Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CNBP Gene 0 397.65 416.20 279.71 270.38 306.63 215.19 246.25 150.09 109.31 229.85 435.02 288.13 242.13 467.85 424.41 320.96 316.33 260.70 247.98 248.22 264.14 297.10 219.98 2 451728 Transcript 1 66.38 201.81 304.51 223.98 309.08 247.02 309.98 123.84 101.45 178.71 510.39 215.92 234.08 339.34 314.85 199.69 420.29 203.37 211.11 247.36 269.23 208.07 146.82 3 446936 Transcript 1 73.42 191.54 563.82 493.48 149.75 74.96 72.38 327.65 252.92 491.14 704.86 351.71 430.98 1226.03 1052.85 1169.35 463.02 899.91 644.07 807.08 545.12 1090.02 796.69 4 441626 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 422453 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 393290 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 307433 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 IG40_SR2 SilentIntergenicRegion 0 4.91 5.86 4.65 9.72 13.28 2.09 9.11 5.58 4.09 8.84 1.04 23.48 9.59 5.50 8.28 7.20 4.41 4.06 3.01 6.34 1.21 0.70 1.48 9 IG40_AR1 ActiveIntergenicRegion 0 4.16 4.40 4.13 6.59 7.89 2.34 6.37 6.33 2.89 4.87 4.37 10.91 2.28 11.21 11.54 12.85 14.27 9.30 3.76 7.11 9.08 1.02 2.60 10 ER1a ExonRegion 1 512.59 417.72 220.94 175.36 617.35 747.97 541.96 117.87 98.28 236.23 676.30 29.29 26.45 614.10 575.70 625.74 499.16 574.21 400.05 372.95 467.23 423.53 435.57 11 E1a_E2a KnownJunction 1 126.24 226.74 242.19 102.92 100.34 136.51 79.27 59.06 64.00 194.96 338.61 81.03 112.01 230.03 177.64 140.13 273.59 270.23 151.53 187.53 267.87 108.51 116.09 12 I1_AR3 ActiveIntronRegion 0 207.64 32.43 22.65 29.07 67.26 3.00 38.60 21.99 12.07 18.31 12.66 56.43 54.50 5.10 34.21 41.15 25.84 13.54 47.45 44.68 8.13 9.66 46.78 13 I1_AR6 ActiveIntronRegion 0 26.17 10.31 12.73 30.24 31.46 8.16 22.52 26.57 11.70 23.59 28.55 55.24 72.31 6.39 31.97 21.72 22.03 11.41 13.66 21.28 8.75 22.49 18.66 14 E2_Ab NovelBoundary 1 166.62 159.77 174.98 108.71 153.06 182.05 130.46 68.96 62.41 185.45 582.99 118.54 52.11 262.99 295.07 137.91 370.83 147.41 129.23 221.66 463.27 110.47 117.89 15 ER2a ExonRegion 1 140.25 215.02 248.26 123.02 148.24 188.27 121.27 80.66 90.16 235.65 591.72 115.74 79.11 315.73 253.57 184.47 426.48 273.96 167.55 260.85 482.17 140.98 153.68 16 ER2b ExonRegion 1 183.02 160.61 612.35 494.50 206.16 161.64 127.79 301.89 264.42 591.77 1405.69 228.23 237.17 1203.38 1174.58 780.85 1125.41 673.83 564.56 824.57 1115.60 732.34 568.87 17 E2_Da NovelBoundary 0 66.83 60.12 363.65 391.89 71.31 20.61 26.67 185.61 169.01 343.51 347.09 106.68 112.33 805.70 915.76 645.56 394.39 412.30 443.68 399.35 229.38 776.62 542.23 18 E2a_E3a KnownJunction 1 73.42 191.54 563.82 493.48 149.75 74.96 72.38 327.65 252.92 491.14 704.86 351.71 430.98 1226.03 1052.85 1169.35 463.02 899.91 644.07 807.08 545.12 1090.02 796.69 19 E2b_E3a KnownJunction 0 27.26 119.85 411.10 395.02 92.36 31.69 22.83 218.14 177.66 398.69 531.13 288.39 298.19 736.30 814.76 783.64 418.61 547.64 621.66 369.63 294.18 625.62 609.83 20 ER2c ExonRegion 0 41.22 89.09 386.52 375.51 71.48 23.58 26.73 211.45 176.92 378.59 460.12 