Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATG3 Gene 0 59.39 20.86 38.07 26.73 47.70 35.20 29.92 29.53 27.86 34.80 81.21 84.12 88.73 71.53 92.38 64.91 67.96 20.77 16.70 22.96 28.17 47.28 29.90 2 492886 Transcript 0 0.00 0.00 1.98 1.02 0.00 3.16 6.82 3.37 2.78 1.38 4.87 0.00 0.08 0.41 0.07 0.90 0.00 4.03 0.00 0.35 2.77 0.33 1.24 3 283290 Transcript 0 2.12 0.00 0.00 1.36 2.68 0.00 2.65 0.00 0.00 0.00 0.00 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 495756 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 402314 Transcript 0 0.82 0.61 0.23 0.35 0.39 1.02 0.85 0.36 0.28 0.41 1.05 0.57 0.67 1.22 1.25 0.88 0.58 0.12 0.17 0.23 0.13 0.22 0.07 6 488910 Transcript 0 0.45 0.56 0.00 1.96 2.70 1.57 1.99 2.41 3.54 1.83 2.74 8.57 4.00 4.23 1.34 5.73 5.64 1.18 1.00 2.32 2.79 2.07 1.91 7 496423 Transcript 0 0.00 2.43 0.00 0.00 6.45 0.00 1.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.33 0.00 8 465980 Transcript 0 1.67 2.95 0.08 4.15 1.77 2.60 4.36 1.17 1.89 0.15 5.92 16.27 0.91 6.44 2.29 3.55 5.16 0.00 0.00 2.44 0.00 5.14 3.74 9 467275 Transcript 0 7.63 2.38 7.65 3.68 8.35 2.52 4.36 4.90 6.30 1.64 5.85 9.14 11.43 1.89 2.94 3.16 2.77 0.85 1.27 1.46 0.29 8.35 2.43 10 494571 Transcript 0 10.14 1.77 6.19 3.36 7.31 2.59 5.10 3.27 3.08 4.37 4.01 11.10 17.50 6.92 9.30 9.79 6.36 0.54 1.41 2.86 4.12 4.01 2.17 11 ER1a ExonRegion 0 0.00 0.00 2.76 0.00 0.00 3.75 0.00 0.00 0.00 0.00 2.78 0.00 0.17 0.81 0.14 1.80 0.00 1.34 0.00 0.71 5.54 0.67 2.48 12 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 8.29 0.00 0.00 0.00 0.00 4.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 10.56 3.06 4.27 13 ER1b ExonRegion 0 2.33 4.28 4.21 0.91 4.87 9.45 2.99 1.29 1.24 2.85 17.84 0.00 4.69 13.03 17.18 15.70 10.83 9.00 4.49 6.71 26.67 13.14 16.42 14 E1_Ac KnownBoundary 0 0.00 6.58 0.00 0.00 8.40 2.38 0.00 0.00 0.00 0.00 10.37 0.00 0.00 4.71 12.61 13.07 9.54 2.45 0.00 3.26 7.78 5.02 0.00 15 E1_Ad KnownBoundary 0 10.37 9.08 9.40 3.40 14.09 21.98 20.89 9.94 7.26 12.68 30.90 0.00 0.00 27.78 63.17 48.28 28.99 28.81 16.75 8.56 29.04 37.23 62.32 16 ER1c ExonRegion 1 17.20 14.74 9.96 3.75 17.06 31.86 24.82 3.67 6.33 13.48 53.40 0.00 0.00 55.22 97.55 63.90 40.02 41.81 23.89 14.63 63.36 35.94 67.18 17 ER1d ExonRegion 1 78.20 41.02 27.71 14.69 26.35 106.24 79.44 30.94 26.10 43.43 205.12 5.72 11.05 144.24 180.57 210.06 147.92 179.54 69.59 63.72 170.40 73.91 203.67 18 E1_Ae KnownBoundary 1 57.94 25.00 32.82 15.52 12.56 22.26 43.72 36.80 31.22 47.65 180.41 0.00 0.00 60.10 