Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ARL13B Gene 0 31.08 90.71 24.91 26.27 60.31 30.50 45.43 31.89 23.88 34.77 38.46 71.16 61.30 39.59 22.25 28.99 30.99 14.92 12.81 35.45 12.09 77.30 38.43 2 478400 Transcript 0 0.00 0.05 0.02 0.00 3.65 0.00 2.18 0.71 0.00 0.00 0.00 0.00 0.00 1.06 1.80 0.00 0.00 2.29 0.00 0.00 0.00 4.52 0.00 3 303097 Transcript 0 0.00 0.00 0.00 0.00 4.33 2.90 6.05 0.00 1.79 1.34 0.00 0.00 0.00 0.00 0.00 4.36 0.00 1.82 4.24 2.88 0.00 0.00 0.00 4 394222 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 471138 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 460371 Transcript 0 0.53 7.67 0.92 0.68 0.00 1.83 0.33 0.00 1.53 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.56 0.00 1.04 0.00 7 335438 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 486562 Transcript 0 1.78 1.45 0.00 1.02 0.00 0.00 4.44 0.00 1.62 0.60 0.97 0.00 0.00 4.77 0.00 0.00 2.24 1.14 0.00 0.00 2.97 0.00 0.00 9 475206 Transcript 0 0.00 0.95 0.11 0.04 3.50 0.00 4.27 0.05 0.62 0.54 6.13 1.35 2.64 0.51 1.09 0.00 0.31 0.00 6.17 3.26 1.10 1.24 5.66 10 492165 Transcript 0 0.00 3.35 0.00 1.03 2.08 1.42 0.84 0.00 0.78 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 1.66 11 ER1a ExonRegion 0 1.59 0.00 0.00 0.00 0.00 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1b ExonRegion 0 2.12 0.34 0.00 0.00 2.23 3.36 6.40 1.44 0.00 0.00 2.26 0.00 0.00 2.44 0.00 3.96 0.00 3.08 1.59 1.77 3.31 3.13 0.00 13 ER1c ExonRegion 0 2.12 2.58 0.33 0.00 5.53 6.97 8.39 2.07 0.00 0.00 8.25 4.33 0.00 9.85 0.00 5.94 0.00 3.82 3.19 2.41 8.37 4.86 0.00 14 E1_Ae KnownBoundary 1 23.49 48.81 0.00 0.00 35.82 36.85 55.91 2.55 0.00 0.00 44.01 0.00 0.00 60.22 8.90 47.00 30.29 5.14 12.89 50.17 34.35 22.41 54.29 15 ER1d ExonRegion 1 13.86 26.94 7.78 1.16 22.61 25.58 32.97 7.61 4.94 4.36 35.18 4.33 0.00 40.03 7.11 34.48 23.44 17.65 8.28 29.68 25.78 14.48 33.18 16 E1_Af KnownBoundary 0 3.78 9.87 15.79 3.90 8.23 19.36 23.80 16.59 15.13 8.33 18.00 0.00 0.00 12.30 4.45 33.58 17.86 33.78 0.00 9.40 3.03 3.12 16.82 17 ER1e ExonRegion 1 17.28 36.86 10.67 2.73 28.76 33.77 43.80 10.37 11.17 5.83 45.50 0.18 0.00 47.30 10.52 54.86 35.21 26.02 8.10 40.51 27.55 17.19 48.58 18 ER1f ExonRegion 0 4.31 19.10 11.12 2.12 13.52 10.87 14.75 6.45 11.73 8.23 16.74 0.70 0.00 16.18 2.28 26.06 20.28 26.20 3.92 15.73 6.81 7.07 23.49 19 E1_Ag KnownBoundary 0 0.00 8.62 5.23 0.00 4.33 0.00 0.00 0.00 4.66 4.11 5.16 0.00 0.00 16.25 0.00 4.10 4.30 13.93 0.00 4.92 0.00 0.00 8.02 20 E1_Ah KnownBoundary 0 7.48 0.00 4.97 0.00 0.00 4.32 0.00 2.30 0.00 6.07 0.00 6.30 0.00 9.36 4.70 0.00 0.00 1.62 0.00 11.38 10.81 5.76 0.00 21 ER1g ExonRegion 0 4.23 4.07 7.62 0.00 2.68 0.00 0.00 2.69 3.71 