Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CD200R1 Gene 0 22.03 0.24 1.38 3.69 11.85 4.96 14.52 4.54 7.62 1.16 0.38 7.10 4.07 20.57 3.33 80.39 105.50 0.29 0.29 0.19 0.00 1.58 0.27 2 308611 Transcript 0 1.90 0.00 0.00 0.61 0.00 0.00 3.51 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 15.31 21.79 0.00 0.00 0.00 0.00 0.00 0.00 3 295863 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 0.00 4 471858 Transcript 0 30.93 0.14 0.97 2.76 7.90 2.75 17.21 2.97 4.82 0.89 0.27 3.93 1.88 6.03 1.56 27.64 28.39 0.19 0.66 0.29 0.00 1.49 0.51 5 440122 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 490004 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ER1a ExonRegion 0 1.90 0.00 0.00 0.61 0.00 0.00 3.51 0.00 0.00 0.00 0.00 0.00 0.00 1.22 0.00 15.31 21.79 0.00 0.00 0.00 0.00 0.00 0.00 8 E1_Ac KnownBoundary 0 6.59 0.00 1.42 1.70 6.88 4.60 9.01 0.00 3.30 0.00 0.00 11.40 0.00 29.96 4.45 111.25 149.98 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 4.07 0.00 0.00 1.36 4.73 3.81 5.60 0.93 0.48 0.00 0.00 6.66 0.00 18.61 2.01 76.13 92.17 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1c ExonRegion 0 7.63 0.80 1.57 0.81 9.12 4.45 16.73 4.30 5.33 0.56 0.00 5.23 0.00 22.76 1.37 153.38 232.51 0.00 0.00 0.00 0.00 1.79 0.84 11 E1_Ad KnownBoundary 1 3.78 3.22 0.00 3.13 4.07 0.00 20.23 1.52 8.30 1.10 0.00 5.85 0.00 32.14 5.19 109.37 362.79 0.00 0.00 0.00 0.00 2.27 0.00 12 ER1d ExonRegion 0 1.40 0.54 1.54 2.24 5.48 4.35 8.16 6.06 9.84 0.62 0.00 6.40 3.26 42.40 2.23 248.36 248.22 0.00 0.00 0.00 0.00 2.55 1.24 13 E1a_E2a KnownJunction 0 0.00 0.00 0.00 1.80 8.32 2.90 3.97 4.11 6.68 0.00 0.00 12.15 0.00 23.37 0.00 103.39 108.27 0.00 0.00 0.00 0.00 0.00 0.00 14 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 3.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 12.30 36.37 0.00 0.00 0.00 0.00 0.00 0.00 15 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2a ExonRegion 0 0.00 0.00 0.34 4.31 13.11 8.61 9.59 1.53 6.35 0.00 0.00 11.55 0.00 24.53 2.82 106.78 170.88 0.00 0.00 0.00 0.00 0.09 0.00 17 E2a_E3a KnownJunction 1 0.00 0.00 1.48 4.86 14.69 5.62 8.74 2.22 9.06 0.00 0.00 0.00 0.00 27.14 4.45 64.43 215.33 0.00 0.00 0.00 0.00 0.00 0.00 18 E3_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 4.07 0.00 21.