49.57 115.87 147.08 187.16 42.64 38.80 69.99 35.64 90.06 19 E1_Da KnownBoundary 0 0.00 0.00 5.50 4.13 4.33 17.15 6.76 7.43 3.59 9.91 39.48 0.00 12.66 7.36 11.50 60.50 33.19 49.37 9.60 19.56 25.02 6.00 12.98 20 E1a_E2a KnownJunction 0 0.00 0.00 1.21 2.03 0.00 2.56 13.65 6.74 5.56 2.77 6.95 0.00 0.00 0.00 0.00 0.00 0.00 6.72 0.00 0.00 0.00 0.00 0.00 21 ER1e ExonRegion 1 30.40 12.39 26.40 18.34 6.81 30.01 32.86 34.73 29.53 46.50 145.32 4.33 20.47 62.16 45.63 125.91 131.74 212.32 39.09 39.65 83.14 31.25 65.41 22 ER1f ExonRegion 1 5.66 3.44 24.02 7.64 4.52 14.31 6.10 12.85 12.98 28.81 111.51 7.92 18.40 66.48 82.48 89.04 98.75 73.18 31.62 27.60 82.58 41.18 60.70 23 E1_Af KnownBoundary 1 25.49 19.93 18.80 10.62 33.53 54.34 29.15 26.04 6.68 26.00 42.91 0.00 13.47 92.24 114.84 162.09 64.61 74.04 16.38 33.43 43.18 27.98 75.63 24 E1_Ag KnownBoundary 1 97.20 21.84 42.78 25.17 91.34 100.79 24.86 18.85 20.11 40.59 101.18 12.30 6.82 84.23 109.28 198.49 166.25 81.12 47.15 37.07 61.28 43.35 61.21 25 ER1g ExonRegion 1 57.70 21.19 38.63 18.51 73.23 88.60 26.55 25.29 16.84 50.34 89.73 10.25 10.86 131.21 122.01 206.33 140.72 78.68 39.06 47.70 58.57 42.44 84.54 26 ER1h ExonRegion 1 80.09 36.23 56.54 27.95 73.08 111.76 63.08 43.13 39.83 74.40 245.03 54.44 120.93 232.56 196.82 211.95 251.54 50.17 37.99 50.44 151.67 83.90 84.04 27 E1b_E2a KnownJunction 0 118.02 79.39 122.70 45.91 85.65 54.80 63.42 74.80 92.16 140.35 400.15 140.90 223.85 396.85 243.28 249.76 470.69 115.28 51.77 89.87 258.48 141.45 146.31 28 ER2a ExonRegion 0 88.94 47.64 114.22 52.05 112.51 74.75 74.49 68.48 83.49 110.81 361.96 209.26 286.99 431.94 302.49 382.84 314.76 124.28 84.41 83.64 189.57 210.34 148.37 29 E2_Da KnownBoundary 0 0.00 3.03 0.00 2.06 8.32 0.00 0.00 2.55 3.53 0.00 4.79 0.00 0.00 2.12 5.19 0.00 0.00 0.00 4.80 0.00 0.00 5.82 0.00 30 E2a_E3a KnownJunction 0 104.69 33.81 101.30 72.32 109.59 77.11 110.67 72.37 79.86 95.04 297.13 246.23 152.91 334.16 305.71 498.42 245.72 111.30 71.25 66.60 137.52 279.71 130.43 31 E2a_E4a NovelJunction 0 3.78 0.00 1.54 6.79 8.06 5.05 3.97 0.00 11.72 1.45 7.11 0.00 7.95 7.24 15.08 8.72 14.31 0.00 0.00 0.00 0.00 2.94 4.35 32 ER2b ExonRegion 0 0.45 0.56 0.00 1.96 2.70 1.57 1.99 2.41 3.54 1.83 2.74 8.57 4.00 4.23 1.34 5.73 5.64 1.18 1.00 2.32 2.79 2.07 1.91 33 E3_Aa NovelBoundary 0 20.60 2.43 1.66 0.00 7.47 13.80 18.06 5.09 3.59 1.53 2.68 0.00 13.64 0.00 4.45 16.06 18.61 0.00 3.58 2.75 3.15 10.84 4.18 34 ER3a ExonRegion 0 105.95 29.69 117.51 69.86 85.30 83.80 76.82 90.74 