Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZDHHC23 Gene 0 14.32 18.93 7.32 2.22 7.04 20.03 4.67 3.77 5.67 8.61 13.23 24.14 16.67 16.46 4.24 2.57 1.27 0.03 0.46 2.65 1.45 4.99 1.99 2 393809 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 383674 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 330212 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 498275 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 478793 Transcript 0 0.00 1.68 0.00 0.00 6.41 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 1.18 0.00 0.00 3.88 7 491556 Transcript 0 0.00 1.38 0.00 0.00 0.00 1.04 0.04 0.00 0.19 0.19 0.55 0.00 0.03 2.20 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.21 8 488129 Transcript 0 4.68 7.62 2.35 0.66 2.65 8.53 2.32 2.06 2.60 4.20 2.97 13.12 9.36 8.49 1.33 1.64 0.69 0.20 0.27 1.21 0.83 2.68 0.61 9 496083 Transcript 0 0.47 0.00 0.00 0.00 1.76 0.81 0.58 0.00 0.20 0.00 0.00 0.39 1.79 0.00 0.00 0.64 0.00 0.00 0.00 0.47 0.00 0.00 0.00 10 ER1a ExonRegion 0 0.00 0.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.28 0.00 0.00 0.00 0.00 0.00 0.00 1.50 0.00 1.17 11 E1_Ab KnownBoundary 0 0.00 3.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.37 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.35 12 ER1b ExonRegion 0 0.00 0.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.73 0.00 0.00 0.42 0.00 0.00 0.00 0.00 0.00 0.00 2.50 0.00 0.69 13 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.61 4.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1c ExonRegion 0 0.35 0.27 0.00 0.00 2.26 0.99 0.00 0.00 1.62 0.72 5.35 0.00 2.95 6.04 0.00 0.00 0.00 0.00 0.00 2.51 1.86 0.84 0.41 15 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E1b_E2b KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 1.39 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 4.35 17 E1b_E2c KnownJunction 0 3.78 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 2.37 0.00 0.00 4.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER1d ExonRegion 0 2.12 2.03 0.00 0.00 0.00 5.50 0.00 0.00 2.47 0.00 3.87 0.00 4.69 6.90 0.00 0.00 0.00 0.00 0.00 2.13 0.00 1.04 2.94 19 ER2a ExonRegion 0 0.00 1.38 0.00 0.00 0.00 1.04 0.04 0.00 0.19 0.19 0.55 0.00 0.03 2.20 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.21 20 E2_Ab KnownBoundary 0 0.00 6.31 0.00 0.00 0.00 0.00 0.00 0.00 1.62 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.59 21 ER2b ExonRegion 0 0.00 2.63 0.00 0.00 0.00 0.92 1.32 0.00 3.19 1.10 0.89 0.00 0.29 2.67 0.00 0.00 0.00 0.00 0.00 0.22 0.00 0.00 5.14 22 E2_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.78 0.00 0.00 2.72 0.00 4.53 0.00 0.00 7.