Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MGLL Gene 0 41.66 5.12 29.72 18.46 16.73 10.93 6.83 16.39 21.32 12.60 73.52 39.55 42.80 103.62 148.45 96.97 103.94 4.82 2.57 2.55 84.79 36.56 29.88 2 398104 Transcript 1 4.94 0.00 0.20 0.00 0.00 0.92 0.22 0.00 0.93 0.14 5.32 0.00 0.00 10.69 0.48 3.84 10.04 0.00 0.00 0.00 10.38 4.43 7.71 3 479967 Transcript 0 1.26 0.00 0.49 0.39 0.36 0.00 0.71 1.30 1.40 0.48 3.00 2.80 1.56 2.30 7.62 5.40 7.78 0.00 0.00 0.00 6.51 0.75 1.16 4 453507 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 434178 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 1.93 4.33 0.00 4.06 4.35 0.00 3.30 0.00 0.00 0.00 1.10 0.00 2.94 6 265052 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 494830 Transcript 0 0.00 0.00 0.29 0.66 0.86 0.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.66 0.00 0.00 0.00 0.00 0.34 0.36 1.72 2.42 8 465597 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 476654 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.64 0.00 0.00 0.00 4.00 0.00 2.78 10 493611 Transcript 0 0.00 0.00 0.00 0.23 0.00 0.00 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.01 0.23 0.34 1.53 0.00 0.00 0.00 0.50 0.00 0.00 11 398101 Transcript 1 11.20 0.16 5.78 1.27 2.40 0.00 2.31 1.48 2.23 2.24 120.70 127.77 51.68 110.85 205.70 189.12 55.59 0.00 0.12 0.08 4.96 2.91 3.12 12 484451 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 487473 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 6.01 2.24 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 14 496306 Transcript 0 1.53 0.56 2.72 0.68 0.15 0.82 0.29 1.44 2.20 1.21 10.63 3.13 5.99 19.58 21.44 14.20 15.77 0.00 0.18 0.00 12.49 3.70 2.12 15 476682 Transcript 0 6.47 4.34 8.23 7.41 5.70 3.40 6.29 9.17 9.77 9.11 4.86 5.52 6.99 4.17 9.91 10.74 10.48 12.77 6.11 5.55 7.39 2.83 6.51 16 ER1a ExonRegion 0 4.94 0.00 0.20 0.00 0.00 0.92 0.22 0.00 0.93 0.14 5.32 0.00 0.00 10.69 0.48 3.84 10.04 0.00 0.00 0.00 10.38 4.43 7.71 17 ER1b ExonRegion 0 28.29 1.59 3.97 4.08 6.60 12.49 4.63 1.69 4.73 4.04 18.26 0.00 8.96 35.41 46.65 43.46 64.55 0.00 0.00 0.00 33.99 13.24 12.85 18 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E1a_E3a KnownJunction 0 3.11 3.35 8.22 3.90 0.00 0.00 0.00 2.22 3.47 5.88 21.53 0.00 21.10 31.20 4.45 15.38 42.36 0.00 0.00 0.00 57.70 5.82 0.00 20 ER1c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.58 0.32 0.00 1.27 0.00 0.00 0.98 3.18 1.34 1.78 0.00 0.00 0.26 0.49 0.14 0.74 21 E1_Ac KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 7.79 0.00 5.84 6.83 4.45 0.00 16.83 0.00 0.00 3.26 2.78 2.76 0.00 22 ER1d ExonRegion 0 2.18 0.43 2.58 2.49 1.20 2.45 0.39 1.09 1.14 1.28 8.83 0.30 3.27 14.29 15.71 11.26 21.95 0.26 0.01 0.68 20.36 5.29 10.51 23 E1b_E3a KnownJunction 0 6.89 3.03 18.33 7.72 7.81 2.78 0.00 4.27 10.85 5.24 27.80 0.00 0.00 49.97 35.11 54.17 48.62 1.53 0.00 0.00 59.31 30.68 59.41 24 ER2a ExonRegion 0 0.00 0.00 0.59 1.31 1.73 1.