Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CD80 Gene 0 12.86 0.19 0.52 1.35 4.56 2.00 1.94 2.93 3.89 1.78 116.90 132.07 116.17 200.04 119.97 25.93 177.09 0.30 0.60 0.91 0.07 0.26 0.23 2 383669 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.69 4.63 0.00 0.00 7.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 383668 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 264246 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 478182 Transcript 0 12.42 0.00 0.00 0.39 1.07 1.04 2.06 3.75 1.30 1.77 61.88 43.38 44.79 42.67 89.37 14.40 67.22 0.52 0.60 1.38 0.00 0.00 0.00 6 463729 Transcript 0 2.09 0.00 0.00 0.51 1.03 0.00 0.65 0.00 0.45 0.09 12.03 16.21 15.77 10.00 23.97 3.00 17.51 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 4.04 0.00 0.00 0.00 9.00 5.50 0.16 0.00 0.60 0.00 25.65 7.08 2.42 17.23 11.78 7.48 36.41 0.00 0.00 0.00 0.00 0.00 0.00 8 E1_Ab KnownBoundary 0 13.63 0.00 0.00 2.06 23.51 8.52 2.12 5.09 0.00 1.34 61.65 20.26 6.33 44.26 25.59 13.07 80.60 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 1 62.81 0.00 0.00 0.83 16.75 14.87 4.17 1.62 3.52 4.51 244.09 22.21 27.02 182.29 211.60 72.62 301.39 0.00 0.00 0.00 0.00 0.00 0.00 10 E1_Ac KnownBoundary 1 64.68 0.00 0.00 1.93 10.61 19.65 6.27 2.55 3.59 8.11 245.01 49.97 40.26 124.26 148.59 93.48 369.61 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1c ExonRegion 0 21.27 0.00 0.00 1.83 3.74 5.44 2.37 1.10 4.20 5.23 196.26 132.83 87.94 115.45 86.11 24.93 273.89 0.00 0.00 0.00 0.00 0.00 0.00 12 E1a_E2a KnownJunction 0 7.26 0.00 0.00 2.06 0.00 0.00 0.00 2.55 9.72 9.48 317.71 251.03 225.15 271.06 192.84 54.34 418.33 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 5.54 0.00 0.00 0.67 7.82 4.47 2.07 1.77 5.38 3.66 192.68 177.17 131.80 265.41 211.50 65.92 267.11 0.00 0.00 0.00 0.00 0.00 0.00 14 E2_Ab KnownBoundary 1 2.82 0.00 0.00 0.00 15.03 25.61 6.76 1.97 4.34 2.69 143.04 162.65 46.43 235.51 158.97 40.33 272.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER2b ExonRegion 0 13.33 0.00 0.43 0.48 9.30 6.60 2.80 2.07 4.74 1.21 211.35 241.63 138.88 347.37 180.10 36.60 311.91 0.00 1.54 0.00 0.62 0.00 0.00 16 E2a_E3a KnownJunction 0 36.30 0.00 0.00 0.00 4.33 2.38 2.25 5.09 1.22 0.00 216.79 191.31 112.65 391.08 220.16 48.96 337.26 0.00 0.00 0.00 2.41 0.00 0.00 17 ER3a ExonRegion 0 21.44 0.00 0.65 3.57 7.51 3.19 2.45 3.88 8.16 1.05 233.57 255.42 265.74 454.99 247.05 70.01 382.25 1.62 0.00 0.34 0.30 0.00 0.00 18 E3_Da KnownBoundary 1 0.00 0.00 0.00 0.00 3.90 0.00 0.00 0.00 0.00 1.26 44.59 30.46 32.79 33.85 94.81 0.00 25.99 0.00 0.00 0.00 0.00 