Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AMOTL2 Gene 0 65.32 116.00 60.48 45.97 42.41 61.13 38.79 29.07 36.61 69.22 0.00 0.22 0.00 0.26 0.08 0.18 0.07 94.53 10.53 83.37 36.32 32.98 21.73 2 453204 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 249883 Transcript 0 32.15 94.66 55.58 39.91 11.28 73.72 31.61 13.43 32.92 62.37 0.00 0.00 0.00 0.00 0.00 3.66 0.00 114.46 10.71 77.77 39.80 28.93 39.89 4 422605 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 ER1a ExonRegion 0 3.87 8.42 7.68 4.53 3.01 21.55 7.47 0.59 6.07 9.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.73 3.64 20.61 14.13 8.09 6.37 6 E1a_E2a KnownJunction 0 0.00 0.00 11.56 8.79 3.14 10.22 2.08 2.09 15.08 17.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.02 0.00 41.99 13.41 17.57 4.35 7 ER2a ExonRegion 0 5.84 16.99 28.62 17.01 6.79 25.65 11.34 16.16 25.01 54.08 0.00 0.46 0.00 0.17 0.26 0.00 0.00 87.80 7.20 66.83 35.36 15.76 16.57 8 E2a_E3a KnownJunction 0 20.97 42.16 42.96 20.64 4.33 45.77 14.09 24.89 18.08 40.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 127.59 9.51 56.57 53.93 26.02 19.63 9 ER3a ExonRegion 0 11.51 44.04 47.43 29.23 18.62 35.82 20.61 13.29 28.18 52.80 0.00 0.00 0.00 0.33 0.00 0.99 0.00 98.35 5.87 82.81 38.95 24.31 15.30 10 E3a_E4a KnownJunction 0 40.53 74.33 65.93 54.51 4.33 55.76 23.94 24.60 39.70 67.53 0.00 0.00 0.00 5.47 0.00 0.00 0.00 121.00 9.22 116.39 35.77 43.54 37.30 11 ER4a ExonRegion 0 18.54 67.08 60.93 36.30 22.18 55.09 34.57 26.87 53.75 66.85 0.00 0.00 0.00 1.08 0.00 0.00 0.00 127.71 4.15 90.64 42.62 32.10 23.84 12 E4a_E5a KnownJunction 0 13.48 65.38 55.14 48.18 43.89 51.28 32.95 32.65 43.20 68.90 0.00 0.00 0.00 5.12 0.00 0.00 0.00 162.00 0.00 79.00 40.90 21.49 55.74 13 ER5a ExonRegion 0 20.12 59.70 47.09 38.16 24.02 28.00 16.23 27.34 42.39 58.41 0.00 0.00 0.00 0.49 0.00 0.00 0.00 105.54 7.33 84.05 41.04 25.65 30.57 14 E5a_E6a KnownJunction 0 9.93 74.00 28.27 24.44 17.57 34.53 23.98 26.86 46.41 41.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 95.72 0.00 68.84 35.77 17.51 28.51 15 ER6a ExonRegion 0 11.55 43.70 35.23 18.19 16.14 43.35 26.31 19.35 23.71 44.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75.25 7.03 69.44 37.42 21.51 17.93 16 E6a_E7a KnownJunction 0 17.56 50.45 71.14 28.37 3.57 51.67 28.09 21.36 32.38 62.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 129.42 0.00 75.81 41.58 31.54 29.79 17 ER7a ExonRegion 0 30.00 59.03 78.94 47.79 18.77 55.59 28.85 24.25 43.41 88.25 0.00 0.00 0.00 0.39 0.00 0.00 0.00 142.10 7.72 112.00 55.54 36.79 24.44 18 E7a_E8a KnownJunction 0 53.64 85.12 95.86 86.87 8.66 76.94 36.66 33.80 65.22 116.04 0.00 0.00 0.00 4.94 0.00 0.00 0.00 147.70 17.69 134.87 66.10 42.43 42.60 19 ER8a ExonRegion 0 29.09 79.67 70.83 46.41 24.29 58.55 33.16 24.09 46.33 95.66 0.00 0.00 0.00 0.96 0.00 1.05 0.00 144.20 11.86 113.90 56.37 33.41 31.98 20 E8a_E9a KnownJunction 0 38.90 99.85 53.87 41.65 10.53 75.01 31.44 14.33 36.81 62.24 0.00 0.00 0.00 0.00 0.00 4.36 0.00 109.27 11.86 73.63 36.63 30.25 42.34 21 E8a_E9b KnownJunction 0 3.19 0.00 1.21 4.89 3.40 5.00 8.21 4.68 1.56 22.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.77 0.00 22.18 0.00 5.39 0.00 22 ER9a ExonRegion 0 25.40 89.48 57.29 38.16 12.04 72.44 31.78 12.53 29.03 62.51 0.00 0.00 0.00 0.00 0.00 2.97 0.00 119.64 9.56 81.91 42.97 27.61 37.44 23 ER9b ExonRegion 0 38.28 62.13 65.84 47.02 15.40 57.40 32.61 29.33 44.77 75.79 0.00 0.00 0.00 0.00 0.00 0.36 0.00 144.85 11.22 110.13 49.96 35.60 30.11 24 E9_Da NovelBoundary 0 19.63 36.11 34.18 22.41 10.78 24.08 22.17 22.14 18.84 38.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.98 12.14 41.93 47.07 7.78 21.68 25 E9b_E10a KnownJunction 0 26.89 64.86 74.33 39.69 21.90 65.02 37.19 32.78 37.33 89.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 77.89 0.00 104.95 62.15 34.90 15.79 26 ER9c ExonRegion 0 24.42 58.04 68.06 31.03 19.35 50.92 28.41 33.77 35.44 71.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51.59 9.80 91.33 66.11 25.64 22.14 27 ER10a ExonRegion 0 118.46 196.20 77.39 65.48 72.59 84.73 57.93 40.40 42.37 80.12 0.00 0.30 0.00 0.23 0.09 0.13 0.14 88.56 13.98 87.63 32.29 43.13 23.78