Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GSK3B Gene 0 56.24 201.01 72.02 100.60 195.12 179.23 163.03 142.87 123.11 181.31 147.82 133.78 151.64 125.97 73.28 111.86 148.09 201.99 128.87 300.57 110.80 138.71 103.86 2 264235 Transcript 0 37.14 145.72 49.49 70.34 137.14 126.82 116.68 101.00 84.67 128.57 99.54 80.51 96.75 91.94 53.41 74.57 99.88 133.90 90.78 209.30 81.55 97.13 69.91 3 316626 Transcript 1 0.09 30.14 14.33 16.66 35.19 76.26 35.93 35.89 29.95 40.13 8.95 32.40 19.99 23.36 8.24 14.07 27.57 91.05 21.95 137.69 14.80 17.20 26.10 4 473886 Transcript 0 0.00 3.35 8.37 0.00 4.33 5.56 18.20 8.87 7.49 6.93 4.95 12.60 15.26 4.71 13.97 0.00 11.97 40.29 19.86 21.03 9.45 5.69 16.90 5 474830 Transcript 1 13.59 12.38 10.86 9.59 11.90 8.01 25.29 14.33 10.90 8.31 6.38 20.59 28.54 14.59 28.34 17.34 17.45 18.71 14.04 23.81 6.22 6.52 14.15 6 ER1a ExonRegion 0 9.03 26.17 13.23 8.22 21.70 34.83 42.47 26.57 31.62 46.29 74.49 40.91 74.33 86.30 48.78 59.26 86.57 96.06 43.46 123.37 72.63 49.77 46.67 7 E1_Ab KnownBoundary 0 31.26 80.25 74.72 42.15 50.59 75.35 93.09 136.57 127.37 195.64 234.11 322.31 382.12 192.24 128.56 186.87 234.88 117.73 132.05 516.45 35.83 366.85 162.62 8 ER1b ExonRegion 0 32.92 89.41 47.42 39.65 87.20 115.66 151.80 101.49 93.66 146.52 191.99 256.56 270.85 192.46 109.48 146.85 237.10 207.89 106.43 389.37 131.01 151.23 130.34 9 E1a_E2a KnownJunction 0 25.49 83.93 57.60 55.97 41.68 122.49 122.29 89.09 85.62 121.85 147.20 222.52 172.07 323.03 177.39 169.70 186.63 356.46 128.66 418.91 215.48 95.10 126.85 10 I1_SR2 SilentIntronRegion 0 13.08 17.59 11.42 15.00 30.10 3.47 27.00 19.12 9.50 15.05 1.55 8.99 14.08 1.52 6.29 12.08 7.75 3.71 6.60 16.64 0.83 1.39 7.35 11 I1_AR3 ActiveIntronRegion 0 10.30 11.54 19.23 26.40 24.96 4.65 17.07 12.73 5.89 10.55 0.44 6.98 13.50 1.42 6.98 10.03 8.44 8.96 5.65 13.13 0.00 0.28 8.60 12 I1_AR4 ActiveIntronRegion 0 12.14 12.17 21.63 21.27 52.38 6.86 60.09 23.12 10.10 14.28 1.69 3.65 6.57 1.00 9.28 17.05 9.88 9.18 10.33 15.12 1.09 1.04 15.01 13 I1_SR4 SilentIntronRegion 0 10.93 13.65 19.80 16.14 26.52 4.17 20.78 15.16 8.17 9.35 0.60 5.68 8.06 1.39 7.91 15.04 7.50 4.37 7.23 9.66 0.68 1.08 8.49 14 I1_AR6 ActiveIntronRegion 1 4.23 1.49 5.02 13.04 13.91 0.00 9.05 11.81 5.97 13.95 0.00 0.00 10.47 0.00 15.47 8.02 9.79 5.73 8.81 13.48 0.00 0.90 6.46 15 I1_AR7 ActiveIntronRegion 0 25.02 22.03 9.25 20.23 22.63 6.23 29.68 28.15 13.35 17.22 0.51 7.82 14.12 1.39 8.03 13.17 13.46 6.03 7.24 14.87 1.73 1.09 9.16 16 I1_SR8 SilentIntronRegion 0 14.01 2.63 4.57 9.09 17.61 1.95 18.15 4.35 1.09 1.41 1.34 4.19 7.60 0.61 4.34 5.70 4.63 0.55 3.43 15.96 0.33 0.62 3.58 17 I1_AR10 ActiveIntronRegion 0 13.24 7.83 6.15 12.38 15.88 1.47 21.67 7.02 4.13 3.02 1.86 11.71 12.52 0.74 4.08 6.20 12.17 2.50 1.53 7.51 1.06 0.00 3.30 18 I1_AR12 ActiveIntronRegion 0 40.09 19.78 7.84 12.58 23.29 1.89 29.31 8.73 2.99 7.10 1.14 17.79 30.01 0.63 3.31 6.28 6.38 3.13 1.44 14.78 1.62 0.31 