Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	RP11-398A8.2	Gene	0	8.69	3.45	10.86	7.40	12.00	0.98	5.75	2.29	6.06	8.25	42.20	8.98	4.83	8.77	3.17	11.88	8.17	8.36	13.86	10.04	2.23	0.69	0.36
2	481148	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	469218	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	488545	Transcript	0	3.67	1.69	8.98	2.99	1.64	0.35	3.85	0.54	1.74	2.90	79.27	5.15	4.86	8.24	11.69	26.90	14.37	4.30	8.48	5.57	0.63	0.22	0.23
5	462492	Transcript	0	0.00	0.00	0.08	0.01	0.00	0.00	0.00	0.00	0.04	0.00	10.13	4.56	0.00	0.79	0.00	3.11	2.94	0.00	0.00	0.00	0.00	0.00	0.00
6	464271	Transcript	0	0.00	0.00	0.51	0.00	0.00	0.00	0.46	0.00	0.06	0.00	0.70	2.31	0.00	0.64	0.00	1.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	468646	Transcript	0	12.70	4.29	13.43	13.63	17.00	1.22	11.92	2.37	10.48	14.89	20.82	9.16	3.89	6.76	0.93	12.63	4.40	10.77	24.12	14.34	4.81	1.03	1.50
8	498432	Transcript	0	2.50	0.00	3.27	0.21	2.51	0.00	1.93	0.00	0.41	0.73	6.21	0.00	2.56	0.00	0.00	0.45	2.10	0.50	2.12	0.58	0.47	0.00	0.00
9	470712	Transcript	0	1.62	2.00	1.79	1.06	7.30	0.00	1.94	0.65	3.40	1.06	3.57	0.02	0.00	1.44	0.73	0.55	0.10	4.21	1.98	4.78	0.01	0.00	0.00
10	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E1a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	3.69	3.70	9.32	3.51	1.53	0.91	7.97	0.49	0.33	3.54	4.15	0.00	0.00	0.04	6.36	4.37	2.52	5.07	9.63	4.49	0.74	0.00	0.00
15	E3_Ab	KnownBoundary	0	13.19	2.57	20.76	5.56	0.00	5.00	15.41	2.26	1.42	6.98	14.32	6.45	0.00	0.00	0.00	18.71	4.39	4.10	13.55	6.01	3.15	0.00	0.00
16	ER3b	ExonRegion	0	44.32	1.05	11.59	5.27	4.92	1.31	5.25	1.09	6.56	6.63	80.37	2.73	2.43	23.90	10.17	33.87	26.69	10.47	17.03	6.78	2.99	0.00	0.00
17	E3a_E5b	KnownJunction	0	12.22	0.00	6.68	7.26	0.00	0.00	0.00	0.00	11.83	15.34	67.86	0.00	0.00	14.19	6.30	14.10	20.57	9.41	3.48	2.75	2.72	0.00	0.00
18	I3	Intron	0	0.50	0.00	0.00	0.00	1.25	0.00	0.62	0.00	0.43	0.00	11.30	2.50	0.90	2.32	0.00	5.56	2.32	1.29	0.00	0.50	0.00	0.00	0.00
19	I3_SR1	SilentIntronRegion	0	0.50	0.00	0.00	0.00	1.26	0.00	0.62	0.00	0.43	0.00	11.36	2.51	0.91	2.34	0.00	5.59	2.33	1.29	0.00	0.50	0.00	0.00	0.00
20	E4_Aa	NovelBoundary	0	0.00	0.00	1.83	3.90	0.00	0.00	0.00	0.00	1.77	0.00	41.33	12.30	0.00	2.47	0.00	16.41	4.77	0.00	0.00	3.26	0.00	0.00	0.00