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.69 0.71 0.32 0.48 25 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 4.35 26 ER3a ExonRegion 1 19.90 2.33 25.02 16.48 9.72 3.96 2.01 18.81 24.56 17.37 75.02 8.51 22.09 132.54 123.87 66.25 181.07 1.94 1.08 2.39 175.29 47.17 48.91 27 E3a_E7a KnownJunction 1 13.71 12.63 38.26 21.71 30.56 16.81 8.52 19.72 42.13 15.55 75.91 6.30 53.41 116.08 118.43 75.11 192.05 0.00 0.00 2.62 226.66 69.56 46.18 28 E4_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 19.15 0.00 4.45 0.00 8.70 0.00 0.00 0.00 0.00 0.00 0.00 29 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E4a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.27 0.00 0.00 0.00 2.31 0.00 1.80 32 E5a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.68 0.00 3.76 33 ER6a ExonRegion 0 0.00 0.00 0.00 0.46 0.00 0.00 0.00 0.59 0.00 0.00 0.00 0.00 0.00 0.01 0.47 0.68 3.07 0.00 0.00 0.00 1.00 0.00 0.00 34 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 ER7a ExonRegion 1 12.94 4.83 35.50 15.36 18.68 10.76 10.27 25.26 27.68 12.13 73.22 6.23 42.08 152.96 127.30 78.94 202.00 1.31 0.00 1.81 228.67 62.16 34.55 36 E7a_E9b KnownJunction 1 10.37 2.76 41.99 18.18 27.08 26.23 14.71 38.45 28.47 22.03 74.02 0.00 87.01 217.79 224.49 75.02 216.83 0.00 0.00 0.00 186.01 73.11 29.79 37 I7_SR1 SilentIntronRegion 0 1.58 0.00 0.12 0.78 0.90 0.23 0.99 0.70 0.95 0.32 1.10 4.30 15.63 0.65 2.26 2.44 9.19 0.00 0.00 0.40 2.55 0.39 1.30 38 E8_Aa NovelBoundary 0 3.78 3.22 0.00 1.90 0.00 0.00 0.00 0.00 0.00 0.00 53.07 0.00 12.66 12.30 9.52 21.11 8.23 0.00 0.00 0.00 8.34 0.00 4.18 39 ER8a ExonRegion 1 9.43 0.32 1.91 2.54 4.81 0.00 2.42 0.53 2.78 1.52 111.78 94.83 29.33 72.19 148.47 141.12 67.41 0.00 0.24 0.17 3.61 2.82 2.23 40 E8_Da NovelBoundary 1 26.45 0.00 0.00 1.43 8.66 0.00 0.00 0.00 4.95 2.63 2.11 36.76 6.33 2.47 13.35 17.17 4.39 0.00 0.00 0.00 6.30 0.00 0.00 41 E8a_E9b KnownJunction 1 12.97 0.00 9.64 0.00 0.00 0.00 2.21 2.42 1.68 2.95 129.61 160.70 74.02 149.51 262.93 237.12 43.76 0.00 0.00 0.00 6.30 3.00 4.01 42 ER9a ExonRegion 0 4.66 0.81 10.05 3.00 3.75 3.30 2.12 7.61 6.67 3.90 42.14 26.84 23.45 70.81 100.38 64.20 54.79 0.00 0.64 0.43 43.19 16.25 5.87 43 ER9b ExonRegion 0 17.86 2.80 48.10 14.91 17.39 20.74 8.85 34.35 34.58 22.51 203.32 101.20 100.25 337.31 460.21 275.48 256.64 0.00 0.00 0.00 231.25 75.01 29.37 44 ER9c ExonRegion 0 33.26 6.34 65.74 30.42 19.62 14.26 7.50 23.56 44.46 21.63 240.13 100.48 100.95 363.10 400.78 314.45 316.91 0.79 3.37 0.00 285.77 97.61 65.14 45 