Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RP11-204J18.2 Gene 0 4.02 11.92 7.73 9.78 9.02 14.24 12.15 8.10 8.06 9.40 7.61 4.63 3.36 2.48 6.78 2.13 1.62 5.70 6.97 13.92 3.27 2.82 3.16 2 495542 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 490916 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 474795 Transcript 0 0.00 0.23 0.00 0.68 0.72 0.42 0.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.52 0.00 5 479018 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 462497 Transcript 0 0.00 0.00 1.77 0.00 0.00 0.00 0.00 3.20 3.59 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 466893 Transcript 0 0.00 1.25 1.26 1.00 2.75 1.88 4.19 1.39 1.15 1.64 3.42 4.71 0.43 0.14 1.47 0.00 0.00 1.55 1.44 5.81 1.97 0.32 0.91 8 475371 Transcript 0 0.63 2.74 0.00 1.15 0.00 0.00 0.90 0.00 0.96 0.00 0.67 0.00 0.00 0.00 0.37 0.00 0.00 2.98 2.63 3.21 0.00 0.00 0.00 9 498655 Transcript 0 0.00 0.16 0.00 0.97 1.77 0.49 1.17 0.00 0.88 2.90 0.56 0.29 0.00 1.10 1.20 0.00 0.00 2.93 4.90 2.13 0.00 0.28 0.25 10 479588 Transcript 0 0.00 0.00 0.11 0.00 0.05 0.00 0.05 0.06 0.06 0.02 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.16 0.00 0.00 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1b ExonRegion 0 0.11 0.00 0.00 0.00 0.00 0.00 0.07 0.00 0.00 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER2a ExonRegion 0 0.00 0.47 0.00 0.00 1.44 0.85 0.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2b ExonRegion 0 1.23 3.39 0.00 0.11 3.12 4.74 1.88 0.00 0.00 0.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.02 0.00 0.00 17 E2_Ad NovelBoundary 0 7.11 6.25 5.44 3.46 46.26 23.17 7.64 3.86 3.01 2.98 2.68 0.00 0.00 0.00 0.00 0.00 0.00 5.55 4.24 12.72 0.00 0.00 0.00 18 ER2c ExonRegion 0 4.03 6.10 2.29 2.51 24.86 13.01 4.91 2.62 2.07 1.92 1.87 0.00 0.00 0.00 0.00 0.00 0.00 1.85 1.64 3.64 2.20 0.00 0.00 19 E2a_E5a NovelJunction 0 0.00 20.98 1.83 6.89 7.47 59.57 22.52 11.50 7.09 7.58 33.32 0.00 0.00 5.30 13.35 0.00 0.00 7.50 4.80 20.65 2.41 0.00 0.00 20 E2a_E5b KnownJunction 0 0.00 16.77 13.75 9.22 3.23 62.98 35.51 6.08 1.19 7.98 31.01 0.00 0.00 7.77 14.09 0.00 0.00 3.86 8.28 36.56 5.68 0.00 4.35 21 ER2d ExonRegion 0 3.42 10.64 9.47 10.64 21.61 41.75 21.69 7.78 5.80 6.00 16.21 0.00 0.00 3.81 10.04 0.00 0.00 10.80 8.82 25.29 3.31 0.00 2.60 22 ER2e ExonRegion 0 1.27 5.48 0.00 2.31 0.00 0.00 1.80 0.00 1.91 0.00 1.34 0.00 0.00 0.00 0.73 0.00 0.00 5.96 5.27 6.41 0.00 0.00 0.00 23 E2b_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER3a ExonRegion 0 0.00 0.82 0.00 2.28 0.00 0.14 0.00 0.00 2.01 1.49 1.54 1.43 0.00 0.00 0.82 0.00 0.00 4.92 8.80 3.40 0.00 0.00 1.18 25 E3a_E5b KnownJunction 0 0.00 0.00 0.00 2.60 0.00 2.33 0.00 0.00 2.40 2.