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 0 9.88 0.00 1.32 3.41 12.73 11.53 6.44 1.44 10.95 0.82 0.00 6.10 1.14 40.92 0.48 129.92 256.62 0.00 0.00 0.00 0.00 1.67 0.00 20 E3a_E4a KnownJunction 0 20.08 0.00 1.33 5.86 0.00 9.09 4.06 0.00 10.71 2.93 0.00 0.00 6.82 33.85 0.00 118.35 232.35 0.00 0.00 0.00 0.00 0.00 0.00 21 ER4a ExonRegion 0 6.28 0.65 0.82 3.95 8.15 5.60 11.34 1.23 7.86 2.23 0.62 9.24 2.88 38.81 5.13 143.48 250.38 1.32 0.00 0.34 0.00 0.48 0.00 22 E4_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 1.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.04 0.00 0.00 0.00 0.00 0.00 0.00 23 E4a_E4b KnownJunction 0 22.52 0.00 0.00 3.40 0.00 5.68 6.62 4.19 6.45 1.37 0.00 20.26 15.10 48.80 0.00 153.12 248.71 0.00 0.00 0.00 0.00 5.14 0.00 24 ER4b ExonRegion 0 0.13 0.00 0.80 0.02 2.17 0.06 18.37 0.03 0.04 0.01 0.00 0.10 1.97 0.34 0.02 3.44 6.05 0.00 0.00 0.00 0.00 0.03 0.00 25 E4_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER4c ExonRegion 0 12.10 0.00 1.23 1.75 11.62 6.36 8.52 5.35 4.94 0.38 0.00 7.00 1.83 50.73 3.06 172.99 209.83 0.96 0.00 0.00 0.00 1.11 0.00 27 E4_Db KnownBoundary 0 15.85 0.00 0.00 3.60 15.96 12.61 17.93 5.71 7.58 1.61 0.00 12.45 0.00 34.61 4.45 166.62 137.17 0.00 0.00 0.00 0.00 0.00 0.00 28 ER4d ExonRegion 0 7.18 0.00 1.50 1.80 7.76 4.30 5.76 6.05 7.23 1.23 0.00 3.52 4.14 33.25 3.84 149.57 168.51 0.00 0.00 0.00 0.00 2.08 0.00 29 E4_Dc NovelBoundary 1 3.78 0.00 0.00 0.00 0.00 0.00 12.67 0.00 1.30 0.00 0.00 0.00 0.00 18.95 0.00 12.99 65.26 0.00 0.00 0.00 0.00 0.00 0.00 30 E4c_E5a KnownJunction 0 2.96 0.00 1.71 3.43 8.66 8.35 4.06 2.22 5.64 3.33 0.00 0.00 0.00 30.78 0.00 161.41 135.48 0.00 0.00 0.00 0.00 0.00 0.00 31 E4c_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.54 0.00 0.00 0.00 0.00 0.00 0.00 32 I4 Intron 0 2.31 0.08 1.30 0.31 2.11 1.10 6.72 0.19 1.52 0.26 0.22 2.91 0.73 4.50 0.26 22.68 27.17 0.21 0.00 0.24 0.08 0.63 0.00 33 I4_AR1 ActiveIntronRegion 0 3.23 0.00 2.38 0.48 2.84 0.90 8.62 0.00 2.84 0.41 0.46 2.96 0.46 6.76 0.00 26.17 35.46 0.33 0.00 0.00 0.26 0.49 0.00 34 I4_SR2 SilentIntronRegion 0 4.06 0.00 2.00 0.56 2.96 2.48 8.89 0.71 0.51 0.47 0.26 4.40 0.53 5.14 0.96 29.98 32.65 0.38 0.00 0.00 0.00 1.43 0.00 35 E5_Aa NovelBoundary 0 3.19 0.00 0.00 3.70 0.00 0.00 25.35 4.93 2.72 1.13 0.00 12.15 0.00 2.18 0.00 23.07 8.60 0.00 0.00 0.00 0.00 0.00 0.00 36 ER5a ExonRegion 0 20.41 0.00 0.30 3.85 13.72 3.13 10.07 2.81 9.04 2.78 0.90 4.21 6.15 36.70 2.79 165.35 164.17 0.00 0.00 1.00 0.00 0.97 0.00 37 E5_Da NovelBoundary 0 10.00 0.00 1.24 5.93 0.00 0.00 18.77 