Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-723O4.1 Gene 0 6.01 7.41 12.47 7.68 9.28 8.41 7.56 7.85 6.96 16.70 7.52 11.71 11.34 12.12 12.13 16.24 9.02 18.75 12.50 14.16 3.55 1.90 4.11 2 498297 Transcript 0 6.18 0.73 9.14 5.85 17.90 7.17 4.30 5.89 2.42 13.40 8.90 16.01 19.48 11.85 11.25 19.71 5.92 18.64 7.32 6.43 2.89 1.94 3.64 3 480931 Transcript 0 3.36 10.08 5.69 4.23 3.15 8.89 7.66 7.86 3.94 11.96 0.00 4.63 0.00 2.37 4.55 5.91 1.58 7.64 6.49 6.65 1.19 1.80 2.67 4 448668 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 IG33 Intergenic 0 1.88 1.38 4.25 5.24 8.90 2.18 7.80 4.49 2.97 7.15 7.56 26.86 25.06 11.64 6.62 12.66 6.85 7.20 5.40 10.21 2.23 1.58 2.93 6 IG33_SR4 SilentIntergenicRegion 0 1.62 1.08 2.42 3.18 2.54 0.73 5.66 3.69 2.65 2.56 4.75 27.73 20.31 13.26 4.00 9.54 7.73 6.01 1.69 6.93 2.19 0.00 1.56 7 IG33_AR3 ActiveIntergenicRegion 0 0.85 0.89 1.78 3.45 10.54 0.28 11.10 0.61 1.87 6.09 9.50 47.07 32.17 7.82 4.14 6.06 8.60 5.79 1.87 10.18 1.29 1.90 0.86 8 IG33_SR3 SilentIntergenicRegion 0 1.41 1.26 4.33 3.01 6.51 2.69 8.67 3.42 2.42 6.44 6.07 28.51 26.75 11.73 6.00 13.21 6.01 4.50 5.17 10.29 1.36 2.39 2.50 9 IG33_AR1 ActiveIntergenicRegion 0 4.21 3.08 10.38 17.52 23.09 5.56 10.92 13.67 7.50 17.98 15.57 33.68 42.84 19.96 15.97 23.38 10.33 19.24 14.20 16.74 4.39 2.37 7.79 10 ER1a ExonRegion 0 11.14 3.30 5.80 9.11 11.58 5.89 7.23 10.13 2.57 9.22 6.65 13.91 24.67 13.80 14.85 18.32 9.92 10.21 7.91 7.86 4.76 3.85 5.45 11 E1_Da NovelBoundary 0 13.48 2.63 10.17 22.54 7.98 0.00 5.74 6.74 7.52 4.67 0.00 7.65 7.14 9.18 8.90 3.25 0.00 7.67 4.80 6.26 0.00 7.90 8.71 12 E1a_E2a KnownJunction 0 6.89 0.00 5.44 2.06 20.29 7.55 3.71 1.68 0.00 8.35 4.74 7.65 48.54 8.48 4.45 23.58 0.00 14.01 4.33 2.49 2.90 0.00 3.84 13 ER2a ExonRegion 0 3.72 1.09 10.51 10.26 11.84 6.50 6.88 10.51 4.23 15.83 6.11 14.38 17.45 11.07 9.56 17.72 8.01 24.23 12.10 9.70 4.55 2.12 1.58 14 E2_Da NovelBoundary 0 3.41 9.80 5.29 9.86 16.21 7.38 3.44 3.94 4.51 10.64 2.21 0.00 0.00 2.41 0.00 8.46 0.00 8.58 23.06 5.24 0.00 2.88 4.01 15 E2a_E3a KnownJunction 0 3.33 0.00 11.03 5.49 23.17 8.35 0.00 1.56 2.89 10.50 14.00 24.01 12.66 9.42 11.74 11.79 0.00 21.64 3.58 0.00 0.00 4.53 4.35 16 ER3a ExonRegion 0 5.21 0.00 13.83 8.15 13.43 7.32 4.07 11.44 3.14 19.19 12.13 23.49 7.22 14.37 13.45 23.01 8.82 27.42 16.01 12.92 2.87 1.16 6.63 17 E3_Da NovelBoundary 0 0.00 6.45 7.48 18.28 3.90 5.22 12.32 5.87 10.01 20.25 2.21 0.00 0.00 3.00 0.00 8.72 0.00 23.79 17.60 0.00 8.15 0.00 3.93 18 E3a_E4c KnownJunction 0 6.82 0.00 8.22 0.00 27.08 7.44 3.89 0.00 1.71 17.33 9.79 12.60 6.33 13.95 13.47 23.84 8.79 14.34 0.00 5.62 2.29 0.00 0.00 19 I3_SR1 SilentIntronRegion 0 2.10 2.92 2.62 8.26 3.84 2.02 4.20 2.27 1.63 10.68 1.07 2.36 3.78 1.50 2.84 3.94 1.82 11.10 13.01 6.05 1.70 1.84 2.92 20 ER4a ExonRegion 0 3.36 10.08 5.69 4.23 3.15 8.89 7.66 7.86 3.94 11.96 0.00 4.63 0.00 2.37 4.55 5.91 1.58 7.64 6.49 6.65 1.19 1.80 2.67 21 E4_Ab KnownBoundary 0 3.11 3.29 1.60 1.63 4.33 0.00 8.48 0.00 2.75 3.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.42 2.62 3.03 3.00 0.00 22 E4_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER4b ExonRegion 0 6.35 6.10 12.87 8.86 13.38 13.75 11.92 1.73 3.09 25.23 4.83 8.66 2.35 10.56 5.80 20.80 9.90 21.25 6.37 17.02 4.41 2.08 8.81 24 ER4c ExonRegion 0 6.16 5.46 15.95 11.64 8.09 8.07 4.79 6.61 7.57 28.23 11.06 13.81 6.21 14.67 12.38 21.48 7.97 29.21 10.55 18.19 0.98 2.13 4.64 25 E4a_E5a KnownJunction 0 6.22 0.00 24.25 10.35 12.56 24.53 6.40 4.64 9.58 28.45 2.47 6.15 0.00 8.30 4.45 7.26 9.54 9.87 0.00 17.90 0.00 0.00 0.00 26 ER5a ExonRegion 0 5.91 11.68 17.17 7.06 9.16 9.46 9.11 6.49 11.64 19.78 7.61 6.41 8.52 13.38 13.05 17.83 11.60 20.36 15.92 18.98 5.20 1.56 3.89 27 E5_Da KnownBoundary 0 14.00 5.53 22.97 7.69 8.57 21.07 10.33 8.79 11.00 20.17 16.74 6.30 11.69 14.30 27.32 11.71 9.44 12.31 22.31 29.91 3.15 3.12 3.59 28 ER5b ExonRegion 0 5.24 12.71 14.23 4.55 8.13 11.07 9.46 4.91 9.26 13.31 9.67 13.66 11.69 13.08 14.49 10.46 10.65 15.65 15.38 18.75 2.64 0.67 4.64 29 IG32_SR2 SilentIntergenicRegion 0 11.77 32.60 21.19 11.11 12.11 14.46 8.79 12.92 16.83 24.25 6.66 7.46 16.26 11.31 13.68 25.18 6.45 16.18 20.44 20.24 3.28 2.59 5.16 30 IG32_AR1 ActiveIntergenicRegion 0 26.17 52.90 28.29 18.45 29.12 14.43 15.41 10.24 20.08 31.92 18.59 34.47 68.60 15.13 24.27 23.11 11.66 11.19 18.69 30.02 2.57 6.57 4.41