85.87 118.52 311.54 205.30 300.26 322.84 371.19 432.56 295.63 125.13 53.71 72.04 170.74 200.68 121.17 35 E3a_E4a KnownJunction 0 169.22 52.10 171.46 100.69 124.87 140.83 82.89 133.61 112.61 174.93 447.38 264.24 466.53 422.04 442.18 428.52 390.93 123.99 75.67 134.80 175.32 179.11 163.38 36 E4_Aa NovelBoundary 0 17.63 3.35 3.31 3.80 20.03 0.00 29.10 6.90 4.34 4.84 7.90 0.00 21.26 9.89 4.45 20.68 12.25 0.00 7.72 8.44 3.03 5.76 4.35 37 ER4a ExonRegion 1 193.81 64.24 198.59 107.73 237.05 217.22 101.31 136.90 132.13 181.05 533.57 297.36 658.31 464.90 547.02 431.84 472.10 106.25 98.75 123.50 192.12 234.63 176.00 38 E4_Da NovelBoundary 0 215.22 68.94 215.40 107.45 234.04 167.46 110.76 115.75 129.74 168.96 497.55 274.44 542.66 409.62 535.51 298.98 414.49 65.37 74.73 128.03 196.51 260.85 180.29 39 E4a_E5b KnownJunction 0 0.00 2.43 0.00 0.00 6.45 0.00 1.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.33 0.00 40 E4b_E5a KnownJunction 0 163.07 66.63 273.91 111.41 176.40 257.92 154.66 136.20 159.17 193.92 487.02 405.28 381.14 396.49 561.35 280.27 416.46 98.08 53.08 134.61 156.42 202.32 128.90 41 ER4b ExonRegion 0 151.61 62.14 234.73 103.83 188.00 212.38 115.28 128.87 149.45 192.59 528.47 318.78 463.97 404.47 487.84 285.65 439.14 89.38 66.18 133.10 174.09 244.62 152.16 42 E5_Ab NovelBoundary 0 167.21 117.94 182.10 129.59 182.77 196.42 167.55 129.10 142.76 189.14 480.23 282.54 513.93 388.37 442.55 267.02 414.59 96.30 102.31 121.12 130.16 212.11 128.73 43 ER5a ExonRegion 0 158.03 90.68 213.31 120.89 166.09 221.96 152.60 127.65 149.31 195.40 508.64 343.47 451.81 385.16 461.73 269.58 437.67 107.85 83.06 129.47 135.00 216.99 125.73 44 ER5b ExonRegion 0 269.09 124.32 234.89 192.60 281.91 209.44 192.25 157.78 185.27 211.38 516.37 482.66 671.31 439.84 498.62 347.23 419.70 126.47 91.16 144.84 102.59 287.32 174.28 45 E5a_E6a KnownJunction 0 209.67 138.99 281.18 181.83 270.54 204.26 243.82 140.35 184.20 222.04 488.91 497.86 641.19 318.85 434.39 370.93 460.50 82.74 103.44 148.48 94.64 305.07 102.78 46 ER6a ExonRegion 0 244.16 126.29 247.38 186.58 328.47 254.20 246.18 182.56 168.47 218.83 506.30 519.19 689.72 357.86 593.13 385.96 467.87 79.71 120.22 144.38 92.73 346.24 170.15 47 E6_Da KnownBoundary 0 0.00 2.70 0.00 9.32 3.48 2.73 0.00 4.27 6.54 2.10 6.79 25.51 12.01 17.84 4.45 16.66 8.13 0.00 0.00 3.26 0.00 11.21 16.22 48 E6a_E7a KnownJunction 0 348.80 117.02 197.04 194.65 386.76 241.22 288.69 216.95 156.91 194.80 549.24 652.41 799.95 441.11 741.09 420.49 372.04 83.28 152.19 