0.00 0.00 19 E3a_E4a KnownJunction 0 13.41 0.00 3.67 0.00 22.33 0.00 0.00 2.55 5.21 0.00 254.06 286.89 412.31 503.62 284.69 85.36 412.25 0.00 0.00 0.00 0.00 0.00 0.00 20 E3a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER3b ExonRegion 0 2.09 0.00 0.00 0.51 1.03 0.00 0.65 0.00 0.45 0.09 12.03 16.21 15.77 10.00 23.97 3.00 17.51 0.00 0.00 0.00 0.00 0.00 0.00 22 ER4a ExonRegion 0 17.89 0.00 1.68 2.54 6.52 3.70 4.62 3.71 4.13 1.49 219.34 278.59 304.49 413.22 209.60 51.76 331.37 0.00 0.00 0.38 0.00 0.00 0.00 23 E4_Da NovelBoundary 1 5.48 0.00 0.00 3.70 12.99 0.00 1.94 0.00 0.00 0.00 7.53 24.46 52.92 46.38 23.73 0.00 40.21 0.00 0.00 2.81 0.00 0.00 0.00 24 E4a_E5a KnownJunction 0 17.34 0.00 0.00 1.33 0.00 10.51 2.12 6.98 2.72 1.53 219.74 218.47 170.28 314.20 215.09 50.67 293.59 0.00 0.00 0.00 0.00 0.00 0.00 25 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.69 4.63 0.00 0.00 7.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 I4 Intron 0 5.38 0.16 0.40 1.06 1.56 0.46 1.28 1.55 0.90 1.13 15.72 31.39 37.53 34.31 23.31 5.96 34.09 0.06 0.25 0.84 0.07 0.03 0.09 27 I4_SR1 SilentIntronRegion 0 5.38 0.16 0.40 1.06 1.56 0.46 1.28 1.55 0.90 1.13 15.73 31.40 37.56 34.33 23.32 5.96 34.11 0.06 0.25 0.84 0.07 0.03 0.09 28 E5_Aa NovelBoundary 1 9.33 0.00 5.03 3.30 0.00 0.00 1.81 2.55 1.79 0.00 43.27 41.71 75.16 58.92 95.68 16.75 59.65 0.00 0.00 0.00 2.66 0.00 0.00 29 ER5a ExonRegion 0 10.98 0.00 2.43 0.94 6.27 4.72 3.17 4.74 5.25 3.55 229.07 316.05 283.94 396.12 268.58 36.16 309.08 0.00 0.00 0.00 0.00 0.00 0.00 30 E5a_E6a KnownJunction 0 6.22 0.00 1.74 7.26 3.99 0.00 4.24 6.49 6.16 1.37 210.26 305.50 326.11 379.13 254.03 30.16 323.05 0.00 0.00 0.00 0.00 0.00 0.00 31 ER6a ExonRegion 0 11.38 0.00 1.06 2.83 6.43 0.99 4.81 5.80 4.68 6.61 196.91 263.02 185.71 343.43 281.66 40.27 317.46 0.00 1.49 2.56 0.00 0.00 1.37 32 E6_Da KnownBoundary 1 0.00 0.00 0.00 0.00 8.66 0.00 1.81 2.26 1.53 3.81 78.76 112.09 73.86 40.20 205.08 7.69 86.11 0.00 0.00 3.26 0.00 0.00 0.00 33 E6a_E7a KnownJunction 1 9.63 0.00 0.00 1.70 8.06 2.21 1.85 2.51 7.38 6.61 106.34 127.09 162.98 244.39 83.57 8.63 222.53 0.00 0.00 0.00 0.00 0.00 0.00 34 ER6b ExonRegion 1 12.42 0.00 0.00 0.39 1.07 1.04 2.06 3.75 1.30 1.77 61.88 43.38 44.79 42.67 89.37 14.40 67.22 0.52 0.60 1.38 0.00 0.00 0.00 35 E6_Db NovelBoundary 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 1.67 8.84 25.21 50.81 8.89 22.87 0.00 8.51 2.57 0.00 6.14 0.00 0.00 0.00 36 ER7a ExonRegion 0 10.19 0.43 0.38 1.01 3.12 0.18 0.98 2.94 3.58 1.41 56.73 75.32 61.65 121.65 60.24 9.98 92.74 0.23 0.89 1.42 0.00 0.58 0.41