Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-905F6.1 Gene 0 12.92 11.23 3.58 3.69 14.97 3.20 11.65 4.12 2.94 2.98 2.11 9.83 14.89 8.31 20.33 8.86 6.24 4.41 7.64 13.90 4.17 2.73 10.24 2 465742 Transcript 0 7.36 6.12 2.14 1.82 7.91 2.05 6.97 2.03 1.75 1.66 1.29 6.23 9.08 5.13 12.44 5.47 3.79 2.50 4.67 7.88 2.50 1.68 5.83 3 ER1a ExonRegion 0 13.30 12.17 0.91 7.12 23.45 3.69 8.95 5.82 0.92 2.98 0.49 1.79 4.09 1.37 4.02 1.49 4.15 2.80 4.00 12.83 1.66 0.01 7.38 4 E1_Da NovelBoundary 0 37.04 34.86 0.00 24.07 71.22 15.33 63.29 3.45 1.79 8.97 0.00 0.00 7.30 0.00 5.81 0.00 4.77 0.00 26.26 22.95 2.35 0.00 3.59 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 31.93 11.27 5.87 5.85 17.51 5.29 11.01 3.71 2.25 0.76 0.00 0.79 0.52 1.14 5.09 1.32 2.56 3.46 3.88 6.37 2.69 1.39 5.21 7 Ix_SR1 SilentIntronRegion 0 40.24 6.78 6.09 6.77 18.73 6.11 19.86 6.01 3.70 1.14 0.00 0.00 1.56 1.72 5.86 1.98 2.20 8.57 3.19 3.55 2.20 0.00 6.85 8 Ix_AR2 ActiveIntronRegion 0 27.78 13.51 5.76 5.40 16.90 4.87 6.60 2.57 1.53 0.57 0.00 1.18 0.00 0.86 4.71 0.99 2.74 0.91 4.23 7.78 2.93 2.08 4.39 9 E2_Aa NovelBoundary 0 70.23 39.80 32.85 47.95 38.03 0.00 32.24 45.39 25.23 29.68 2.68 5.40 0.00 0.00 4.45 11.71 8.04 27.53 18.35 34.64 5.37 6.12 16.13 10 ER2a ExonRegion 0 41.85 38.62 15.03 9.22 37.57 7.54 46.97 9.53 13.63 11.98 11.13 51.26 77.61 44.77 106.01 47.70 27.18 17.35 35.40 54.20 20.86 14.57 43.48 11 E2_Da NovelBoundary 0 50.16 15.79 4.76 5.96 64.94 0.00 21.86 3.78 0.00 1.26 0.00 12.30 0.00 0.00 8.90 0.00 0.00 14.63 3.58 0.00 0.00 0.00 0.00 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 Ix Intron 0 22.56 13.06 3.62 6.92 14.59 1.93 18.21 6.92 2.85 2.22 0.00 2.60 2.54 1.60 2.93 1.11 4.09 2.26 4.87 6.77 1.37 1.68 3.88 14 Ix_AR1 ActiveIntronRegion 0 21.61 15.13 6.27 6.53 24.74 2.01 21.09 6.36 3.15 5.18 0.00 2.35 1.12 1.53 3.92 0.91 4.15 2.82 4.98 6.32 1.54 0.58 3.69 15 Ix_SR1 SilentIntronRegion 0 30.29 10.61 3.40 8.52 15.36 1.81 16.90 4.79 2.41 1.80 0.00 3.12 2.30 1.77 3.20 1.33 3.04 2.43 5.46 6.45 0.76 0.96 3.88 16 Ix_AR2 ActiveIntronRegion 0 17.71 5.26 1.61 7.02 7.11 1.93 13.45 5.11 3.31 1.12 0.00 0.52 1.85 1.89 2.20 0.44 6.79 2.86 4.26 7.12 2.79 1.22 4.16 17 Ix_SR2 SilentIntronRegion 0 17.04 17.85 3.54 5.43 12.56 2.03 20.29 10.06 3.00 1.86 0.00 3.02 3.65 1.34 2.54 1.22 4.07 1.61 4.47 7.15 1.35 3.06 3.86 18 ER3a ExonRegion 0 5.29 0.41 0.00 0.00 4.55 5.78 5.32 0.00 0.00 0.00 0.00 3.03 0.00 0.03 0.00 0.00 2.81 0.00 2.65 1.60 0.00 0.00 0.00 19 E3_Da NovelBoundary 0 31.71 16.38 1.63 0.00 7.22 2.10 26.54 2.55 3.04 1.64 0.00 0.00 13.64 2.30 0.00 0.00 0.00 3.36 4.61 5.31 0.00 3.06 4.35 20 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 Ix Intron 0 17.97 4.38 1.43 2.19 10.02 1.75 9.40 3.09 2.07 1.26 0.00 0.81 0.99 0.64 1.10 0.51 2.51 1.67 2.81 5.78 0.49 0.41 2.80 22 Ix_AR1 ActiveIntronRegion 0 20.27 3.64 2.18 1.82 11.25 3.28 10.20 2.30 1.34 0.60 0.00 1.06 0.00 0.00 0.00 0.00 1.97 1.92 0.95 3.40 0.00 0.00 1.18 23 Ix_AR2 ActiveIntronRegion 0 46.17 5.29 3.33 5.81 17.30 1.43 10.38 2.68 2.64 3.03 0.00 1.13 0.00 1.12 0.00 0.00 1.72 1.92 7.46 4.78 0.00 0.00 2.77 24 Ix_SR2 SilentIntronRegion 0 15.39 4.69 1.35 1.64 9.70 1.86 9.27 3.33 2.15 1.22 0.00 0.74 0.98 0.72 1.46 0.52 2.92 1.79 2.70 6.58 0.70 0.51 3.19 25 E4_Aa NovelBoundary 0 17.26 0.00 0.00 0.00 0.00 0.00 1.72 4.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.64 2.49 0.00 0.00 0.00 26 ER4a ExonRegion 0 4.04 2.16 2.78 0.00 4.08 0.91 1.17 0.12 0.71 0.00 0.00 0.00 0.00 0.00 0.79 0.00 0.00 1.06 0.00 1.73 0.00 0.00 0.00 27 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER5a ExonRegion 0 1.78 1.71 0.53 0.00 1.51 0.51 0.35 2.81 0.52 0.00 0.00 0.00 0.00 0.00 1.15 0.00 0.00 1.29 0.00 0.60 0.00 0.58 1.65