Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATP6V1A Gene 0 72.26 215.92 94.91 121.49 192.12 154.16 111.15 198.22 340.90 221.74 96.85 218.72 168.22 193.74 184.57 175.78 139.07 90.50 45.25 207.00 61.22 143.09 154.59 2 273398 Transcript 0 65.50 141.94 76.31 84.44 132.61 91.80 70.60 135.71 175.57 121.92 37.19 108.53 85.93 69.64 133.65 56.51 38.76 21.07 17.45 81.45 14.05 75.62 49.67 3 462855 Transcript 0 1.35 2.80 2.73 3.38 4.70 1.12 7.90 2.65 5.40 6.74 0.69 11.38 18.51 4.04 3.40 10.85 2.02 1.24 0.00 8.44 2.63 5.71 2.27 4 470455 Transcript 0 0.00 0.64 0.00 0.00 3.63 0.00 1.34 4.04 4.31 0.90 0.00 0.00 6.02 3.22 0.00 1.93 0.93 1.93 0.00 2.69 0.00 0.00 2.82 5 496747 Transcript 0 0.00 0.00 0.00 0.00 0.00 2.50 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 3.26 0.00 0.00 0.00 6 475322 Transcript 0 0.08 0.15 0.00 0.05 0.19 0.20 0.33 0.12 0.00 0.00 0.07 0.00 0.00 0.87 0.21 1.06 0.24 1.19 0.00 0.23 0.08 0.30 0.42 7 461496 Transcript 0 0.34 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 0.29 0.00 0.00 3.23 0.49 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1a ExonRegion 0 0.00 0.54 0.98 0.64 0.89 3.30 2.21 0.12 3.54 0.15 0.00 0.00 0.00 0.43 0.39 0.00 0.00 5.05 0.00 7.23 5.58 0.83 3.52 9 ER1b ExonRegion 0 0.00 5.59 2.45 1.36 2.68 12.84 5.30 1.73 14.20 2.58 0.00 0.00 0.00 3.25 2.90 0.00 1.65 20.33 0.00 19.15 19.28 2.08 16.89 10 ER1c ExonRegion 0 0.00 7.73 2.45 1.36 2.68 25.31 8.47 2.42 17.54 8.03 0.00 0.00 4.69 3.25 5.80 6.54 5.94 33.63 0.00 24.26 23.36 10.00 31.72 11 ER1d ExonRegion 0 3.17 28.22 7.96 4.60 7.69 57.99 23.67 5.62 28.56 17.49 2.90 0.00 4.69 21.11 6.53 15.60 9.08 45.73 0.40 45.48 38.29 26.30 69.75 12 ER1e ExonRegion 1 33.09 110.43 26.69 21.87 84.22 234.76 94.82 49.85 158.25 92.03 51.02 0.14 3.05 183.68 58.58 263.06 127.90 167.53 64.92 198.18 105.53 101.76 304.90 13 E1a_E2a KnownJunction 1 50.60 196.54 47.34 38.62 186.76 326.29 117.43 118.83 331.71 173.15 116.92 0.00 0.00 362.00 107.18 502.35 323.61 275.71 108.24 351.42 108.60 142.43 422.46 14 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.50 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 3.26 0.00 0.00 0.00 15 E1b_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER1f ExonRegion 0 0.15 0.29 0.00 0.10 0.38 0.39 0.66 0.25 0.00 0.00 0.14 0.00 0.00 1.74 0.41 2.12 0.47 2.38 0.00 0.46 0.16 0.60 0.84 17 I1_AR5 ActiveIntronRegion 1 2.65 10.85 6.74 6.70 9.14 5.50 12.69 6.91 11.12 7.55 1.93 22.73 46.12 1.62 2.90 0.00 0.83 0.00 2.39 14.36 0.00 0.00 1.47 18 E2_Ab NovelBoundary 0 14.15 97.22 27.97 34.53 85.74 38.61 38.47 117.31 284.37 130.07 48.28 43.81 76.46 70.93 26.33 154.06 143.71 170.46 4.14 164.08 46.02 41.33 47.55 19 ER2a ExonRegion 1 27.88 140.60 30.97 32.99 128.44 178.45 73.96 106.69 278.41 138.74 86.18 20.01 41.40 176.64 59.03 343.84 260.09 223.26 50.75 259.87 82.15 89.09 225.92 20 ER2b ExonRegion 1 9.68 55.43 16.97 20.71 39.20 21.34 22.37 80.92 179.90 111.55 62.09 73.27 62.75 74.09 19.43 85.43 92.68 78.81 15.15 122.31 92.86 45.49 39.56 21 E2_Da KnownBoundary 0 2.89 0.00 1.48 5.69 4.33 0.00 4.50 2.09 1.33 7.66 2.53 6.30 0.00 4.83 0.00 0.00 0.00 2.07 0.00 2.43 5.50 0.00 0.00 22 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.61 3.18 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E2a_E4a KnownJunction 1 10.15 29.53 27.62 22.34 14.77 14.42 12.98 84.74 204.86 156.71 80.28 49.22 20.45 59.86 27.20 29.22 119.49 44.36 19.67 153.85 180.58 43.72 45.67 24 ER2c ExonRegion 0 1.35 2.80 2.73 3.38 