Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DBR1 Gene 0 26.47 44.84 23.30 26.38 46.94 34.03 41.93 23.79 23.19 37.68 48.75 46.57 37.06 47.17 33.87 37.93 36.76 24.11 18.71 30.65 15.75 27.83 16.87 2 260803 Transcript 0 41.00 58.31 30.44 34.04 73.35 60.88 73.34 27.27 31.68 57.28 98.63 69.87 78.52 89.91 58.23 90.77 60.17 30.39 35.28 50.17 26.98 52.64 26.57 3 463982 Transcript 0 10.50 10.08 20.09 13.90 7.33 10.05 11.04 13.22 13.54 18.97 5.29 6.15 14.01 8.88 16.73 10.65 5.08 17.40 12.54 12.69 4.53 8.02 10.05 4 477557 Transcript 0 0.55 0.08 0.82 0.40 0.00 0.00 0.39 0.58 0.41 0.00 0.00 0.16 0.00 0.06 0.00 0.00 0.24 0.00 0.00 0.24 0.00 0.00 0.00 5 460271 Transcript 0 11.10 25.51 16.40 26.66 29.72 15.35 23.10 8.76 15.52 12.71 6.64 12.85 7.51 3.77 5.47 4.43 5.62 2.21 0.88 10.34 1.02 7.64 3.47 6 ER1a ExonRegion 1 8.57 14.53 3.59 3.72 15.92 36.36 16.65 4.85 3.65 3.37 28.05 1.64 0.92 47.04 25.37 14.61 21.98 3.40 10.18 20.21 18.97 11.21 15.94 7 E1_Ab KnownBoundary 0 42.30 50.98 11.83 11.69 36.42 103.92 63.20 7.23 14.90 13.40 71.28 12.75 6.49 72.28 50.68 50.67 72.09 69.43 48.94 77.53 74.69 16.10 33.63 8 ER1b ExonRegion 0 21.98 24.12 7.35 6.12 15.50 32.28 16.74 6.61 8.83 16.80 33.36 9.13 9.77 36.40 25.12 34.08 47.34 7.77 15.67 43.25 30.70 10.99 12.87 9 E1_Ac KnownBoundary 0 9.71 7.89 3.31 3.13 0.00 10.16 12.81 2.38 6.28 19.15 26.64 0.00 0.00 11.54 0.00 7.35 12.06 15.96 12.89 10.48 26.01 5.57 0.00 10 ER1c ExonRegion 1 4.63 9.35 13.63 12.67 12.05 12.60 9.84 12.93 16.55 28.80 63.25 6.78 9.79 69.88 31.57 55.74 58.91 83.09 23.86 44.81 38.77 21.24 23.16 11 E1a_E2a KnownJunction 1 3.11 33.02 25.93 22.31 42.36 55.48 36.17 26.62 31.16 51.52 65.81 31.51 35.22 92.41 26.33 154.23 51.99 131.61 21.08 36.50 16.00 30.62 27.57 12 ER2a ExonRegion 1 8.65 49.28 27.03 23.04 35.41 80.76 55.26 34.21 31.10 67.58 114.33 33.60 34.59 101.14 38.74 95.61 91.50 59.91 28.46 51.18 44.89 47.09 21.07 13 E2a_E3a KnownJunction 0 24.30 55.98 12.24 19.54 44.65 17.89 46.59 41.53 25.20 77.12 78.23 36.46 20.29 68.10 37.46 44.26 78.45 30.92 22.49 43.85 36.82 46.72 29.62 14 E2a_E5a NovelJunction 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.95 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E2a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E3_Aa NovelBoundary 0 15.04 13.48 4.85 5.46 11.29 4.60 14.49 10.10 11.11 34.87 21.48 0.00 0.00 2.41 0.00 10.51 33.75 11.90 7.72 18.34 7.48 