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.01 23 E2a_E2d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER2c ExonRegion 0 0.04 1.29 0.00 0.00 0.00 8.13 2.65 0.00 3.71 0.00 4.32 3.03 0.00 4.52 0.00 0.00 0.00 0.00 0.00 0.78 1.14 0.52 1.71 25 E2_Ac KnownBoundary 0 0.00 3.35 0.00 0.00 0.00 14.31 3.93 0.00 2.81 0.00 0.00 0.00 0.00 4.94 0.00 0.00 0.00 0.00 0.00 3.26 3.15 2.76 0.00 26 E2_Ad KnownBoundary 0 0.00 3.09 0.00 0.00 4.33 2.73 0.00 0.00 2.69 1.05 13.95 12.30 12.82 10.12 0.00 0.00 4.39 0.00 0.00 0.00 0.00 0.00 0.00 27 ER2d ExonRegion 0 2.12 3.83 0.00 0.00 2.16 11.57 1.53 0.00 2.61 0.49 8.48 3.66 4.51 12.06 0.00 0.00 2.16 0.00 0.00 2.13 1.70 2.32 0.00 28 ER2e ExonRegion 0 1.51 1.66 0.02 0.00 3.39 7.94 1.42 1.14 5.11 3.65 18.92 16.74 13.84 17.07 0.00 0.71 0.78 0.00 0.00 3.87 2.03 6.51 2.09 29 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.90 0.00 2.01 4.80 4.67 16.90 6.30 6.82 16.72 0.00 4.10 0.00 0.00 0.00 5.24 3.15 3.12 0.00 30 ER3a ExonRegion 0 1.13 5.07 3.44 0.73 2.52 11.88 1.91 1.28 6.42 2.12 21.32 23.59 16.54 22.23 1.97 2.86 1.19 0.00 0.57 3.93 1.13 7.05 1.36 31 E3_Da KnownBoundary 0 6.00 0.00 9.17 0.00 11.46 2.90 0.00 0.00 6.37 0.00 19.11 26.56 6.82 14.19 0.00 0.00 0.00 0.00 0.00 2.94 3.15 8.82 8.71 32 ER3b ExonRegion 0 3.18 2.77 1.86 0.38 1.43 11.44 1.74 0.61 5.24 4.56 18.75 16.72 5.01 22.38 3.61 2.85 2.24 0.00 0.38 3.28 2.89 5.22 1.90 33 E3b_E4a KnownJunction 0 3.78 3.03 0.00 2.06 11.29 10.33 0.00 0.00 1.62 6.37 19.32 0.00 0.00 19.78 0.00 0.00 13.18 0.00 0.00 2.75 3.15 2.94 0.00 34 E4_Aa NovelBoundary 0 6.45 5.92 5.68 1.53 0.00 9.77 2.12 3.86 1.48 5.67 0.00 0.00 8.28 12.36 4.45 3.59 0.00 0.00 0.00 3.00 2.78 0.00 4.35 35 ER4a ExonRegion 0 8.16 5.57 3.48 1.85 2.47 10.14 3.14 0.58 4.66 7.67 27.04 11.70 15.72 25.42 3.45 4.46 3.32 0.00 0.00 2.65 4.39 6.05 6.24 36 E4_Da NovelBoundary 0 3.63 6.71 0.00 0.00 0.00 0.00 2.08 3.90 0.00 0.00 0.00 0.00 0.00 9.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 E4a_E6a KnownJunction 0 13.71 3.09 3.90 2.06 3.99 10.39 5.17 4.48 6.16 4.32 16.06 24.01 19.48 24.02 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 38 ER5a ExonRegion 0 0.39 1.12 2.01 0.00 1.96 0.37 0.97 0.47 1.01 1.87 0.00 1.96 0.71 2.69 0.38 0.00 0.00 0.00 0.00 0.39 0.81 0.00 0.54 39 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER6a ExonRegion 0 5.52 10.72 3.40 0.52 3.84 14.65 2.52 1.80 4.03 3.96 28.26 21.98 8.82 24.91 5.83 0.06 0.97 0.00 0.00 2.54 1.08 3.99 1.47 41 E6_Ab KnownBoundary 0 18.60 9.67 5.32 0.00 15.20 25.95 1.81 0.00 1.77 3.92 28.95 26.56 7.14 27.02 0.00 0.00 4.77 0.00 0.00 3.26 6.05 3.12 3.16 42 ER6b ExonRegion 0 4.18 4.96 2.74 1.62 4.97 15.15 3.92 2.00 1.01 3.44 16.22 32.32 19.15 22.95 2.11 6.30 0.94 0.00 0.00 3.47 3.52 4.54 7.31 43 E6_Da KnownBoundary 0 3.11 2.50 1.15 1.86 6.62 2.61 8.21 4.52 0.00 4.62 2.68 19.21 14.61 14.30 6.30 3.76 0.00 0.00 0.00 2.56 3.15 0.00 0.00 44 E6a_E6d KnownJunction 0 0.00 8.42 0.00 0.00 0.00 5.00 0.00 0.00 1.74 1.26 14.74 12.30 0.00 7.00 0.00 3.