4.70 1.12 7.90 2.65 5.40 6.74 0.69 11.38 18.51 4.04 3.40 10.85 2.02 1.24 0.00 8.44 2.63 5.71 2.27 25 ER3a ExonRegion 0 0.00 1.92 0.00 0.00 3.24 0.00 1.78 3.29 4.66 1.04 0.00 0.00 5.41 2.31 0.00 2.46 2.79 1.85 0.00 4.87 0.00 0.00 8.47 26 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 7.64 0.00 2.25 2.22 5.09 1.67 0.00 0.00 12.66 4.89 0.00 3.33 0.00 3.94 0.00 3.20 0.00 0.00 0.00 27 ER4a ExonRegion 1 9.88 72.36 33.09 55.70 57.21 60.34 34.26 120.01 299.71 170.30 100.27 90.62 71.00 231.05 95.90 311.08 223.95 208.97 63.98 294.57 127.18 129.50 285.13 28 E4a_E5a KnownJunction 0 6.08 98.21 36.96 80.68 181.66 217.89 109.35 138.30 357.95 199.64 89.13 157.25 138.79 136.91 61.81 260.27 207.48 230.31 54.68 288.65 159.94 131.22 190.10 29 ER5a ExonRegion 1 20.29 148.91 39.25 88.13 143.31 198.08 97.00 169.03 447.45 260.02 164.36 244.50 229.88 317.37 121.49 311.24 274.01 212.66 66.00 335.51 161.00 155.63 252.31 30 E5a_E6a KnownJunction 1 13.85 162.47 33.17 70.32 45.67 135.43 77.15 135.91 368.54 191.02 144.09 320.50 206.16 371.12 112.74 288.90 243.38 140.28 44.33 283.60 113.49 93.07 206.75 31 ER6a ExonRegion 1 40.80 234.78 56.81 100.52 125.10 156.24 97.03 199.91 535.90 306.33 216.08 295.94 288.54 406.05 125.30 423.89 296.22 247.18 102.16 352.88 135.78 207.69 355.76 32 E6a_E7a KnownJunction 1 35.64 164.51 55.82 99.55 124.96 136.11 94.86 156.57 427.95 257.74 143.67 362.37 363.29 369.30 87.52 269.50 270.13 162.91 81.70 340.61 126.46 125.28 241.66 33 ER7a ExonRegion 1 17.34 144.20 41.22 95.65 133.97 159.93 93.93 136.33 393.86 238.58 144.84 311.92 204.62 356.76 100.70 311.84 234.92 205.00 77.06 336.86 127.91 155.66 245.23 34 E7_Da KnownBoundary 1 3.04 82.02 19.25 70.65 110.19 142.02 61.61 78.20 236.72 135.17 96.81 138.50 78.73 113.25 33.87 167.14 191.40 153.83 47.62 232.08 99.52 101.46 190.10 35 E7_Db KnownBoundary 1 7.04 114.52 49.88 69.69 100.25 123.62 90.00 86.17 226.79 142.40 81.39 151.70 40.42 182.41 56.74 159.02 123.14 147.62 41.70 261.68 61.04 104.28 165.78 36 ER7b ExonRegion 1 5.08 148.25 49.14 110.39 134.05 185.21 109.89 135.68 380.91 242.34 146.90 272.32 91.92 327.75 89.94 252.63 254.83 262.93 69.76 371.91 128.26 159.60 272.81 37 ER7c ExonRegion 1 8.11 143.66 54.40 106.28 117.68 172.27 107.67 132.93 366.18 237.45 132.46 321.77 208.31 361.26 94.87 244.67 221.72 232.36 67.61 373.46 141.79 141.40 253.55 38 E7c_E8a KnownJunction 1 17.48 176.94 55.85 104.52 124.87 222.14 101.71 147.21 372.88 242.91 117.56 382.17 240.57 368.83 81.34 298.90 201.68 225.34 94.87 369.63 158.77 145.31 242.69 39 ER8a ExonRegion 1 16.62 205.07 34.58 96.09 116.55 158.99 96.69 140.57 383.84 232.96 143.35 272.89 126.08 352.29 107.45 262.29 230.11 168.32 85.30 314.08 136.28 148.85 254.93 40 E8a_E9a KnownJunction 1 23.34 235.81 24.04 95.36 85.48 176.55 97.60 115.38 404.65 220.64 116.92 447.90 127.26 279.30 133.38 210.71 221.22 154.99 108.99 294.98 75.37 119.16 289.64 41 ER9a ExonRegion 1 22.41 184.35 24.53 89.19 111.62 115.60 74.69 109.67 370.69 218.30 134.15 278.91 96.55 291.63 111.26 194.88 223.37 132.21 40.80 235.56 102.28 148.01 226.09 42 E9a_E10a KnownJunction 0 35.34 261.80 29.18 112.17 121.73 125.38 92.30 123.59 414.09 241.76 134.67 246.83 169.96 294.37 149.58 245.49 244.32 154.12 57.32 268.58 106.57 140.04 265.65 43 ER10a ExonRegion 0 17.96 266.43 43.70 89.81 150.10 160.90 100.24 125.77 396.18 243.20 126.31 279.37 124.08 317.83 148.34 281.05 205.41 191.75 67.88 293.27 116.15 151.59 262.29 44 E10a_E11a KnownJunction 