Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC137695.1 Gene 0 6.56 5.19 9.74 5.46 7.40 7.81 8.39 9.14 9.50 10.09 1.21 2.10 2.81 3.02 5.87 6.00 4.40 14.09 30.43 9.97 4.54 7.56 6.91 2 383461 Transcript 0 9.11 6.12 14.29 8.62 9.61 5.67 4.32 10.35 8.39 13.11 1.38 0.58 0.63 2.03 4.17 6.02 2.97 12.49 25.60 10.43 8.69 9.37 5.40 3 IG44 Intergenic 0 12.35 12.91 25.41 8.69 16.98 11.90 14.40 15.76 8.35 21.55 3.51 0.83 0.44 6.71 5.45 10.44 3.74 34.88 40.25 17.79 14.92 11.16 10.65 4 IG44_AR1 ActiveIntergenicRegion 0 3.38 3.28 13.46 3.29 4.68 5.73 6.06 7.26 4.13 13.50 3.63 0.90 0.30 5.06 4.02 9.22 2.84 26.61 17.22 11.31 10.03 7.22 9.91 5 IG44_AR2 ActiveIntergenicRegion 0 17.51 18.43 32.28 11.79 24.04 15.44 19.20 20.65 10.77 26.18 3.45 0.79 0.52 7.67 6.28 11.16 4.26 39.67 53.49 21.52 17.73 13.43 11.09 6 ER1a ExonRegion 0 22.67 14.02 37.49 16.22 17.62 10.94 11.78 22.04 12.88 31.65 3.60 0.89 0.96 6.65 10.83 17.01 3.64 31.78 48.45 22.56 16.96 18.65 10.23 7 E1_Da NovelBoundary 0 10.00 3.35 7.84 4.76 0.00 11.53 12.63 18.40 9.23 10.93 0.00 0.00 0.00 2.65 0.00 0.00 0.00 20.77 35.11 8.82 6.18 8.70 0.00 8 E1a_E2a KnownJunction 0 0.00 6.45 18.15 13.19 16.72 2.27 1.68 5.91 5.03 26.11 2.68 0.00 0.00 0.00 0.00 0.00 4.77 18.94 16.00 17.13 19.34 8.08 0.00 9 E2_Aa NovelBoundary 0 17.48 0.00 11.32 5.89 3.99 4.77 1.81 10.76 4.57 6.50 2.68 0.00 0.00 2.41 0.00 0.00 0.00 8.83 16.57 2.49 2.66 2.82 4.35 10 ER2a ExonRegion 0 14.48 10.85 15.05 9.21 10.14 10.67 3.01 14.12 9.59 9.11 1.57 0.00 0.00 3.45 1.65 5.29 6.32 16.36 50.53 11.80 10.32 9.72 9.21 11 E2_Da NovelBoundary 0 16.30 18.35 16.06 12.92 7.47 4.43 18.81 20.04 16.03 12.03 2.42 0.00 0.00 4.65 5.69 31.70 0.00 29.72 26.64 6.01 13.90 14.63 8.71 12 E2a_E3a KnownJunction 0 13.71 5.26 6.68 5.69 9.76 2.27 0.00 6.37 7.41 5.96 0.00 0.00 0.00 0.00 4.82 4.02 0.00 2.53 8.75 6.39 2.97 8.94 3.76 13 I2 Intron 0 3.40 1.58 2.06 1.33 3.73 3.33 4.30 1.95 2.43 3.83 0.27 0.64 0.41 0.56 0.51 2.94 0.23 5.12 15.62 4.58 2.02 3.49 2.95 14 I2_SR1 SilentIntronRegion 0 3.40 1.58 2.06 1.33 3.73 3.33 4.30 1.95 2.43 3.83 0.27 0.64 0.41 0.56 0.51 2.94 0.23 5.12 15.62 4.58 2.02 3.49 2.95 15 E3_Aa NovelBoundary 0 6.52 3.29 5.26 1.27 3.23 8.35 6.67 5.59 7.32 5.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.63 0.00 9.72 3.15 10.72 0.00 16 ER3a ExonRegion 0 8.56 1.77 12.78 10.50 6.68 5.93 5.03 12.71 11.93 9.35 0.77 0.71 0.00 1.26 6.35 7.56 1.32 4.38 22.55 5.97 5.17 11.17 8.31 17 E3_Da NovelBoundary 0 10.22 3.35 25.66 11.39 3.57 5.45 6.40 6.24 2.46 8.92 5.05 0.00 0.00 0.00 5.93 0.00 3.83 12.73 18.17 6.01 11.12 3.12 4.35 18 E3a_E4a KnownJunction 0 0.00 0.00 3.55 1.93 0.00 0.00 0.00 4.11 3.01 1.50 0.00 0.00 0.00 0.00 0.00 3.50 0.00 0.00 4.24 0.00 3.15 3.12 0.00 19 I3 Intron 0 4.12 2.16 4.37 2.34 