3.51 19 ER2a ExonRegion 0 35.08 78.82 59.67 56.45 130.09 113.70 154.02 102.68 121.16 159.01 244.82 244.82 230.88 235.59 143.16 197.16 303.72 330.43 149.86 506.98 206.23 150.11 153.81 20 E2a_E3a KnownJunction 0 33.12 115.05 67.15 74.72 189.05 124.47 183.10 126.14 130.70 192.82 365.83 281.49 218.82 290.37 169.11 273.01 354.93 391.94 162.36 530.07 146.10 209.36 221.26 21 ER3a ExonRegion 0 33.69 80.67 53.45 46.65 104.51 114.07 149.91 116.05 144.29 176.76 362.58 256.57 301.06 249.55 119.33 246.12 392.06 323.11 167.04 466.97 158.64 201.61 179.14 22 E3a_E4a KnownJunction 0 30.60 97.09 36.25 32.56 89.73 106.36 156.20 115.71 155.35 169.71 380.89 260.03 351.44 280.36 126.09 237.12 405.14 255.27 202.08 478.29 147.59 210.21 122.84 23 ER4a ExonRegion 0 54.48 102.43 46.18 52.12 114.55 131.14 124.91 108.27 142.12 175.75 335.66 298.97 306.63 259.74 134.97 205.59 374.19 323.66 175.48 432.83 195.10 210.32 168.29 24 E4a_E5a KnownJunction 0 53.64 99.46 46.72 40.92 153.14 150.65 132.84 95.74 148.96 190.48 287.18 292.90 330.01 329.10 179.00 244.21 356.43 329.35 218.08 481.36 183.29 254.12 180.46 25 ER5a ExonRegion 0 49.07 103.37 44.44 51.08 148.94 172.62 179.02 109.31 143.28 187.03 353.38 283.79 375.24 315.87 144.73 244.74 363.75 358.17 185.72 435.75 245.99 205.62 190.90 26 E5a_E6a KnownJunction 0 81.50 111.69 58.10 65.46 111.46 177.68 206.20 129.51 125.35 197.65 339.61 221.32 409.88 358.00 146.36 305.56 313.70 447.28 213.28 516.77 240.50 201.21 220.15 27 E5a_E8a NovelJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 3.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.81 14.02 0.00 0.00 0.00 0.00 28 ER6a ExonRegion 0 85.55 108.73 72.17 60.53 109.98 139.33 166.46 110.28 133.02 189.20 324.60 265.76 422.45 331.14 162.77 293.21 371.09 390.10 170.88 457.37 222.84 220.13 200.49 29 E6a_E7a KnownJunction 0 81.13 126.82 79.89 64.06 143.63 192.22 142.07 128.85 149.77 242.05 354.56 295.00 397.21 291.90 147.10 274.20 401.50 376.81 178.17 448.57 234.94 199.07 216.82 30 ER7a ExonRegion 0 110.06 139.01 77.87 59.49 126.74 193.90 150.69 116.78 157.23 212.54 357.88 279.74 466.80 306.94 164.96 268.70 372.97 447.70 156.60 508.18 216.50 203.40 226.42 31 E7a_E8a KnownJunction 0 115.87 228.25 117.44 82.77 156.54 318.23 220.46 152.80 174.91 264.83 377.73 269.34 554.51 375.36 247.36 361.44 315.66 519.54 187.30 576.66 239.26 263.86 270.09 32 E7a_E10a NovelJunction 0 0.00 0.00 1.83 0.00 7.98 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 2.47 9.39 3.42 0.00 7.13 3.95 2.43 8.90 3.12 0.00 33 ER8a ExonRegion 0 70.84 165.91 112.08 67.02 154.27 273.98 216.16 163.83 189.33 236.37 439.05 299.09 522.21 396.67 218.17 362.54 472.78 595.55 184.32 573.16 338.98 261.83 259.77 34 E8a_E9a KnownJunction 1 0.00 31.11 10.38 18.11 39.30 123.00 48.36 35.04 29.72 47.63 12.53 43.36 32.79 24.25 10.75 14.61 44.04 99.94 16.75 176.22 14.02 28.41 35.00 35 E8a_E10a KnownJunction 0 56.53 81.37 93.17 43.12 116.81 85.01 104.40 101.12 138.54 