21	ER4a	ExonRegion	0	0.00	0.00	1.01	0.00	0.00	0.00	0.91	0.00	0.13	0.00	1.40	4.63	0.00	1.29	0.00	2.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER4b	ExonRegion	0	1.33	0.23	1.26	1.15	0.15	0.00	0.33	1.06	0.73	0.96	13.16	2.83	0.00	3.46	0.00	5.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E4_Ac	KnownBoundary	0	3.78	2.63	0.00	1.96	0.00	0.00	0.00	0.00	1.07	1.56	20.16	7.35	5.84	5.47	0.00	3.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER4c	ExonRegion	0	6.02	1.40	0.05	4.45	2.92	0.00	0.50	0.14	0.53	1.06	38.87	4.49	0.00	7.60	0.78	11.18	0.71	1.05	0.00	1.70	0.00	0.00	0.00
25	E4a_E5b	KnownJunction	0	0.00	0.00	0.00	6.19	0.00	0.00	0.00	1.73	1.42	0.00	36.43	6.00	0.00	4.83	0.00	7.60	8.04	0.00	0.00	0.00	0.00	0.00	0.00
26	E4a_E5c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER5a	ExonRegion	0	3.25	4.01	1.87	2.12	14.60	0.00	3.88	1.31	5.30	0.96	7.15	0.04	0.00	2.89	1.46	1.10	0.19	4.07	3.96	6.30	0.02	0.00	0.00
28	E5_Ab	KnownBoundary	0	0.00	0.00	0.00	1.66	0.00	0.00	0.00	0.00	1.50	0.00	0.00	0.00	0.00	0.00	0.00	4.19	0.00	5.64	0.00	0.00	0.00	0.00	0.00
29	E5_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER5b	ExonRegion	0	9.52	4.07	8.58	11.58	2.01	0.00	4.63	4.32	12.66	11.76	99.54	4.33	0.00	19.90	2.90	19.32	16.50	11.55	9.56	11.17	2.20	0.00	0.00
31	ER5c	ExonRegion	0	1.33	1.30	23.16	12.65	3.78	0.00	2.99	9.51	12.48	19.50	119.56	10.10	5.29	27.29	8.90	36.54	36.02	10.51	42.78	24.13	3.69	0.00	0.00
32	E5_Da	NovelBoundary	0	0.00	0.00	2.99	1.76	4.07	0.00	0.00	2.22	1.24	0.00	27.32	6.30	0.00	2.47	0.00	0.00	7.48	4.15	8.75	8.50	0.00	0.00	0.00
33	E5a_E6a	KnownJunction	0	0.00	0.00	8.40	3.46	0.00	0.00	0.00	0.00	1.79	2.82	148.41	0.00	6.82	10.42	22.99	59.47	28.42	0.00	9.60	5.56	0.00	0.00	0.00
34	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	12.95	6.30	0.00	0.00	0.00	3.76	4.58	0.00	0.00	0.00	0.00	0.00	0.00
35	E5a_E8a	KnownJunction	0	3.56	3.35	16.00	20.38	4.33	0.00	2.25	7.15	10.33	13.14	26.59	0.00	0.00	18.89	0.00	4.36	4.11	16.13	31.62	31.06	2.90	0.00	0.00
36	I5	Intron	0	0.76	0.54	3.26	1.09	1.67	0.00	0.83	0.46	0.49	1.07	11.05	3.57	0.69	2.23	1.16	2.92	2.36	4.02	1.71	3.99	0.20	0.00	0.00
37	I5_SR1	SilentIntronRegion	0	0.76	0.55	3.27	1.09	1.68	0.00	0.83	0.46	0.49	1.07	11.07	3.58	0.69	2.23	1.16	2.93	2.36	4.03	1.71	4.00	0.20	0.00	0.00
38	E6_Aa	NovelBoundary	0	0.00	2.96	8.99	4.06	0.00	0.00	1.99	0.00	6.16	1.16	18.69	0.00	0.00	4.83	0.00	11.54	4.02	18.70	0.00	7.73	3.15	3.12	0.00
39	ER6a	ExonRegion	0	7.31	1.37	9.21	2.01	3.40	0.15	3.58	1.12	3.10	2.33	85.26	15.45	7.78	14.26	5.73	16.86	12.17	7.85	6.20	6.67	1.14	0.66	0.70
