Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIAA2018 Gene 0 15.09 14.39 6.59 10.52 15.08 7.26 11.20 8.92 13.55 11.60 14.85 35.21 39.99 22.84 10.82 20.41 23.11 16.55 9.29 24.23 13.04 20.24 18.01 2 491165 Transcript 0 0.00 5.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 316407 Transcript 0 1.15 0.80 0.08 0.06 0.10 0.03 0.12 0.00 0.18 0.13 0.06 0.26 0.06 0.13 0.22 0.07 0.00 0.08 0.05 0.13 0.03 0.05 0.04 4 478658 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 496826 Transcript 0 6.69 10.96 3.48 5.19 1.99 1.60 4.44 0.84 1.79 0.78 3.68 4.19 6.66 1.26 0.84 2.11 1.06 1.19 0.31 3.02 0.43 0.54 0.66 6 IG37 Intergenic 0 8.55 9.39 8.90 14.97 15.25 6.51 10.13 4.03 5.08 10.87 3.15 23.63 7.93 10.83 8.32 3.77 4.40 4.16 5.09 9.34 2.74 10.82 6.41 7 IG37_AR19 ActiveIntergenicRegion 0 10.64 13.33 10.49 23.89 28.11 15.15 17.00 5.78 10.74 21.48 6.59 64.00 19.13 22.83 10.86 5.87 10.37 7.36 7.14 18.52 4.75 23.20 10.02 8 IG37_AR15 ActiveIntergenicRegion 0 10.90 5.79 3.84 8.38 8.55 5.54 8.55 0.00 2.01 5.91 5.76 8.00 2.96 22.31 13.37 6.01 5.53 5.42 15.10 14.66 2.59 12.59 10.09 9 IG37_AR14 ActiveIntergenicRegion 0 11.71 13.74 11.67 21.89 26.59 11.14 21.76 3.05 12.02 22.10 10.68 19.46 11.20 33.37 12.97 8.90 18.22 15.15 19.22 22.02 9.44 24.68 18.80 10 IG37_AR13 ActiveIntergenicRegion 0 21.02 17.05 16.89 18.24 12.02 2.03 14.98 4.97 12.37 26.79 9.93 19.45 12.14 27.25 11.76 10.91 18.36 8.86 13.09 21.89 9.18 23.97 9.01 11 IG37_AR12 ActiveIntergenicRegion 0 15.17 12.62 13.64 17.47 30.18 5.23 10.20 5.12 10.22 30.69 6.19 16.04 15.03 24.72 25.52 7.76 9.11 7.32 16.58 24.07 2.29 24.96 12.89 12 IG37_AR11 ActiveIntergenicRegion 0 15.29 5.65 10.76 13.78 27.65 3.67 8.68 3.26 10.43 29.18 10.52 42.81 17.20 12.09 28.37 8.59 9.90 5.54 7.79 14.89 6.61 30.33 14.03 13 IG37_AR10 ActiveIntergenicRegion 0 21.77 3.63 11.20 17.04 40.01 7.07 11.51 10.12 10.67 24.44 7.32 53.60 11.73 12.10 8.08 10.69 13.68 8.89 10.16 14.89 6.19 25.45 14.26 14 IG37_AR9 ActiveIntergenicRegion 0 11.93 6.10 17.49 17.59 30.89 18.00 22.51 17.28 8.87 22.63 3.87 37.78 16.20 25.10 4.75 16.75 10.20 12.26 10.42 23.40 4.41 17.99 6.67 15 IG37_AR8 ActiveIntergenicRegion 0 9.93 12.05 21.30 20.97 23.26 14.95 28.82 17.68 9.79 23.91 1.49 38.97 18.76 24.74 10.27 22.86 8.38 13.50 13.23 21.77 4.92 21.00 11.29 16 IG37_SR6 SilentIntergenicRegion 0 10.28 15.69 20.48 23.95 22.17 17.29 30.07 13.83 11.12 33.59 5.52 44.53 8.71 32.02 8.70 18.68 13.20 12.93 15.02 