.64 2.42 2.80 0.00 0.00 4.04 4.00 5.02 7.98 7.46 0.74 6.16 11.11 1.21 1.36 54 E9a_E10a KnownJunction 0 13.26 3.35 1.83 10.65 3.74 0.00 2.21 6.00 4.34 5.51 5.05 0.00 0.00 2.24 9.64 0.00 0.00 9.24 4.42 21.35 12.36 2.57 4.27 55 ER10a ExonRegion 0 10.79 5.44 0.55 15.40 1.09 2.86 2.09 1.51 7.12 2.54 3.62 0.00 1.01 6.76 6.21 2.01 6.18 9.56 0.96 12.17 11.73 2.60 1.74 56 E10_Da KnownBoundary 0 6.96 2.50 0.00 14.95 0.00 0.00 2.21 0.00 9.29 2.15 4.69 0.00 0.00 0.00 0.00 3.67 4.77 13.14 4.05 9.01 10.87 5.39 4.35 57 ER10b ExonRegion 0 3.81 2.32 0.51 13.71 3.05 0.00 0.56 2.01 8.23 4.61 3.13 0.00 0.00 6.07 1.97 11.89 3.70 6.13 3.12 5.23 16.79 2.67 1.64 58 E10b_E11a KnownJunction 0 3.56 0.00 1.54 13.12 11.97 0.00 0.00 3.94 8.54 5.59 2.26 0.00 0.00 7.06 10.01 11.79 4.77 4.73 3.86 3.20 17.67 2.69 0.00 59 ER11a ExonRegion 0 11.29 4.39 5.95 15.30 4.65 2.32 2.51 3.02 7.98 3.97 3.90 1.13 2.91 5.76 11.06 3.58 6.88 8.58 4.34 8.46 12.10 2.67 1.40 60 ER11b ExonRegion 0 16.93 2.03 0.00 0.00 0.00 1.83 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 8.70 0.00 3.30 0.00 0.00 2.13 11.02 0.00 0.00 61 ER11c ExonRegion 0 7.41 1.02 0.00 0.00 0.00 0.31 0.00 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.48 0.00 0.00 0.00 0.00 0.71 0.73 0.00 0.00