201.01 230.03 848.72 925.50 733.69 429.90 512.44 566.99 392.20 286.90 718.91 583.27 21 ER3a ExonRegion 0 308.19 674.45 966.70 812.98 813.86 461.55 447.40 470.83 364.15 785.22 1569.37 716.32 546.51 1517.49 1401.65 1104.38 1085.60 1109.46 948.96 931.96 1010.86 928.85 786.45 22 E3_Da NovelBoundary 0 111.95 48.02 29.18 91.46 141.51 127.71 96.63 55.41 22.71 63.34 35.85 69.47 45.45 41.20 61.07 58.87 46.94 42.32 27.01 24.99 36.45 78.56 75.03 23 E3a_E4a KnownJunction 0 3.04 26.84 11.71 16.02 24.11 16.24 27.16 15.28 12.99 5.45 33.01 16.51 6.49 55.09 25.59 22.81 8.42 18.36 33.70 26.08 21.87 8.02 24.33 24 E3a_E4b KnownJunction 1 66.38 201.81 304.51 223.98 309.08 247.02 309.98 123.84 101.45 178.71 510.39 215.92 234.08 339.34 314.85 199.69 420.29 203.37 211.11 247.36 269.23 208.07 146.82 25 E3a_E4c KnownJunction 1 252.12 742.96 1021.96 842.32 1094.14 950.99 947.69 417.11 308.01 758.53 1501.91 575.74 440.72 1033.85 830.71 401.01 1020.85 647.83 518.98 638.85 947.91 543.20 326.60 26 I3 Intron 0 170.58 44.17 25.87 44.76 55.60 24.26 41.26 30.82 15.07 27.44 34.68 33.35 30.57 31.19 37.50 49.59 33.25 28.07 23.06 32.15 32.59 63.62 38.83 27 I3_AR1 ActiveIntronRegion 0 172.68 44.68 26.19 45.29 56.27 24.55 41.77 31.21 15.25 27.78 35.11 33.77 30.95 31.56 37.95 50.21 33.65 28.42 23.35 32.55 33.00 64.42 39.26 28 E4_Aa NovelBoundary 0 199.07 41.97 18.45 31.23 36.93 17.26 18.95 33.89 12.12 27.16 32.64 12.45 20.29 5.47 19.90 24.78 8.13 16.54 0.00 45.57 25.33 31.66 37.56 29 ER4a ExonRegion 0 35.98 70.16 79.96 67.12 111.04 85.73 99.96 51.42 36.13 56.49 189.91 60.61 59.80 138.86 108.80 85.45 112.23 87.31 84.41 105.32 111.29 79.17 62.40 30 ER4b ExonRegion 1 174.26 435.19 571.84 453.84 760.80 830.71 671.69 273.10 195.15 416.33 1156.52 331.93 312.67 724.36 614.10 395.29 747.10 477.34 444.89 514.18 669.93 429.90 316.18 31 ER4c ExonRegion 0 912.76 1354.76 1366.86 1237.36 1101.14 1017.40 945.64 728.58 516.58 1121.30 2653.77 953.82 905.29 2339.68 2048.40 1551.86 1702.01 1380.00 1281.29 1283.59 1560.05 1423.79 1007.06 32 E4a_E5a KnownJunction 0 1489.08 1803.30 1239.13 1178.50 1204.58 540.94 828.05 698.30 579.91 1159.15 2790.60 1056.94 838.74 2186.07 1772.67 1159.70 1715.47 970.30 1143.66 1153.90 1559.63 1213.95 820.85 33 ER5a ExonRegion 0 917.52 873.82 414.83 440.09 530.39 282.62 431.94 216.89 153.68 316.03 455.64 596.06 488.43 641.18 564.18 400.91 358.20 272.42 302.88 281.18 243.09 406.85 270.65 34 E5_Da KnownBoundary 1 116.09 100.51 82.70 100.75 154.84 28.62 72.91 101.74 44.47 110.70 44.12 148.70 86.52 27.37 104.21 52.21 46.47 25.04 46.87 86.54 14.58 79.42 38.33 35 ER5b ExonRegion 0 11.84 15.40 10.02 12.59 13.22 6.33 8.15 14.50 9.11 12.47 5.69 21.85 13.56 9.85 18.92 12.65 8.70 8.44 10.58 14.25 4.46 12.19 12.24 36 IG39 Intergenic 0 11.73 26.90 11.11 32.91 22.29 8.60 10.70 17.37 10.43 14.61 1.81 5.19 3.80 1.90 5.97 3.61 2.28 7.12 10.63 15.23 1.09 3.10 7.65 37 IG39_SR3 SilentIntergenicRegion 0 16.96 39.49 15.28 47.91 32.70 12.22 15.38 25.13 15.36 20.60 1.13 4.88 5.07 2.04 6.80 4.52 2.34 9.00 15.05 20.80 1.51 4.68 9.93