0 17.56 305.08 44.74 91.86 166.98 244.86 159.16 125.97 397.30 276.11 122.50 229.12 95.77 288.72 135.73 312.05 183.64 237.57 56.85 332.75 113.11 187.07 319.17 45 ER11a ExonRegion 1 17.30 225.16 57.52 101.19 131.41 155.67 116.55 138.44 390.23 256.50 115.99 185.41 98.16 330.08 132.83 288.84 204.25 206.22 70.08 350.53 139.47 145.14 295.20 46 E11a_E12a KnownJunction 1 25.26 250.02 71.64 100.59 134.55 139.41 99.32 160.89 391.29 291.99 139.25 217.12 144.63 354.11 145.99 310.26 257.60 189.77 59.20 370.21 159.14 166.13 298.09 47 ER12a ExonRegion 1 28.90 226.52 66.15 104.98 136.67 133.95 107.45 147.73 395.68 244.63 109.09 174.67 163.49 332.49 147.47 261.50 254.07 152.96 39.92 314.93 141.18 149.17 248.51 48 E12a_E13a KnownJunction 0 54.16 256.47 74.42 127.22 214.18 187.79 114.07 152.02 422.91 235.34 110.76 180.51 211.67 333.57 189.38 261.38 220.29 157.44 41.13 310.77 86.74 102.20 254.38 49 ER13a ExonRegion 1 29.88 288.32 94.11 117.34 196.46 191.23 143.56 210.16 455.98 272.22 163.89 229.57 193.19 345.84 149.53 327.33 265.90 188.41 66.67 340.11 139.64 171.77 318.81 50 E13a_E17a KnownJunction 0 30.52 235.68 100.44 132.85 241.60 187.79 134.56 235.52 579.16 323.96 164.04 250.43 249.82 384.31 205.08 336.49 305.47 187.37 83.96 415.53 151.66 191.05 369.96 51 ER14a ExonRegion 0 0.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 ER15a ExonRegion 0 1.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.17 0.00 2.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 E15_Da NovelBoundary 0 59.94 76.50 52.75 52.94 75.47 53.21 100.74 77.92 39.09 54.58 29.80 13.20 26.30 12.48 28.18 57.25 43.38 90.74 63.25 96.77 50.35 11.39 63.85 54 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 ER16a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 13.75 2.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 ER17a ExonRegion 0 30.86 195.25 105.65 160.30 244.14 195.68 130.49 253.79 593.26 335.27 203.42 348.59 297.20 336.71 202.87 366.67 319.87 159.30 74.87 355.45 122.97 242.81 312.61 58 E17a_E18a KnownJunction 0 51.94 232.20 121.05 141.61 335.91 213.51 160.31 273.68 580.55 299.99 191.68 332.36 355.66 342.34 244.76 354.61 344.65 127.51 59.11 332.05 110.46 216.40 271.97 59 ER18a ExonRegion 0 37.38 228.20 78.99 138.10 248.64 192.26 155.59 211.29 468.12 271.97 167.77 359.07 262.42 285.53 207.88 313.65 305.93 138.89 91.21 336.22 104.30 228.35 254.29 60 E18a_E19a KnownJunction 0 77.57 176.42 83.82 157.92 309.00 199.77 160.58 256.30 525.46 335.45 153.25 508.22 379.20 289.07 249.58 308.04 283.40 109.11 86.59 373.08 90.13 221.79 217.51 61 ER19a ExonRegion 0 49.10 191.37 91.75 135.72 263.27 204.87 133.83 256.03 527.29 339.78 174.73 481.98 395.49 303.40 220.28 322.86 278.64 126.45 81.76 360.91 97.58 247.03 249.98 62 E19_Da KnownBoundary 0 39.71 203.12 80.13 160.15 307.64 267.46 210.88 280.99 566.46 381.25 200.21 470.70 394.13 273.06 189.63 265.40 241.70 127.76 75.48 330.77 66.72 304.51 213.75 63 ER19b ExonRegion 0 47.97 256.34 74.95 132.37 256.67 187.76 143.92 222.08 466.46 305.93 143.26 436.97 362.55 237.24 222.09 186.01 185.59 87.16 47.42 295.66 45.41 207.39 166.33 64 E19_Db KnownBoundary 1 49.49 367.24 84.62 150.76 401.36 335.55 298.01 203.93 441.52 270.28 117.35 516.77 461.82 206.37 254.16 106.47 119.78 48.54 43.77 246.02 23.97 138.57 130.43 65 ER19c ExonRegion 1 131.01 283.33 151.65 168.24 264.33 180.29 139.00 271.30 347.60 243.68 74.39 217.06 171.86 138.84 266.92 113.02 77.51 37.09 34.91 155.66 22.52 150.40 95.82