19.15 3.46 23.22 12.59 17 IG37_AR7 ActiveIntergenicRegion 0 15.19 16.51 21.91 19.96 22.04 12.08 25.70 12.91 9.95 39.40 7.05 60.10 4.97 27.42 12.97 18.53 11.26 12.28 19.86 15.39 6.22 26.60 19.00 18 IG37_AR6 ActiveIntergenicRegion 0 18.34 16.78 22.36 17.49 19.85 14.98 23.50 9.94 10.40 38.80 9.50 61.33 6.25 28.02 10.64 14.12 14.58 9.85 24.69 13.12 15.24 30.73 24.72 19 IG37_SR5 SilentIntergenicRegion 0 19.40 12.20 15.32 15.67 13.82 11.61 16.99 6.91 8.65 33.26 8.38 49.79 15.63 30.05 13.54 17.83 17.60 9.24 28.14 21.63 17.63 29.17 25.94 20 IG37_AR5 ActiveIntergenicRegion 0 16.70 9.04 12.80 12.11 13.38 8.97 16.03 6.34 7.69 29.18 6.23 45.22 18.24 29.05 19.99 16.18 13.57 8.83 23.36 19.39 17.14 26.16 21.54 21 IG37_SR4 SilentIntergenicRegion 0 4.23 2.37 4.90 1.59 3.46 1.22 6.01 3.46 1.44 9.37 1.77 13.71 6.25 8.32 5.08 6.56 6.19 2.77 7.96 10.20 5.51 3.91 4.53 22 IG37_AR4 ActiveIntergenicRegion 0 14.92 22.72 19.79 34.71 32.21 10.61 17.17 7.54 9.80 22.73 5.27 34.01 15.70 17.79 20.91 4.54 4.61 4.78 8.26 16.98 3.95 24.66 14.25 23 IG37_SR3 SilentIntergenicRegion 0 13.75 12.62 12.12 24.00 23.75 11.83 13.59 3.62 6.04 10.38 3.32 23.91 8.95 16.48 10.98 7.00 5.09 6.52 8.70 13.34 4.50 14.30 11.24 24 IG37_AR3 ActiveIntergenicRegion 0 19.50 15.11 23.03 33.45 19.81 15.53 23.48 8.79 8.90 24.94 4.12 30.61 19.56 15.94 17.07 5.33 10.32 9.67 10.66 16.22 4.75 16.11 15.07 25 IG37_AR2 ActiveIntergenicRegion 0 17.26 13.97 15.79 24.26 28.61 10.94 16.17 10.95 9.22 13.42 1.05 34.47 16.03 18.30 10.11 5.19 2.72 3.44 4.84 11.41 2.59 13.72 5.25 26 IG37_AR1 ActiveIntergenicRegion 0 1.23 0.88 1.75 2.43 3.18 0.00 2.80 0.87 0.26 0.30 2.07 18.37 0.00 1.61 2.87 0.58 0.65 0.86 0.00 0.76 0.43 0.68 0.57 27 ER1a ExonRegion 0 5.19 1.89 0.67 1.84 0.51 0.69 2.20 0.47 3.80 3.83 3.45 1.33 8.25 8.84 4.04 2.49 6.38 3.56 2.38 8.60 7.41 2.60 3.53 28 E1a_E2a KnownJunction 0 3.41 0.00 4.76 11.12 0.00 0.00 0.00 1.81 9.92 10.05 4.26 6.30 14.61 18.60 4.45 7.86 4.39 10.53 0.00 24.10 5.75 6.18 4.35 29 E1a_E3a NovelJunction 0 3.78 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 14.42 4.45 12.30 0.00 0.00 0.00 0.00 0.00 2.57 0.00 30 E2_Aa NovelBoundary 0 10.22 6.38 0.00 3.96 6.88 0.00 3.44 0.00 4.95 0.00 4.95 0.00 0.00 0.00 0.00 7.26 0.00 3.86 0.00 0.00 11.92 2.69 4.35 31 ER2a ExonRegion 0 23.10 13.36 13.76 18.11 12.92 3.48 16.39 5.57 11.05 9.79 20.51 41.88 37.56 28.88 8.30 16.45 28.66 12.71 6.29 28.80 16.81 12.86 12.56 32 E2_Da NovelBoundary 0 13.93 