40	E6_Da	NovelBoundary	0	10.52	12.70	20.05	5.83	15.87	0.00	7.91	0.00	4.63	2.74	52.59	11.85	6.82	14.42	4.45	4.36	3.46	4.31	0.00	15.40	3.15	2.45	0.00
41	I6	Intron	0	2.76	1.65	4.45	1.35	3.49	0.47	2.63	0.66	1.54	1.83	11.41	6.89	3.73	3.85	1.39	3.69	2.96	3.20	3.13	3.82	0.33	0.27	0.19
42	I6_SR1	SilentIntronRegion	0	2.77	1.65	4.46	1.35	3.49	0.47	2.64	0.66	1.54	1.83	11.42	6.90	3.73	3.85	1.39	3.69	2.97	3.21	3.14	3.83	0.33	0.27	0.19
43	E7_Aa	NovelBoundary	0	2.89	0.00	0.00	0.00	0.00	0.00	2.08	4.60	3.59	1.26	18.32	0.00	11.69	4.71	0.00	0.00	8.70	0.00	9.60	7.80	0.00	0.00	0.00
44	ER7a	ExonRegion	0	0.00	0.00	0.16	0.03	0.00	0.00	0.00	0.00	0.08	0.00	7.31	2.82	0.00	1.59	0.00	2.46	1.29	0.00	0.00	0.00	0.00	0.00	0.00
45	E7_Da	NovelBoundary	0	14.60	0.00	1.71	1.30	8.06	0.00	7.82	0.00	0.00	5.78	27.64	0.00	6.82	2.35	0.00	3.67	0.00	6.18	3.95	5.88	0.00	0.00	0.00
46	I7	Intron	0	1.56	0.36	2.68	0.96	2.20	0.11	2.38	0.61	0.87	1.81	12.91	4.77	3.03	2.71	0.99	3.50	3.01	2.79	3.10	4.70	0.19	0.12	1.21
47	I7_SR1	SilentIntronRegion	0	1.56	0.36	2.69	0.96	2.21	0.11	2.38	0.61	0.87	1.81	12.93	4.77	3.03	2.72	0.99	3.50	3.01	2.79	3.10	4.70	0.19	0.12	1.21
48	ER8a	ExonRegion	0	6.81	8.64	16.02	17.64	30.49	0.58	13.33	5.38	8.26	19.56	27.02	7.70	5.59	7.11	0.64	11.10	10.53	18.85	30.83	15.43	3.14	0.66	0.22
49	E8_Da	KnownBoundary	0	7.19	6.31	10.88	21.31	37.27	0.00	25.44	2.30	11.66	22.97	28.90	25.21	6.82	15.89	0.00	4.36	4.77	18.20	31.25	25.69	2.78	0.00	3.67
50	ER8b	ExonRegion	0	7.75	4.44	12.13	16.53	20.80	2.29	10.07	2.67	6.56	23.09	22.75	22.49	4.23	9.13	1.14	6.98	10.26	14.08	32.72	24.70	5.15	0.00	1.24
51	E8_Db	KnownBoundary	0	22.52	9.67	14.93	24.81	20.46	2.50	4.46	4.76	11.55	21.89	28.74	18.61	12.66	14.19	0.00	14.61	0.00	14.72	8.00	22.63	8.71	0.00	0.00
52	ER8c	ExonRegion	0	28.29	5.62	14.45	15.74	21.34	1.83	7.49	2.77	10.82	15.30	31.03	3.87	13.70	5.73	0.00	25.03	2.08	16.63	28.67	18.03	8.87	1.48	1.00
53	E8_Dc	KnownBoundary	0	22.23	0.00	5.26	0.00	6.88	0.00	5.87	0.00	1.77	1.56	4.47	0.00	0.00	0.00	0.00	3.50	0.00	0.00	19.48	2.94	2.72	0.00	0.00
54	E8c_E9a	KnownJunction	0	3.70	5.20	3.31	11.15	12.31	0.00	4.28	0.00	6.28	7.87	13.95	0.00	0.00	2.30	0.00	28.97	0.00	9.87	13.74	8.82	8.46	2.88	3.76
55	E8c_E10a	KnownJunction	0	0.00	0.00	1.71	0.00	0.00	0.00	0.00	0.00	1.50	1.16	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.35	0.00	3.26	0.00	0.00	0.00