E9b_E10b KnownJunction 1 36.38 9.08 48.52 15.85 3.23 18.57 8.35 33.02 46.90 22.81 190.84 31.06 110.54 358.47 409.17 274.03 276.39 0.00 4.52 0.00 215.66 48.37 49.25 46 I9 Intron 0 16.27 0.47 1.11 0.76 1.74 0.17 0.25 0.60 0.60 0.48 1.26 3.39 7.50 2.95 13.01 6.37 5.69 0.00 0.00 0.00 2.16 0.58 0.82 47 I9_AR1 ActiveIntronRegion 0 13.57 0.00 0.77 1.28 0.61 0.00 0.00 0.27 0.76 0.36 2.43 1.95 5.21 3.31 14.41 8.96 7.95 0.00 0.00 0.00 2.64 0.22 0.92 48 I9_AR2 ActiveIntronRegion 0 26.33 0.51 0.57 0.00 3.86 0.64 0.88 0.43 0.42 0.00 0.66 6.26 11.89 2.48 14.76 5.16 4.86 0.00 0.00 0.00 2.52 1.22 1.10 49 ER10a ExonRegion 0 3.06 1.13 5.45 1.36 0.30 1.63 0.59 2.88 4.39 2.42 21.26 6.25 11.99 39.16 42.87 28.40 31.54 0.00 0.35 0.00 24.98 7.41 4.24 50 ER10b ExonRegion 1 47.90 4.00 56.62 28.98 20.08 10.64 6.71 24.75 36.47 25.71 226.15 39.91 94.07 328.18 381.10 245.52 317.30 0.02 2.45 1.42 258.82 80.35 49.42 51 E10_Da NovelBoundary 1 62.75 2.76 68.68 45.72 34.97 11.13 11.57 16.35 30.96 21.68 212.21 43.66 94.31 331.75 380.74 267.88 278.45 0.00 3.76 0.00 233.52 84.01 47.97 52 E10b_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.85 0.00 0.00 0.00 0.00 3.15 0.00 0.00 53 E10b_E12b KnownJunction 0 78.68 0.00 60.26 43.72 52.21 16.01 12.98 20.37 29.08 20.87 270.65 67.22 86.68 416.51 343.78 352.13 309.68 0.00 3.58 6.26 222.15 106.85 87.58 54 E10b_E13a KnownJunction 0 10.22 2.76 9.46 3.40 0.00 0.00 0.00 0.00 3.27 2.74 21.22 0.00 6.49 29.02 70.83 33.41 42.73 2.03 0.00 0.00 20.26 15.61 16.56 55 ER10c ExonRegion 0 65.52 2.03 67.82 46.04 43.39 14.59 11.97 23.67 33.99 19.75 271.19 69.65 93.39 390.92 378.30 344.90 334.97 1.85 2.22 3.61 258.89 109.79 76.10 56 ER11a ExonRegion 0 2.20 0.00 1.26 0.75 0.00 0.00 0.00 2.15 2.83 1.04 5.67 1.89 0.00 3.64 5.95 8.12 7.41 0.00 0.00 0.00 6.41 0.45 5.87 57 E11_Da KnownBoundary 0 6.15 0.00 0.00 2.06 0.00 0.00 0.00 4.15 6.63 0.00 11.79 7.20 0.00 2.35 5.19 8.20 8.23 0.00 0.00 0.00 14.27 2.94 8.71 58 E11a_E12b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 ER11b ExonRegion 0 1.26 0.00 0.49 0.39 0.36 0.00 0.71 1.30 1.40 0.48 3.00 2.80 1.56 2.30 7.62 5.40 7.78 0.00 0.00 0.00 6.51 0.75 1.16 60 ER12a ExonRegion 0 6.47 4.34 8.23 7.41 5.70 3.40 6.29 9.17 9.77 9.11 4.86 5.52 6.99 4.17 9.91 10.74 10.48 12.77 6.11 5.55 7.39 2.83 6.51 61 E12_Ab KnownBoundary 0 0.00 0.00 1.77 0.00 0.00 2.90 0.00 0.00 3.47 2.31 0.00 0.00 6.17 0.00 9.39 3.85 3.74 0.00 0.00 0.00 2.53 3.12 3.33 62 ER12b ExonRegion 0 72.71 3.75 48.42 27.95 35.32 19.68 12.50 19.55 40.02 21.77 253.77 84.76 98.59 391.63 402.89 332.81 268.40 0.00 3.04 2.55 234.67 108.62 68.85 63 E12_Da KnownBoundary 0 55.42 8.29 42.72 13.98 18.25 37.65 3.75 14.70 45.69 29.15 204.21 57.17 99.18 326.39 450.09 271.38 239.64 