2.57 1.83 3.06 7.64 0.00 6.62 4.97 1.74 4.70 2.63 0.00 6.66 2.12 0.00 7.69 4.68 6.88 12.52 8.82 0.00 0.00 11.01 33 E2a_E3a KnownJunction 0 10.37 12.43 21.88 14.65 11.29 4.54 18.42 8.26 13.48 9.91 33.75 18.61 76.29 44.79 4.45 11.45 25.90 20.89 8.09 23.01 9.27 31.54 7.43 34 ER3a ExonRegion 0 35.46 16.64 15.12 20.28 22.44 13.91 19.23 12.58 13.74 13.13 31.85 43.69 73.96 40.10 13.12 12.76 31.49 12.22 11.27 41.64 20.88 23.66 16.45 35 E3_Da NovelBoundary 0 20.45 13.75 0.00 7.16 14.52 5.56 8.04 0.00 3.15 6.10 4.79 6.30 6.01 0.00 0.00 11.11 0.00 0.00 4.42 2.56 0.00 0.00 0.00 36 E3a_E4a KnownJunction 0 61.57 18.42 14.52 17.65 39.64 10.56 22.83 11.75 7.03 15.15 21.64 65.72 40.26 63.45 30.90 12.48 39.36 1.87 13.65 27.48 20.20 24.00 18.35 37 E4a_E5b KnownJunction 0 27.71 3.35 6.53 10.95 37.61 14.37 11.22 9.12 6.74 7.33 12.48 33.61 97.07 29.78 28.56 16.41 26.93 3.61 14.12 34.52 8.96 14.33 16.73 38 ER4a ExonRegion 0 36.78 10.59 13.01 15.79 29.62 13.47 13.10 9.42 8.73 10.95 18.33 50.16 59.35 44.52 23.81 17.01 31.30 2.55 13.95 33.90 17.02 17.60 17.52 39 I4 Intron 0 27.48 17.77 7.12 11.70 14.81 3.45 8.00 5.29 4.91 4.80 1.74 7.14 13.18 1.42 6.69 8.85 6.12 1.73 7.07 7.41 1.79 4.22 4.37 40 I4_SR1 SilentIntronRegion 0 27.51 17.79 7.13 11.71 14.83 3.46 8.01 5.29 4.92 4.81 1.74 7.15 13.20 1.42 6.70 8.86 6.13 1.74 7.08 7.42 1.80 4.22 4.38 41 E5_Aa NovelBoundary 0 29.78 6.71 8.90 12.35 21.48 7.55 16.61 7.27 4.92 7.12 2.68 0.00 6.82 2.35 13.97 8.37 0.00 1.58 0.00 9.20 2.84 3.12 4.18 42 E5_Ab NovelBoundary 0 30.60 40.98 10.14 22.27 7.81 2.90 20.14 1.64 8.10 2.74 5.37 12.60 15.91 0.00 0.00 3.85 4.02 1.74 0.00 5.88 0.00 2.76 0.00 43 ER5a ExonRegion 0 6.69 10.96 3.48 5.19 1.99 1.60 4.44 0.84 1.79 0.78 3.68 4.19 6.66 1.26 0.84 2.11 1.06 1.19 0.31 3.02 0.43 0.54 0.66 44 ER5b ExonRegion 0 24.26 20.98 15.35 32.39 11.58 4.85 8.25 11.61 16.92 15.32 29.68 62.83 99.29 45.99 21.48 24.65 35.10 10.07 13.95 34.98 9.11 33.29 23.89 45 E5_Da NovelBoundary 0 23.26 34.66 7.60 19.15 3.90 0.00 6.09 8.67 10.42 8.33 5.00 6.30 6.82 7.18 13.35 22.99 13.46 0.00 9.41 5.75 0.00 0.00 11.52 46 E5a_E6a KnownJunction 1 6.52 6.45 9.76 17.55 17.06 0.00 8.92 3.57 22.77 17.35 29.85 58.52 40.26 68.69 8.90 12.82 24.40 12.64 4.52 37.90 13.59 28.11 19.04 47 I5 Intron 0 16.34 8.67 6.60 14.74 14.95 3.17 5.97 5.70 5.91 6.46 1.56 7.03 9.76 1.88 6.41 6.90 4.19 3.87 4.30 6.89 1.43 4.89 3.41 48 I5_SR1 SilentIntronRegion 0 17.60 10.59 9.93 19.04 17.23 4.83 