56	E8_Dd	KnownBoundary	0	0.00	0.00	1.83	0.00	3.57	0.00	3.93	0.00	0.00	1.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER8d	ExonRegion	0	15.52	0.00	7.15	1.36	8.03	0.00	5.30	0.00	1.85	1.15	14.82	0.00	7.04	0.00	0.00	2.97	3.30	1.85	15.93	2.13	2.20	0.00	0.00
58	ER8e	ExonRegion	0	2.50	0.00	3.27	0.21	2.51	0.00	1.93	0.00	0.41	0.73	6.21	0.00	2.56	0.00	0.00	0.45	2.10	0.50	2.12	0.58	0.47	0.00	0.00
59	E8_De	NovelBoundary	0	0.00	5.79	14.13	2.06	0.00	0.00	0.00	4.76	1.77	6.31	2.53	0.00	0.00	0.00	4.45	0.00	4.30	4.60	0.00	5.11	3.03	0.00	0.00
60	E9_Aa	NovelBoundary	0	165.14	203.38	228.26	358.60	201.10	139.07	278.98	315.86	341.20	280.95	46.64	23.56	33.60	18.72	28.68	100.32	108.37	364.54	129.04	306.55	120.47	46.60	200.09
61	ER9a	ExonRegion	0	5.08	6.16	6.44	8.79	7.03	1.83	5.80	1.32	8.80	17.63	20.14	7.13	3.86	4.43	1.02	9.30	2.36	12.93	16.93	9.20	7.50	0.49	2.56
62	E9_Da	NovelBoundary	0	10.15	20.06	13.45	10.45	39.98	23.05	35.51	12.82	10.30	2.50	9.42	6.15	0.00	2.41	5.07	36.06	19.92	8.21	16.57	20.65	2.53	2.51	7.85
63	E9a_E10a	KnownJunction	0	2.89	0.00	8.07	13.75	3.31	0.00	21.90	0.00	11.17	7.58	14.06	0.00	0.00	7.24	0.00	7.60	8.51	10.11	16.19	13.87	0.00	0.00	0.00
64	ER10a	ExonRegion	0	10.88	7.10	13.80	11.05	26.20	2.92	11.10	5.41	12.14	14.77	28.09	7.08	4.10	10.95	2.53	14.28	8.11	19.69	21.47	17.62	3.90	0.74	0.00
65	E10_Da	KnownBoundary	0	29.93	5.46	23.71	13.58	38.29	0.00	20.76	0.00	1.79	18.16	32.11	12.45	6.82	16.78	8.90	15.04	7.76	14.80	23.34	11.31	0.00	0.00	0.00
66	ER10b	ExonRegion	0	10.66	8.63	15.89	15.03	27.23	0.16	9.71	2.61	12.76	17.87	33.80	7.66	7.71	13.94	3.76	15.32	7.09	18.04	33.86	17.54	3.02	0.79	0.50
67	E10b_E11a	KnownJunction	0	10.15	5.00	23.77	18.68	25.13	2.38	13.73	4.19	11.02	20.01	25.06	18.61	0.00	7.24	0.00	7.78	0.00	10.74	20.80	15.02	5.81	0.00	4.35
68	ER11a	ExonRegion	0	15.40	4.13	19.39	17.18	20.86	3.45	16.52	3.59	10.79	21.26	24.82	12.48	1.10	11.27	1.02	12.94	7.38	12.54	42.35	11.89	5.90	0.18	0.81
69	E11a_E12a	KnownJunction	0	41.86	0.00	14.72	11.95	19.02	0.00	16.25	4.15	13.83	15.15	20.37	20.71	13.64	4.77	0.00	12.30	4.77	5.76	32.19	24.35	4.88	2.45	0.00
70	E12_Aa	NovelBoundary	0	10.74	0.00	3.25	5.19	4.33	0.00	0.00	0.00	2.95	0.00	4.95	0.00	6.01	0.00	0.00	0.00	0.00	2.28	0.00	2.56	0.00	0.00	0.00
71	ER12a	ExonRegion	0	11.84	5.18	15.86	12.47	21.11	1.96	7.19	3.10	9.14	11.72	14.33	6.68	4.79	2.89	1.67	6.80	5.13	6.21	16.90	13.99	2.92	1.47	0.00