17.33 10.50 17 ER3a ExonRegion 0 42.41 66.25 34.99 29.82 38.19 37.45 41.17 39.01 41.00 78.74 128.19 46.82 61.26 98.23 48.35 105.79 98.66 63.26 28.24 63.62 35.18 63.66 36.58 18 E3_Da NovelBoundary 0 0.00 0.00 6.62 19.21 7.05 0.00 7.33 16.43 5.79 11.52 0.00 6.30 12.99 2.24 0.00 0.00 4.58 1.87 0.00 8.12 0.00 0.00 3.24 19 E3a_E4a KnownJunction 0 0.00 0.00 6.89 0.00 0.00 5.45 0.00 0.00 0.00 5.78 0.00 0.00 0.00 5.30 0.00 0.00 0.00 6.34 0.00 0.00 0.00 2.39 0.00 20 E3a_E5a KnownJunction 1 70.23 67.22 32.64 35.16 67.83 83.82 59.49 41.16 52.23 81.18 204.89 78.33 124.02 176.59 97.90 222.76 104.25 72.83 43.48 98.69 54.24 96.01 71.19 21 E4_Aa NovelBoundary 0 152.99 96.04 13.81 17.81 55.60 35.32 86.96 18.15 10.82 12.09 10.79 11.40 12.66 6.89 5.44 37.85 17.86 15.92 26.07 18.28 14.76 7.29 19.46 22 ER4a ExonRegion 1 21.01 20.16 33.30 27.81 14.65 14.66 22.07 26.44 27.09 32.16 10.57 12.29 28.01 12.46 33.45 21.30 10.17 28.46 25.08 25.39 9.05 13.66 20.10 23 E4_Da NovelBoundary 1 2139.42 2399.64 3365.29 3333.97 2382.85 1400.44 2284.01 3553.77 3739.20 2859.97 1087.33 356.97 497.21 379.54 764.82 2013.23 2209.72 3623.94 1852.01 2370.18 1422.42 885.56 2041.37 24 E5_Aa NovelBoundary 0 16.89 6.51 1.12 5.29 11.29 25.21 30.87 8.91 10.39 12.81 2.53 6.30 0.00 0.00 9.64 21.02 4.49 1.99 0.00 8.88 0.00 0.00 4.10 25 ER5a ExonRegion 0 25.74 49.63 25.08 34.80 73.40 64.52 66.29 30.57 31.88 76.76 93.93 68.62 100.24 108.40 50.70 118.47 62.95 31.30 34.63 53.96 22.65 58.85 27.08 26 E5_Da NovelBoundary 0 10.45 22.69 10.79 10.52 7.72 13.17 7.68 8.42 19.27 1.24 5.05 13.05 6.33 7.77 0.00 3.42 4.77 0.00 0.00 12.34 0.00 9.06 0.00 27 E5a_E6a KnownJunction 1 13.34 56.37 36.04 38.02 120.03 74.84 111.78 27.97 29.34 72.74 84.50 68.12 128.56 46.74 53.77 68.87 67.23 17.53 75.01 22.05 8.71 73.66 11.35 28 E6_Aa NovelBoundary 0 19.86 14.34 12.83 7.82 21.65 25.04 33.96 2.01 1.48 6.77 7.37 6.30 7.95 7.36 9.52 0.00 7.85 4.19 4.52 8.05 0.00 3.00 0.00 29 ER6a ExonRegion 0 28.02 61.05 37.04 45.99 109.24 66.66 89.28 40.65 40.10 77.13 120.07 140.33 127.38 114.61 57.03 88.40 95.96 48.68 47.27 55.43 35.72 59.73 45.90 30 E6_Da NovelBoundary 0 13.63 0.00 8.75 13.45 16.38 21.58 18.24 5.71 7.78 14.51 4.84 17.56 5.84 6.83 5.93 4.19 0.00 0.00 4.42 15.28 3.03 5.27 15.37 31 E6a_E7b KnownJunction 1 34.75 79.79 29.48 43.08 118.34 99.37 83.03 41.77 29.77 91.95 134.56 167.30 142.69 157.46 50.56 103.14 79.66 80.17 12.80 