159.00 311.34 182.16 343.97 294.25 211.88 299.84 324.73 531.76 206.78 470.11 228.95 190.01 230.22 36 ER9a ExonRegion 1 0.27 26.02 13.79 17.82 33.07 67.33 32.32 36.83 30.50 44.58 10.01 29.09 14.19 28.94 9.52 12.04 25.48 95.14 25.48 124.17 15.93 16.94 20.93 37 E9a_E10a KnownJunction 1 0.00 33.28 18.80 14.05 33.19 38.44 27.12 35.82 29.63 28.18 4.32 24.76 12.99 16.89 4.45 15.55 13.18 78.06 23.62 112.69 14.46 6.25 22.37 38 ER10a ExonRegion 0 63.04 110.67 111.97 74.09 138.02 177.71 150.28 159.30 205.39 240.49 360.08 264.26 396.90 337.65 212.75 360.36 375.00 733.54 223.61 588.67 340.73 241.22 271.46 39 E10a_E11b KnownJunction 1 40.60 83.14 63.51 61.40 114.86 184.72 147.55 71.92 136.02 156.44 270.86 108.79 270.76 237.10 134.74 227.12 318.47 529.11 183.53 448.44 250.32 139.37 161.51 40 E10a_E12a KnownJunction 0 0.00 3.35 8.37 0.00 4.33 5.56 18.20 8.87 7.49 6.93 4.95 12.60 15.26 4.71 13.97 0.00 11.97 40.29 19.86 21.03 9.45 5.69 16.90 41 E11_Aa NovelBoundary 0 143.06 41.37 45.09 47.88 46.86 7.04 69.82 29.74 67.94 48.78 4.63 6.30 27.11 2.47 5.19 39.82 23.94 14.14 7.81 21.86 10.56 21.62 14.00 42 ER11a ExonRegion 0 13.59 12.38 10.86 9.59 11.90 8.01 25.29 14.33 10.90 8.31 6.38 20.59 28.54 14.59 28.34 17.34 17.45 18.71 14.04 23.81 6.22 6.52 14.15 43 E11_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 28.61 2.90 8.74 0.00 2.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 3.67 14.64 0.00 4.78 0.00 44 ER11b ExonRegion 0 144.29 147.91 73.91 69.60 139.47 184.82 170.10 118.73 163.53 194.25 315.28 162.05 237.28 224.89 175.08 255.63 299.20 569.07 183.45 429.26 282.66 188.43 229.51 45 E11a_E12a KnownJunction 0 63.12 70.84 71.52 49.44 111.55 159.62 118.80 86.21 133.33 158.78 217.58 155.45 166.71 159.34 107.05 102.37 256.85 349.16 110.59 331.41 211.03 131.53 151.18 46 ER12a ExonRegion 0 28.29 66.78 43.68 38.51 86.06 79.95 89.69 55.17 102.80 109.04 146.54 109.35 203.64 174.77 80.41 111.87 184.81 239.54 129.63 280.48 167.01 114.32 123.11 47 E12_Da KnownBoundary 0 37.04 31.84 12.21 12.25 39.05 56.27 90.27 13.51 37.70 35.65 47.12 50.12 40.91 31.67 22.75 53.06 60.87 91.16 77.56 123.10 44.17 37.78 49.77 48 E12_Db KnownBoundary 0 0.00 0.00 0.00 0.00 8.66 2.90 13.51 0.00 1.79 0.00 2.68 0.00 0.00 0.00 0.00 4.36 4.77 2.45 33.60 32.60 6.30 3.12 4.35 49 E12_Dc KnownBoundary 0 10.52 14.87 4.88 10.42 34.04 36.23 56.09 23.37 34.90 37.63 72.70 17.56 12.99 32.67 10.38 53.66 72.28 52.44 35.86 98.18 33.92 63.13 47.63 50 ER12b ExonRegion 0 27.51 39.40 13.48 22.49 65.56 63.50 105.75 36.30 66.70 63.65 101.72 108.24 86.18 85.47 35.54 74.30 107.69 139.04 116.27 198.40 77.41 91.15 84.80 51 ER12c ExonRegion 1 23.89 40.38 9.45 20.05 64.22 57.90 102.32 36.30 70.05 62.92 101.34 102.05 89.78 85.85 22.38 74.30 107.99 133.83 115.58 205.47 73.04 97.93 90.20 52 ER12d ExonRegion 0 65.24 265.26 85.75 132.46 252.59 218.81 190.89 175.44 137.72 210.85 124.60 120.12 119.17 97.58 58.05 89.87 113.19 171.75 138.10 295.23 90.46 144.48 93.15