6.16 4.55 4.81 3.42 3.59 5.90 0.00 0.32 0.00 1.51 1.87 2.11 0.29 7.57 24.54 5.84 2.15 5.53 3.12 20 I3_AR1 ActiveIntronRegion 0 5.98 3.09 5.65 6.85 8.17 3.59 6.81 4.38 3.57 10.58 0.00 0.00 0.00 3.38 5.42 3.05 0.00 4.16 36.91 3.83 2.53 5.67 4.39 21 I3_SR1 SilentIntronRegion 0 6.12 1.75 6.65 2.80 9.47 5.42 4.41 3.50 3.73 7.22 0.00 0.00 0.00 0.76 1.22 2.25 0.02 10.25 28.29 7.51 3.40 6.76 2.01 22 I3_AR2 ActiveIntronRegion 0 2.97 2.99 3.01 0.86 2.75 2.59 4.02 2.62 4.49 1.98 0.00 1.67 0.00 4.17 1.92 4.72 1.51 6.95 26.53 4.10 1.76 7.11 5.50 23 I3_SR2 SilentIntronRegion 0 1.79 1.78 2.06 0.84 3.62 5.16 4.96 3.46 2.92 4.87 0.00 0.00 0.00 0.00 1.15 0.00 0.00 6.34 14.15 5.85 0.80 3.17 2.48 24 E4_Aa NovelBoundary 0 6.45 0.00 17.33 5.49 3.65 7.55 4.24 12.86 3.24 12.11 0.00 0.00 0.00 0.00 0.00 13.07 4.68 19.61 17.32 6.39 0.00 0.00 0.00 25 ER4a ExonRegion 0 4.33 4.46 6.34 3.58 6.34 7.59 8.72 7.18 8.85 8.07 1.01 2.49 3.48 2.85 5.51 4.74 4.77 13.43 28.67 9.12 2.95 5.90 6.30 26 IG45_SR1 SilentIntergenicRegion 0 1.04 1.44 2.41 1.65 5.49 5.84 3.43 2.27 4.58 5.14 0.00 0.11 0.00 0.05 0.18 0.09 0.20 5.91 20.27 3.52 1.85 1.48 1.43 27 IG45_AR1 ActiveIntergenicRegion 0 3.00 3.94 4.14 2.20 11.00 14.43 10.15 9.23 7.53 8.20 0.00 0.00 0.00 0.00 0.00 1.35 0.60 15.54 45.33 6.84 3.39 1.95 5.53 28 IG45_SR2 SilentIntergenicRegion 0 0.49 3.26 1.93 2.90 8.60 11.71 6.59 7.59 6.49 8.22 0.00 0.00 0.00 0.07 0.16 0.74 0.00 9.42 26.44 2.90 1.76 2.41 2.27 29 IG45_AR2 ActiveIntergenicRegion 0 1.32 2.68 0.91 2.53 6.40 17.14 7.40 4.62 4.48 6.66 0.00 0.00 0.00 0.00 0.00 0.66 0.00 2.34 22.41 3.28 0.49 2.07 1.30 30 IG45_AR3 ActiveIntergenicRegion 0 6.35 0.00 0.00 4.09 13.38 1.83 2.65 3.46 3.71 5.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 15.93 2.13 4.41 2.08 2.94 31 IG45_AR4 ActiveIntergenicRegion 0 2.53 0.57 6.37 3.18 11.81 2.75 2.29 1.87 3.90 4.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 13.12 1.64 1.42 1.53 0.88 32 IG45_AR6 ActiveIntergenicRegion 0 8.79 5.07 9.71 8.59 16.15 9.14 10.15 10.47 15.45 14.48 2.25 4.27 2.98 2.33 5.32 8.39 2.19 18.62 12.72 11.71 6.71 5.88 10.28 33 IG45_SR6 SilentIntergenicRegion 0 23.26 15.04 7.14 6.43 25.25 15.59 18.54 7.65 11.91 19.69 2.96 16.46 13.19 3.94 11.15 4.30 7.01 3.75 21.27 10.33 0.00 5.53 5.45 34 IG45_AR7 ActiveIntergenicRegion 0 26.24 22.00 23.92 24.51 30.60 18.66 15.97 21.14 14.49 30.50 14.56 13.36 7.01 13.69 16.66 23.67 11.64 31.45 24.87 18.29 15.53 11.24 19.41 35 IG45_SR7 SilentIntergenicRegion 0 18.42 15.24 18.32 12.76 19.40 8.86 10.24 14.31 7.11 13.84 7.48 7.17 5.53 10.37 11.22 17.24 5.98 23.10 13.48 9.77 6.66 6.29 14.91 36 IG45_SR8 SilentIntergenicRegion 0 7.41 9.08 0.00 0.00 18.59 6.52 2.36 0.00 0.00 0.00 8.66 3.25 9.97 3.65 11.81 18.68 0.00 0.00 14.39 9.42 0.00 5.47 7.81