4.23 0.00 0.00 0.00 0.00 6.82 7.36 4.45 16.41 39.36 0.00 0.00 0.00 0.00 0.00 0.00 38 E5a_E6a KnownJunction 0 34.38 0.00 0.00 1.70 12.82 2.90 0.00 0.00 4.75 3.12 0.00 7.65 12.66 26.96 8.90 115.53 116.41 0.00 0.00 0.00 0.00 0.00 0.00 39 I5 Intron 0 7.36 0.00 1.23 1.77 2.84 2.48 14.58 1.99 0.71 0.33 0.75 0.98 3.81 5.55 1.62 14.93 32.20 0.00 0.00 0.41 0.00 0.20 0.00 40 I5_SR1 SilentIntronRegion 0 4.20 0.00 0.77 0.61 2.24 1.90 12.20 1.49 0.35 0.48 0.80 1.04 3.31 5.41 0.73 18.04 40.64 0.00 0.00 0.59 0.00 0.00 0.00 41 I5_AR1 ActiveIntronRegion 0 8.47 0.00 1.40 1.36 0.00 1.83 14.00 1.73 1.24 0.00 3.87 4.33 4.69 9.74 4.56 25.48 41.50 0.00 0.00 0.00 0.00 0.00 0.00 42 I5_AR2 ActiveIntronRegion 0 9.08 0.00 1.49 2.41 3.25 2.82 15.93 2.27 0.90 0.26 0.64 0.88 4.08 5.53 2.03 13.01 27.47 0.00 0.00 0.32 0.00 0.32 0.00 43 E6_Aa NovelBoundary 0 10.52 0.00 3.61 1.80 14.86 0.00 38.95 0.00 1.79 0.99 0.00 6.30 12.34 7.30 8.90 14.70 25.06 0.00 0.00 0.00 0.00 0.00 0.00 44 ER6a ExonRegion 0 27.97 0.04 0.99 3.11 2.56 7.81 0.00 0.04 12.32 1.35 0.00 3.11 10.09 30.01 6.12 99.24 164.54 0.00 0.00 0.00 0.00 0.00 0.00 45 E6_Da NovelBoundary 0 7.33 0.00 5.20 0.00 3.82 0.00 19.12 2.55 1.74 0.00 0.00 0.00 0.00 2.47 0.00 0.00 13.28 0.00 0.00 0.00 0.00 0.00 0.00 46 E6a_E7a KnownJunction 0 48.01 0.00 1.83 3.93 0.00 13.57 0.00 0.00 17.77 0.00 0.00 0.00 13.64 33.96 11.74 138.85 220.10 0.00 0.00 0.00 0.00 0.00 0.00 47 I6_SR1 SilentIntronRegion 0 5.81 0.00 3.10 0.93 3.06 4.19 9.01 0.20 2.30 0.00 0.00 0.82 1.77 3.52 0.00 8.84 22.45 0.00 0.00 0.00 0.00 0.48 0.00 48 E7_Aa NovelBoundary 0 10.37 0.00 0.00 0.00 8.66 0.00 14.97 0.00 4.17 0.00 0.00 0.00 0.00 0.00 0.00 12.22 41.98 0.00 0.00 0.00 0.00 0.00 0.00 49 ER7a ExonRegion 0 30.51 0.37 1.91 7.31 22.21 8.60 15.68 9.34 12.80 1.26 0.97 12.90 10.02 29.43 6.02 93.20 128.89 0.35 0.20 0.13 0.00 2.85 0.00 50 E7_Da KnownBoundary 0 20.15 0.00 5.74 7.26 15.20 9.20 29.06 14.21 16.64 2.26 0.00 15.00 0.00 23.96 6.06 50.84 26.65 0.00 0.00 0.00 0.00 2.63 0.00 51 ER7b ExonRegion 0 17.27 0.03 3.58 3.81 18.38 5.80 14.95 6.50 11.44 2.42 0.00 11.78 5.08 17.16 6.58 45.53 32.95 0.00 0.00 0.00 0.00 0.88 0.00 52 E7_Db KnownBoundary 0 9.85 0.00 1.77 3.30 6.88 6.64 11.88 2.55 4.83 0.00 0.00 17.71 6.33 4.53 0.00 11.36 20.66 0.00 0.00 0.00 0.00 2.63 0.00 53 ER7c ExonRegion 0 30.93 0.14 0.97 2.76 7.90 2.75 17.21 2.97 4.82 0.89 0.27 3.93 1.88 6.03 1.56 27.64 28.39 0.19 0.66 0.29 0.00 1.49 0.51