Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 P2RY12 Gene 0 11.55 0.22 1.50 4.62 10.79 17.16 3.70 2.47 13.69 2.06 0.00 0.22 0.76 0.63 1.04 0.16 1.45 0.25 0.44 3.50 0.12 0.46 0.00 2 302632 Transcript 0 5.94 0.00 0.48 0.86 5.57 3.23 1.19 1.91 2.97 0.01 0.00 0.60 0.00 0.27 0.87 0.00 0.00 0.00 0.00 1.36 0.00 0.00 0.00 3 489717 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 468596 Transcript 0 0.63 0.00 0.00 0.00 0.00 23.04 1.67 0.00 0.00 0.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.94 0.00 0.00 0.00 5 427837 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 455408 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 0.25 0.00 0.00 0.00 4.73 1.19 0.00 0.00 0.16 0.00 0.00 0.00 0.00 0.54 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 12.48 5.17 0.00 0.00 1.10 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 18.63 0.00 0.00 0.00 20.48 11.06 2.56 0.00 13.65 2.71 0.00 0.00 0.00 0.59 4.38 0.00 2.65 0.00 0.00 0.00 0.00 0.00 0.00 10 E1a_E2c KnownJunction 0 17.41 0.00 0.00 0.00 10.27 11.53 3.93 0.00 25.61 4.75 0.00 0.00 0.00 0.00 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2a ExonRegion 0 0.63 0.00 0.00 0.00 0.00 23.04 1.67 0.00 0.00 0.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.94 0.00 0.00 0.00 12 E2_Ab KnownBoundary 0 3.48 0.00 0.00 0.00 0.00 40.77 4.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.07 0.00 0.00 0.00 13 ER2b ExonRegion 0 2.57 0.00 0.00 0.00 0.51 15.46 2.68 0.00 0.53 1.27 0.00 0.00 0.00 0.00 0.08 0.00 0.09 0.00 0.00 5.29 2.08 0.00 0.00 14 E2_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 1.81 0.00 0.00 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.82 2.97 0.00 0.00 15 ER2c ExonRegion 0 5.32 0.67 0.58 0.99 5.22 6.34 1.15 0.00 12.12 3.87 0.00 1.35 0.00 0.83 3.49 0.00 0.52 0.00 0.00 5.03 0.90 0.00 0.00 16 E2a_E3a KnownJunction 0 10.45 0.00 3.67 3.50 42.02 13.97 0.00 0.00 7.64 2.93 0.00 0.00 0.00 0.00 5.07 0.00 4.39 0.00 0.00 3.26 0.00 0.00 0.00 17 E3_Ab NovelBoundary 0 2.96 3.09 0.00 3.13 24.53 12.66 1.99 1.56 3.67 1.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 6.35 2.03 2.45 2.73 32.29 16.99 1.32 0.92 7.25 2.98 0.00 0.00 0.00 0.00 1.93 0.00 3.30 0.00 0.00 2.13 0.00 0.00 0.00 19 ER3b ExonRegion 0 8.87 0.23 2.09 3.53 5.77 16.14 3.61 2.09 8.79 2.25 0.00 0.00 0.67 0.23 0.77 0.00 4.59 0.00 1.40 3.81 0.00 0.36 0.00 20 E3_Da KnownBoundary 0 7.56 0.00 0.00 5.46 7.05 10.22 1.77 2.01 8.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.02 0.00 4.80 0.00 0.00 0.00 0.00 21 E3a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E3a_E3d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER3c ExonRegion 0 10.05 0.36 0.32 3.09 7.61 15.06 4.06 2.69 13.65 1.09 0.00 0.00 2.17 0.18 0.00 0.64 1.61 0.80 0.84 1.79 0.00 0.19 0.00 24 E3_Ac KnownBoundary 0 9.48 0.00 0.00 3.23 3.99 0.00 4.02 3.74 9.75 0.00 0.00 0.00 0.00 2.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E3_Ad KnownBoundary 0 3.70 0.00 0.00 3.20 3.23 2.27 0.00 1.56 5.67 4.65 0.00 0.00 0.00 0.00 0.00 3.67 0.00 0.00 0.00 3.26 0.00 0.00 0.00 26 ER3d ExonRegion 0 8.47 0.00 0.00 8.18 8.03 7.34 3.97 5.19 18.53 4.59 0.00 0.00 0.00 1.62 0.00 2.97 3.30 1.85 3.19 4.26 0.00 2.08 0.00 27 ER3e ExonRegion 0 12.22 0.00 0.84 7.02 9.09 28.09 2.57 4.83 19.26 4.68 0.00 0.00 1.95 1.50 0.00 1.12 1.24 0.62 1.51 2.11 0.00 0.47 0.00 28 E3_Db KnownBoundary 0 14.30 0.00 1.39 4.66 19.78 31.23 2.25 4.15 18.06 3.33 0.00 0.00 0.00 4.94 0.00 0.00 4.39 1.66 0.00 5.82 0.00 0.00 0.00 29 ER3f ExonRegion 0 17.16 0.00 3.58 8.33 16.73 20.10 5.27 1.94 23.96 2.94 0.00 0.00 1.16 1.42 0.95 0.00 1.33 0.50 0.00 5.00 0.00 0.93 0.00 30 E3_Dc KnownBoundary 0 20.82 0.00 0.00 8.26 21.65 8.35 8.79 4.03 13.60 3.81 0.00 0.00 0.00 0.00 8.90 0.00 0.00 0.00 0.00 20.33 0.00 0.00 0.00 31 ER3g ExonRegion 0 13.88 0.45 1.57 7.11 19.99 23.51 5.19 3.87 14.81 1.29 0.00 0.00 0.00 0.60 1.32 0.00 0.00 0.00 0.00 4.79 0.00 0.93 0.00 32 E3_Dd KnownBoundary 0 37.64 0.00 4.61 1.93 4.24 31.86 4.06 11.21 6.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 33 ER3h ExonRegion 0 18.79 0.00 1.62 8.25 11.52 24.27 4.79 6.33 14.32 1.24 0.00 0.71 0.00 0.49 0.75 0.00 0.00 0.00 0.00 3.59 0.00 0.76 0.00 34 E3_De KnownBoundary 0 20.30 3.35 1.60 6.79 18.34 18.40 2.25 6.41 11.83 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.75 0.00 0.00 0.00 35 ER3i ExonRegion 0 11.64 0.00 0.96 1.72 6.41 5.26 2.38 3.81 5.78 0.02 0.00 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.72 0.00 0.00 0.00