201.53 100.08 398.81 189.42 49 ER6b ExonRegion 0 1.67 2.95 0.08 4.15 1.77 2.60 4.36 1.17 1.89 0.15 5.92 16.27 0.91 6.44 2.29 3.55 5.16 0.00 0.00 2.44 0.00 5.14 3.74 50 I6 Intron 0 2.72 3.28 3.30 4.78 7.47 3.31 4.93 5.43 5.14 5.19 5.56 16.43 17.76 4.64 3.55 6.92 6.14 0.05 0.35 3.38 0.84 7.19 3.46 51 I6_AR1 ActiveIntronRegion 0 3.96 7.25 6.66 9.79 8.29 4.38 3.76 5.84 3.44 7.45 3.13 20.89 21.19 3.03 5.36 7.53 3.79 0.00 0.00 3.98 0.70 8.18 2.81 52 E7_Aa NovelBoundary 1 3.78 2.63 6.77 0.00 11.46 0.00 15.19 6.57 3.01 4.38 5.00 38.86 19.15 4.59 4.45 3.93 4.77 1.95 0.00 9.40 0.00 10.65 0.00 53 ER7a ExonRegion 0 260.36 118.72 201.05 180.40 391.21 243.34 192.15 187.62 163.47 214.89 531.64 705.18 789.30 408.43 650.09 354.95 399.45 82.97 97.66 163.15 98.74 345.10 163.88 54 E7a_E8b KnownJunction 0 322.21 145.37 205.34 172.24 456.28 293.41 230.88 168.77 150.23 196.82 509.29 677.17 701.90 423.63 606.71 345.38 407.95 74.45 100.61 162.03 88.40 357.54 219.04 55 E8_Aa NovelBoundary 0 10.52 6.45 20.58 10.82 11.80 14.03 14.13 11.30 6.11 2.74 8.05 0.00 0.00 3.00 0.00 0.00 8.42 2.11 4.24 3.20 11.00 5.88 18.78 56 ER8a ExonRegion 0 11.51 3.24 13.36 6.85 12.49 2.82 5.83 7.39 8.41 1.90 11.19 13.15 12.05 3.42 4.85 4.83 5.54 1.12 2.55 1.77 0.55 13.95 4.13 57 E8_Ab KnownBoundary 0 6.45 9.27 14.43 5.13 27.93 0.00 3.84 6.94 13.34 2.95 2.32 5.85 6.49 4.89 0.00 0.00 8.13 0.00 0.00 0.00 0.00 11.08 3.76 58 ER8b ExonRegion 0 245.64 105.81 247.96 179.06 344.15 265.90 176.55 191.10 187.96 223.58 493.63 653.24 745.58 407.89 535.88 344.68 452.03 82.28 105.40 155.82 87.57 325.76 167.22 59 E8a_E9a KnownJunction 0 316.65 102.48 250.08 141.17 321.22 263.03 168.08 173.17 161.20 186.96 422.42 583.69 552.40 396.32 456.27 303.51 468.16 63.67 108.05 140.62 62.83 267.04 98.59 60 ER9a ExonRegion 0 358.60 121.55 273.93 175.05 331.74 219.50 191.52 216.84 183.92 223.08 481.85 719.33 589.80 409.32 606.31 336.78 405.59 75.28 104.38 153.49 129.33 291.21 150.24 61 E9_Da KnownBoundary 0 0.00 0.00 3.31 0.00 4.24 2.27 10.69 2.01 4.48 1.34 5.05 0.00 21.75 0.00 0.00 0.00 0.00 1.87 0.00 2.49 0.00 3.12 0.00 62 E9a_E10b KnownJunction 0 1123.38 225.68 291.41 181.36 476.49 246.17 289.75 178.06 184.49 243.96 446.22 631.26 569.44 495.85 758.02 324.36 403.65 89.71 129.42 149.12 156.48 288.84 172.35 63 ER9b ExonRegion 0 3.76 1.53 1.94 0.51 4.21 2.21 2.89 2.42 4.19 1.39 0.52 5.14 10.81 0.36 1.02 1.49 0.00 0.59 0.00 1.15 0.03 2.75 0.73 64 ER10a ExonRegion 1 14.13 2.23 9.10 3.90 7.59 3.35 5.89 2.50 3.57 5.20 4.69 12.94 21.56 10.17 