0.00 0.00 0.00 230.80 78.32 56.08 64 ER12c ExonRegion 0 42.47 8.60 33.92 16.60 21.16 31.13 8.67 17.52 39.72 22.05 206.47 51.36 94.44 327.56 399.19 268.71 287.18 0.59 2.17 0.53 229.44 61.13 47.52 65 E12b_E13a KnownJunction 0 71.94 8.55 33.47 17.95 31.92 25.67 19.43 23.41 37.12 17.92 247.54 67.52 126.78 353.94 498.80 338.63 355.96 1.78 4.80 2.68 236.79 61.36 62.06 66 E12b_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 6.01 2.24 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 67 E13_Aa NovelBoundary 0 6.74 0.00 13.63 0.00 4.33 0.00 0.00 0.00 2.92 0.00 9.05 0.00 13.64 4.83 19.04 8.37 27.30 0.00 0.00 0.00 24.90 0.00 0.00 68 ER13a ExonRegion 0 62.21 7.03 50.20 28.92 28.33 19.40 10.25 17.90 41.67 18.15 217.98 85.47 119.01 328.90 394.85 243.62 292.31 1.41 0.31 2.25 215.66 65.74 60.21 69 E13a_E14a KnownJunction 0 159.95 3.22 71.70 37.26 53.06 20.78 22.21 24.60 54.74 21.62 229.22 133.99 132.13 454.65 568.27 281.89 330.06 2.40 0.00 3.00 211.28 83.40 98.34 70 E14_Aa NovelBoundary 0 14.30 0.00 3.28 1.63 27.08 0.00 4.02 1.81 0.00 1.42 4.21 0.00 6.82 15.25 8.90 8.29 8.60 0.00 0.00 0.00 0.00 0.00 3.50 71 ER14a ExonRegion 0 188.75 16.83 52.39 31.04 58.55 21.17 9.00 21.86 48.11 22.63 193.32 99.65 114.41 344.59 331.68 207.90 282.38 0.76 0.00 0.77 185.35 85.44 59.65 72 E14_Da KnownBoundary 0 151.66 19.67 30.81 14.08 43.46 9.71 6.23 16.84 32.70 12.36 189.42 94.53 66.23 454.41 441.81 232.76 254.23 0.00 0.00 0.00 189.59 73.85 77.00 73 E14_Db KnownBoundary 0 104.31 6.71 1.36 0.00 17.06 5.34 2.03 0.00 1.53 0.00 10.32 0.00 13.64 3.00 18.67 59.22 27.40 0.00 0.00 0.00 5.99 23.88 4.35 74 E14_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75 E14_Dd KnownBoundary 0 15.19 0.00 0.00 0.00 0.00 2.50 0.00 2.46 1.36 1.26 0.00 0.00 0.00 0.00 5.07 23.58 12.72 0.00 0.00 0.00 8.40 0.00 0.00 76 ER14b ExonRegion 0 129.49 10.54 20.05 7.43 31.50 8.34 4.63 8.41 20.66 8.08 114.74 71.83 68.43 258.46 315.71 162.39 167.90 0.00 0.00 0.00 104.18 57.58 48.72 77 ER14c ExonRegion 0 115.99 6.10 16.91 8.18 23.55 8.44 2.91 2.77 15.56 4.13 50.64 45.89 52.53 89.00 143.90 93.32 84.50 0.00 0.00 0.00 34.38 39.17 30.54 78 ER14d ExonRegion 0 118.52 8.13 19.61 12.27 21.41 11.00 2.65 5.19 17.29 3.44 46.39 56.28 60.97 89.33 130.56 95.11 79.22 0.00 0.00 0.00 28.65 39.59 23.49 79 ER14e ExonRegion 0 103.23 9.29 72.06 42.76 37.60 26.12 11.83 36.00 45.41 23.95 150.33 81.99 96.59 220.64 336.41 203.65 220.45 0.92 1.07 1.36 192.34 90.72 69.71 80 ER14f ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 1.93 4.33 0.00 4.06 4.35 0.00 3.30 0.00 0.00 0.00 1.10 0.00 2.94 81 IG18_AR2 ActiveIntergenicRegion 0 5.15 2.90 6.94 6.70 10.06 2.61 1.42 16.66 6.36 4.97 0.53 1.57 0.00 0.25 0.56 0.00 0.00 0.00 2.20 4.30 2.76 5.13 1.83