56.82 46.77 58.36 23.30 32 E6a_E8a NovelJunction 0 0.00 0.00 0.00 2.06 4.24 0.00 0.00 0.00 0.00 0.00 14.69 0.00 0.00 4.94 0.00 4.36 4.77 0.00 4.42 0.00 0.00 2.88 0.00 33 E7_Aa NovelBoundary 0 49.56 44.07 16.68 16.91 19.78 14.65 20.62 16.06 16.98 12.65 7.69 25.06 13.64 2.47 4.45 4.19 13.93 1.82 0.00 6.20 0.00 11.63 8.45 34 ER7a ExonRegion 0 11.10 25.51 16.40 26.66 29.72 15.35 23.10 8.76 15.52 12.71 6.64 12.85 7.51 3.77 5.47 4.43 5.62 2.21 0.88 10.34 1.02 7.64 3.47 35 E7_Ab KnownBoundary 0 17.11 49.79 20.02 36.96 47.88 29.70 63.46 12.49 11.95 18.48 1.95 17.56 12.82 7.24 8.90 7.60 0.00 1.95 4.42 11.76 3.15 11.21 4.35 36 ER7b ExonRegion 0 38.02 94.18 35.78 53.25 144.29 103.52 117.85 58.57 44.02 76.41 124.00 171.72 118.54 150.01 61.40 95.70 119.16 59.91 53.04 73.78 34.30 61.85 50.69 37 E7_Da NovelBoundary 0 13.63 0.00 11.06 1.23 4.33 5.34 8.17 4.19 7.58 4.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 38 E7a_E8a KnownJunction 0 46.08 97.48 38.20 37.52 227.42 159.00 156.91 54.09 40.45 76.18 130.98 135.94 97.56 116.49 57.36 141.33 97.99 48.33 76.05 79.64 25.33 56.03 74.10 39 E7b_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER7c ExonRegion 0 1.65 0.23 2.45 1.21 0.00 0.00 1.18 1.73 1.24 0.00 0.00 0.48 0.00 0.18 0.00 0.00 0.73 0.00 0.00 0.71 0.00 0.00 0.00 41 E8_Aa NovelBoundary 0 6.52 6.58 4.67 17.48 0.00 20.22 9.01 2.01 2.40 6.29 0.00 7.65 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 42 E8_Ab NovelBoundary 0 25.78 13.09 24.19 20.14 57.89 31.69 41.78 16.22 19.97 38.28 43.43 39.61 19.80 53.09 4.94 54.60 10.75 25.00 22.02 25.18 14.27 23.82 29.79 43 ER8a ExonRegion 1 35.19 68.38 36.00 31.35 177.27 124.24 112.21 43.43 39.83 73.98 123.71 136.38 93.80 124.85 37.35 109.23 90.77 49.43 59.33 67.55 25.89 57.82 64.97 44 ER8b ExonRegion 0 48.45 77.95 43.27 49.46 119.57 72.87 93.31 45.57 49.78 69.73 126.24 153.38 100.80 122.11 71.40 102.04 92.11 50.36 42.10 61.72 36.19 52.66 43.56 45 E8a_E9a KnownJunction 0 95.87 113.01 63.72 68.96 122.41 80.58 149.05 37.13 53.73 79.08 151.51 165.80 93.66 134.91 90.24 102.28 87.52 47.17 36.52 85.39 50.66 53.58 25.18 46 E9_Aa NovelBoundary 0 6.59 3.35 2.96 0.00 0.00 0.00 6.05 5.75 2.89 0.00 2.68 0.00 20.45 0.00 0.00 0.00 7.48 0.00 0.00 2.81 0.00 0.00 0.00 47 ER9a ExonRegion 0 32.23 49.08 21.55 23.55 40.49 25.16 36.82 21.94 19.24 30.54 28.88 36.73 23.71 25.80 31.40 17.62 17.07 10.10 11.85 20.70 6.63 22.54 8.68