9.50 13.01 9.54 14.33 1.49 11.82 17.00 2.45 7.44 8.20 5.08 2.97 3.40 11.30 1.00 10.80 4.37 49 I5_AR1 ActiveIntronRegion 0 15.71 14.83 5.34 13.87 17.32 4.38 6.20 8.86 10.50 7.32 1.16 6.31 20.44 1.09 3.31 4.19 2.63 1.67 3.88 7.01 0.00 7.67 2.54 50 I5_SR2 SilentIntronRegion 0 16.16 7.00 6.00 13.83 13.93 2.51 5.03 3.23 4.11 4.28 1.66 5.96 5.85 1.89 6.75 7.10 4.26 4.53 4.61 5.75 1.81 2.85 3.33 51 E6_Aa NovelBoundary 0 17.26 6.05 10.23 8.72 24.36 7.89 19.70 2.38 8.94 6.34 0.00 6.30 36.69 4.59 0.00 16.15 4.77 0.00 0.00 14.32 0.00 2.33 4.10 52 ER6a ExonRegion 0 15.64 13.08 10.41 18.32 13.54 4.73 14.47 5.76 20.56 18.42 25.33 77.44 83.70 30.88 14.12 16.73 33.59 9.30 17.93 34.06 11.77 28.74 24.95 53 E6a_E7a KnownJunction 0 11.34 15.00 7.07 27.14 11.80 2.10 12.41 13.72 23.76 21.25 33.32 115.69 67.37 39.56 6.30 24.87 22.07 6.76 24.75 54.01 5.31 27.13 16.39 54 E6a_E7b KnownJunction 0 0.00 5.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 E7_Aa NovelBoundary 0 19.86 6.45 0.00 8.92 21.14 0.00 0.00 1.52 0.00 4.16 0.00 24.76 16.07 4.94 0.00 4.36 4.77 0.00 0.00 5.94 0.00 2.45 0.00 56 ER7a ExonRegion 0 9.69 11.74 4.28 8.20 9.00 6.52 11.47 7.94 16.46 11.48 20.77 49.62 58.37 32.65 11.22 29.83 34.04 26.03 13.84 35.04 20.05 24.17 26.61 57 E7_Da KnownBoundary 0 0.00 5.79 0.00 7.09 3.74 0.00 0.00 0.00 1.79 3.92 2.21 0.00 0.00 7.65 0.00 4.36 0.00 0.00 0.00 0.00 0.00 11.76 0.00 58 ER7b ExonRegion 0 1.15 0.80 0.08 0.06 0.10 0.03 0.12 0.00 0.18 0.13 0.06 0.26 0.06 0.13 0.22 0.07 0.00 0.08 0.05 0.13 0.03 0.05 0.04 59 E7_Ab KnownBoundary 0 34.23 32.69 1.12 0.00 15.62 10.79 11.97 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.00 0.00 4.77 4.64 0.00 0.00 3.09 0.00 4.35 60 ER7c ExonRegion 0 77.05 62.88 33.89 46.59 86.57 29.67 36.28 36.94 29.92 39.92 15.54 37.10 28.41 20.14 33.67 19.36 16.78 6.03 5.99 20.44 4.91 47.94 14.31 61 IG36 Intergenic 0 10.90 2.87 0.33 2.73 5.36 0.57 1.59 1.50 1.50 0.64 0.80 5.72 7.01 2.60 6.71 9.03 1.88 0.33 0.37 2.70 0.34 0.78 0.87 62 IG36_SR2 SilentIntergenicRegion 0 12.75 3.21 0.32 2.74 5.74 0.58 1.35 1.80 1.44 0.69 0.77 4.96 7.51 2.33 7.07 7.01 1.98 0.45 0.50 2.27 0.19 0.74 0.97 63 IG36_AR2 ActiveIntergenicRegion 0 14.11 5.89 0.00 1.61 0.00 0.00 1.22 0.00 2.66 0.74 3.47 3.33 0.00 7.75 0.60 6.33 2.88 0.00 0.00 5.95 0.34 1.50 0.00 64 IG36_AR1 ActiveIntergenicRegion 0 5.39 1.77 0.64 2.64 6.70 0.58 2.75 0.54 2.01 0.65 0.76 7.60 6.68 3.86 7.42 18.06 2.28 0.00 0.00 2.81 1.38 0.79 0.61