14.80 16.51 8.87 1.02 2.61 4.84 7.39 3.41 3.01 65 E10_Ab KnownBoundary 0 9.33 7.63 18.95 3.80 3.31 2.61 0.00 2.22 4.11 6.80 0.00 0.00 26.62 0.00 4.45 7.35 8.32 2.57 0.00 2.43 5.50 3.12 3.33 66 ER10b ExonRegion 0 591.47 182.83 270.89 186.21 332.19 185.46 185.97 197.81 204.44 225.15 520.41 646.01 471.22 512.60 669.98 424.97 402.71 122.33 123.03 148.57 173.54 291.94 186.05 67 E10_Da KnownBoundary 0 12.82 0.00 3.02 2.06 20.12 9.26 15.50 4.27 5.24 6.50 4.84 6.30 21.91 7.18 0.00 7.09 8.51 0.00 0.00 0.00 5.56 0.00 0.00 68 E10a_E10c KnownJunction 0 192.92 175.56 254.99 160.35 347.03 215.78 249.52 153.99 162.93 216.21 409.58 669.22 452.41 407.15 630.94 301.37 273.12 113.71 60.90 121.76 141.41 200.36 132.91 69 ER10c ExonRegion 1 11.66 1.97 2.38 3.20 11.71 3.52 8.83 4.38 2.89 6.00 3.55 16.32 17.91 4.02 3.85 6.27 7.64 0.89 0.01 0.82 3.20 8.27 2.26 70 E10_Db KnownBoundary 0 7.19 0.00 1.83 3.66 3.57 0.00 14.09 7.64 2.34 4.14 12.53 12.45 27.27 3.00 4.45 0.00 8.32 0.00 0.00 0.00 0.00 10.53 0.00 71 ER10d ExonRegion 0 6.16 1.30 3.28 2.82 7.03 1.84 4.30 4.03 2.59 3.55 3.33 9.26 13.44 3.68 3.79 3.07 3.86 0.06 0.20 0.87 0.84 4.61 1.34 72 E10_Ac KnownBoundary 0 0.00 0.00 1.80 1.80 0.00 0.00 0.00 4.03 1.33 1.67 0.00 0.00 8.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 73 ER10e ExonRegion 0 146.66 95.31 204.62 167.29 253.29 150.07 115.38 186.04 176.84 212.90 366.65 468.22 352.17 315.77 469.62 230.51 247.08 100.00 47.78 107.67 93.20 198.67 90.26 74 E10_Dc KnownBoundary 0 3.78 0.00 6.45 1.33 0.00 2.67 0.00 2.55 5.93 4.51 33.27 11.85 14.45 2.47 4.45 15.38 9.16 0.00 0.00 0.00 0.00 3.12 3.41 75 E10c_E10d KnownJunction 0 231.67 98.27 230.51 238.46 343.38 187.39 109.08 221.27 193.05 216.56 461.27 589.69 458.74 423.04 633.04 281.55 282.75 101.15 57.88 122.85 84.02 312.23 117.97 76 ER10f ExonRegion 0 0.82 0.61 0.23 0.35 0.39 1.02 0.85 0.36 0.28 0.41 1.05 0.57 0.67 1.22 1.25 0.88 0.58 0.12 0.17 0.23 0.13 0.22 0.07 77 E10_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 7.39 0.00 2.25 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78 ER10g ExonRegion 1 343.37 88.01 95.99 83.31 112.56 77.99 77.33 76.87 65.93 72.93 101.65 193.99 158.35 115.09 196.39 103.94 57.78 31.03 27.50 34.51 18.74 103.82 49.15 79 ER10h ExonRegion 1 93.13 20.34 2.25 5.45 32.33 10.54 13.46 1.73 3.81 0.00 3.22 16.60 4.30 3.25 20.79 2.72 3.03 0.00 0.00 0.00 0.00 0.00 2.94 80 ER10i ExonRegion 0 2.12 0.00 0.00 1.36 2.68 0.00 2.65 0.00 0.00 0.00 0.00 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00