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.74 15.72 3.20 0.00 0.00 0.00 26 ER4a ExonRegion 0 0.00 0.00 0.34 0.00 0.15 0.00 0.15 0.19 0.17 0.06 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER5a ExonRegion 0 2.12 5.59 5.51 4.43 4.68 15.13 10.26 6.05 3.71 5.73 12.56 0.00 0.00 1.22 2.90 0.00 0.00 5.08 6.37 7.45 1.10 0.00 0.73 29 ER5b ExonRegion 0 0.94 13.00 15.98 16.38 5.82 31.04 22.26 9.04 8.91 16.97 24.25 1.93 0.00 2.07 2.49 0.00 0.00 11.29 12.19 19.87 2.99 1.20 0.86 30 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.56 3.15 0.00 0.00 31 E5a_E6b KnownJunction 0 0.00 3.35 14.04 10.79 0.00 2.21 7.95 4.07 7.96 8.54 14.79 0.00 0.00 0.00 0.00 0.00 0.00 6.26 18.35 11.44 5.62 0.00 0.00 32 E5a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER6a ExonRegion 0 0.00 0.05 0.31 0.28 5.42 4.00 1.29 0.13 1.68 0.35 2.18 0.89 0.00 0.04 0.00 0.00 0.00 2.70 2.45 4.58 1.53 0.05 1.88 34 E6_Ab KnownBoundary 0 0.00 0.00 1.21 0.00 6.79 11.41 2.21 0.00 3.12 1.42 2.58 0.00 0.00 0.00 0.00 0.00 0.00 4.60 4.80 2.94 0.00 0.00 4.35 35 ER6b ExonRegion 0 1.30 7.80 13.25 13.50 3.11 12.13 4.23 12.60 12.25 20.88 46.55 6.54 0.05 4.68 4.08 0.00 0.00 8.14 10.37 30.85 4.48 3.92 0.99 36 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.00 0.00 0.00 0.00 0.00 0.00 3.13 0.00 0.00 0.00 37 E6a_E8a KnownJunction 0 0.00 9.54 14.34 25.17 8.06 8.69 9.19 14.54 10.62 19.53 24.90 0.00 0.00 11.77 17.80 0.00 0.00 15.59 13.08 40.33 0.00 0.00 0.00 38 E6a_E10a KnownJunction 0 0.00 0.00 3.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.43 0.00 0.00 0.00 39 E6a_E11a KnownJunction 0 0.00 0.00 1.77 0.00 0.00 0.00 0.00 3.20 3.59 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 8.86 0.00 3.78 0.00 0.00 2.61 1.28 0.00 0.00 0.51 0.72 0.00 0.00 0.00 0.00 0.91 0.00 1.38 0.08 41 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00 0.00 7.47 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 E8_Aa NovelBoundary 0 20.82 221.61 16.29 49.51 55.86 28.73 94.68 21.44 32.41 27.94 109.03 0.00 153.72 0.00 22.25 0.00 11.78 28.85 38.68 70.50 139.80 350.50 207.18 43 ER8a ExonRegion 0 1.37 3.63 11.25 17.44 9.28 10.42 7.04 13.30 10.55 17.74 18.59 4.88 0.00 3.08 4.81 0.00 0.00 23.88 7.90 24.10 2.59 1.35 1.82 44 E8_Da KnownBoundary 0 12.89 63.41 12.45 13.68 11.46 2.16 30.60 14.75 28.62 16.55 64.75 0.00 54.22 0.00 13.35 0.00 9.44 12.35 30.49 28.38 67.77 199.38 100.22 45 E8a_E9a KnownJunction 0 0.00 9.34 7.86 19.68 11.71 34.24 10.07 12.94 12.59 9.59 11.74 0.00 0.00 0.00 4.45 0.00 0.00 10.24 13.08 15.21 5.75 0.00 0.00 46 E8a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 7.78 0.00 1.73 3.56 4.03 4.84 0.00 0.00 0.00 0.00 0.00 0.00 10.94 0.00 0.00 0.00 0.00 0.00 47 ER8b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.07 0.49 0.00 0.00 48 E8_Db NovelBoundary 0 17.86 103.07 44.82 44.85 35.40 23.00 52.07 18.77 30.82 55.28 22.69 0.00 135.22 0.00 34.49 0.00 0.00 7.71 24.47 56.31 