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E6a_E6e KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 E6a_E6f NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 ER6c ExonRegion 0 4.42 6.80 1.50 0.89 2.61 6.70 2.40 3.73 1.79 2.94 2.83 16.73 6.96 14.13 2.22 4.54 1.32 1.22 0.00 1.60 2.63 3.22 0.78 49 ER6d ExonRegion 1 2.12 6.51 2.45 0.14 0.00 6.05 2.65 1.73 6.18 5.73 0.77 18.62 14.07 13.48 2.61 0.00 3.30 0.00 0.00 0.00 0.00 1.88 0.00 50 ER6e ExonRegion 1 5.82 8.77 4.04 0.80 2.63 16.61 4.88 3.49 5.07 7.25 2.68 20.95 21.83 13.48 2.33 1.94 0.57 0.00 0.21 1.11 0.96 6.35 0.58 51 E6_Ad KnownBoundary 1 19.11 2.57 4.64 0.00 16.72 42.59 1.90 2.55 7.44 5.45 0.00 37.51 20.29 12.13 0.00 0.00 4.49 0.00 0.00 0.00 2.90 3.06 0.00 52 ER6f ExonRegion 0 11.83 12.39 3.79 0.00 12.89 29.34 3.31 5.19 4.94 8.03 16.34 29.72 17.69 15.72 0.00 5.54 3.30 0.00 0.00 0.00 1.50 1.70 0.00 53 ER6g ExonRegion 1 10.29 9.24 3.57 0.48 5.35 21.01 9.01 5.19 6.37 13.22 7.77 23.17 26.99 10.94 1.58 7.87 1.10 0.00 0.50 1.46 0.85 7.64 2.11 54 E6_Dd KnownBoundary 1 18.00 6.45 3.10 1.70 0.00 42.42 14.57 4.52 11.05 18.83 14.53 42.16 88.47 27.78 4.45 0.00 7.67 0.00 3.76 2.75 3.15 12.37 0.00 55 E6d_E6f KnownJunction 0 0.00 0.00 0.00 0.00 12.82 0.00 0.00 0.00 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.41 56 ER6h ExonRegion 0 13.67 22.00 4.92 1.36 6.77 25.85 5.32 3.62 7.04 12.79 12.30 39.09 25.95 19.75 3.02 2.57 2.23 0.00 0.12 4.17 0.58 6.52 1.74 57 E6_Ae KnownBoundary 1 38.23 58.54 18.30 0.00 17.32 36.06 9.89 4.35 10.62 12.01 7.63 82.68 13.64 9.77 4.45 0.00 0.00 0.00 0.00 2.81 2.41 5.33 0.00 58 ER6i ExonRegion 0 25.61 44.49 14.24 4.03 13.02 33.69 11.74 7.40 7.72 14.03 16.91 45.06 17.04 25.09 5.47 4.32 1.52 0.00 0.00 3.32 4.00 9.73 2.72 59 E6_Af KnownBoundary 0 37.27 73.67 8.57 6.83 10.95 27.65 3.93 5.87 4.46 16.71 9.58 25.36 20.62 27.67 4.45 8.63 4.49 0.00 0.00 2.36 0.00 8.21 0.00 60 ER6j ExonRegion 0 19.69 34.23 13.33 3.67 9.97 43.23 8.69 9.02 6.94 16.93 23.05 27.50 17.78 24.66 6.63 5.50 1.93 0.00 0.86 5.11 1.41 11.05 3.52 61 E6_De KnownBoundary 0 44.08 30.52 12.15 5.53 10.95 78.42 10.51 13.47 12.47 12.14 32.01 25.36 45.94 41.62 14.22 0.00 0.00 0.00 7.72 16.87 2.84 2.51 0.00 62 ER6k ExonRegion 0 36.61 41.37 18.42 6.00 16.30 35.68 7.70 7.46 9.61 14.99 23.40 36.48 26.13 21.87 10.48 3.37 1.52 0.00 1.13 3.44 1.67 5.39 3.42 63 E6_Df KnownBoundary 0 3.04 0.00 0.00 4.00 0.00 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 E6_Dg KnownBoundary 0 0.00 2.70 1.71 2.06 0.00 0.00 0.00 2.34 1.62 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 ER6l ExonRegion 0 17.99 4.07 1.23 4.09 3.34 7.34 0.00 3.46 2.47 2.29 0.00 4.33 4.69 0.00 5.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 ER6m ExonRegion 0 3.76 7.02 1.62 0.88 1.93 1.64 0.35 1.06 0.69 0.37 0.00 0.00 0.69 0.89 0.02 0.79 0.00 0.00 1.28 0.00 0.00 0.00 0.00 67 I6_AR2 ActiveIntronRegion 0 12.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 E7_Aa NovelBoundary 0 136.39 19.40 33.20 14.75 36.08 23.40 24.07 13.10 25.81 8.81 27.11 18.61 33.93 30.14 20.89 8.54 17.86 0.00 13.55 5.82 17.17 16.35 23.65 69 ER7a ExonRegion 0 0.93 0.00 0.00 0.00 3.53 1.61 1.16 0.00 0.40 0.00 0.00 0.78 3.58 0.00 0.00 1.28 0.00 0.00 0.00 0.94 0.00 0.00 0.00