20.26 409.65 93.30 49 ER9a ExonRegion 0 0.96 10.77 4.62 7.63 12.74 39.38 17.75 7.61 8.59 8.87 18.45 2.78 0.00 1.93 6.42 0.00 1.06 9.35 8.04 13.30 6.38 2.03 0.00 50 E9_Da NovelBoundary 0 3.26 23.94 3.02 1.70 0.00 10.11 2.08 8.38 9.87 6.88 22.95 0.00 0.00 4.53 21.14 0.00 4.77 12.97 0.00 6.33 5.44 5.02 0.00 51 E9_Db NovelBoundary 0 0.00 6.31 1.83 0.00 0.00 0.00 2.25 4.23 0.00 0.00 0.00 0.00 0.00 0.00 5.93 0.00 0.00 8.91 4.80 6.07 0.00 8.70 20.49 52 E9b_E11a KnownJunction 0 0.00 2.70 0.00 7.62 0.00 9.31 0.00 2.05 11.26 3.22 2.47 5.85 0.00 0.00 4.45 0.00 0.00 11.86 4.80 9.59 0.00 0.00 0.00 53 ER9b ExonRegion 0 1.38 11.69 2.45 5.45 0.00 9.90 1.06 3.46 9.94 4.42 12.56 5.20 0.00 2.52 11.75 0.00 3.30 10.44 3.19 10.43 2.98 2.08 0.00 54 E10_Aa NovelBoundary 0 30.82 75.38 45.36 27.27 23.43 44.18 74.90 28.05 51.82 37.74 195.73 0.00 146.58 2.35 90.86 0.00 80.88 98.24 68.05 113.71 437.32 441.00 405.99 55 ER10a ExonRegion 0 0.00 3.44 2.82 1.72 3.46 1.97 11.12 2.44 1.82 3.29 8.41 5.18 1.65 0.89 2.52 0.00 0.00 1.76 2.83 12.30 3.00 1.85 0.00 56 E10_Da KnownBoundary 0 0.00 3.29 0.00 1.37 12.39 7.44 25.84 6.20 2.81 6.15 10.16 6.00 6.66 0.00 0.00 0.00 0.00 4.44 0.00 5.43 2.41 0.00 0.00 57 ER10b ExonRegion 0 0.00 3.69 3.48 2.72 2.82 1.65 11.28 4.02 1.76 4.58 8.09 7.08 1.29 0.39 4.41 0.00 0.00 1.94 1.87 10.30 1.24 0.92 0.86 58 E11_Aa NovelBoundary 0 52.31 23.55 12.57 10.42 42.36 18.40 62.36 23.37 17.01 10.77 7.00 6.60 6.82 2.30 5.56 11.11 20.76 7.83 17.88 20.71 2.41 28.78 42.25 59 ER11a ExonRegion 0 27.81 30.62 12.92 16.54 20.80 24.55 37.77 18.94 14.86 20.98 14.05 15.90 20.48 13.15 17.58 21.60 12.52 28.48 28.57 31.91 9.95 5.67 28.52 60 E11_Da KnownBoundary 0 1161.32 918.78 802.99 859.03 781.66 443.95 841.21 1082.10 868.42 897.89 291.71 124.84 148.69 110.07 256.38 716.48 706.31 1250.52 635.31 643.84 384.19 242.67 733.35 61 ER11b ExonRegion 0 28.79 36.86 25.37 30.50 23.09 17.74 46.19 27.07 15.98 26.64 12.64 9.92 18.35 17.15 28.29 36.09 18.67 27.34 28.98 37.56 16.34 23.07 44.18 62 E11_Db KnownBoundary 0 1791.35 1305.69 2890.58 2714.14 1419.19 830.83 1336.05 2614.65 2744.16 1858.04 489.55 183.66 235.37 114.84 477.41 1479.36 904.91 3297.41 1113.35 1090.36 631.67 557.29 1281.04 63 ER11c ExonRegion 0 49.54 58.22 15.11 18.88 24.53 25.44 42.76 10.59 15.85 18.90 25.66 76.81 76.60 56.75 82.85 41.33 37.53 24.33 30.79 39.64 37.42 11.58 52.21 64 E11_Dc KnownBoundary 0 107.35 102.22 85.83 101.89 107.64 67.97 130.72 64.57 61.46 67.18 26.32 45.16 75.16 36.38 52.04 73.48 61.62 115.36 30.12 106.42 54.30 15.31 58.05 65 ER11d ExonRegion 0 3.74 16.59 10.65 13.96 12.57 21.37 13.77 11.24 12.12 12.37 6.31 3.67 2.56 1.32 7.38 0.30 0.66 4.77 7.47 16.41 2.94 3.21 0.92 66 ER11e ExonRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 0.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.04 0.00