8.35 4.94 4.33 0.00 13.35 1.61 3.30 5.13 11.81 0.71 6.26 5.51 4.40 5.55 22 ER1h ExonRegion 0 1.19 14.16 8.84 4.33 6.84 11.76 10.93 7.04 11.31 12.30 28.58 5.09 10.40 30.82 10.39 26.30 17.44 12.76 5.65 20.84 18.74 21.60 31.95 23 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 7.47 0.00 0.00 2.05 0.00 0.00 0.00 0.00 0.00 0.00 4.45 0.00 0.00 4.60 0.00 0.00 0.00 3.12 0.00 24 E1a_E3a KnownJunction 0 0.00 24.54 4.29 4.83 19.44 23.79 30.16 3.94 2.55 15.12 27.48 0.00 6.66 18.66 16.44 32.21 14.31 6.96 4.80 22.24 10.69 35.82 11.78 25 E1a_E3b KnownJunction 0 0.00 2.89 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E1a_E5a KnownJunction 0 0.00 6.71 0.00 2.06 4.16 2.84 1.68 0.00 1.56 2.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.33 27 E1a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 4.33 2.90 6.05 0.00 1.79 1.34 0.00 0.00 0.00 0.00 0.00 4.36 0.00 1.82 4.24 2.88 0.00 0.00 0.00 28 E2_Aa NovelBoundary 0 6.22 15.52 0.00 2.06 3.74 0.00 2.03 9.16 4.48 5.56 4.58 0.00 0.00 0.00 0.00 3.85 4.49 0.00 0.00 12.85 0.00 2.94 15.28 29 ER2a ExonRegion 0 0.00 0.15 0.06 0.00 3.48 0.00 3.18 0.09 0.00 0.00 0.00 0.00 0.00 1.06 0.94 0.00 0.00 2.26 0.00 0.00 0.00 4.74 0.00 30 E2_Da NovelBoundary 0 6.00 24.27 7.75 12.95 7.05 2.44 9.89 17.99 13.89 11.85 0.00 20.26 0.00 0.00 4.45 7.78 4.39 13.39 8.85 2.56 0.00 2.94 8.02 31 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 3.36 0.00 0.00 0.00 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.69 0.00 32 I2_AR1 ActiveIntronRegion 0 4.29 19.96 5.79 2.68 4.08 0.33 12.44 4.89 4.32 4.44 0.79 3.13 0.52 1.34 2.45 2.92 0.79 8.98 0.43 9.16 1.27 1.75 6.23 33 ER3a ExonRegion 0 2.12 34.98 7.35 4.09 21.94 19.07 32.04 5.19 2.72 12.62 28.99 6.93 11.26 24.04 8.70 32.69 16.50 9.24 3.19 19.57 14.99 46.67 11.75 34 ER3b ExonRegion 0 4.94 29.55 11.33 9.93 32.43 19.48 46.74 7.28 6.18 11.96 34.27 29.98 26.43 33.79 8.62 28.64 31.71 6.16 2.36 29.79 20.84 42.90 15.88 35 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 4.16 0.00 2.25 0.00 0.00 0.00 6.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.58 0.00 0.00 0.00 4.35 36 E3a_E4b KnownJunction 0 0.00 6.31 0.00 1.40 4.33 0.00 2.12 0.00 0.00 1.53 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.39 4.35 37 E3a_E5a KnownJunction 0 7.26 5.72 12.57 10.95 16.30 16.58 15.19 6.12 3.18 10.66 41.80 17.71 12.66 21.19 11.13 15.47 35.25 3.77 4.80 16.68 12.11 32.45 12.63 38 E3a_E6a KnownJunction 0 3.56 0.00 0.00 2.03 0.00 0.00 8.88 0.00 1.79 1.21 1.95 0.00 0.00 9.54 0.00 0.00 4.49 2.28 0.00 0.00 5.93 0.00 0.00 39 E3a_E7a KnownJunction 0 0.00 6.18 0.00 0.00 0.00 0.00 0.00 0.00 3.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.11 0.00 0.00 0.00 40 E4_Ab NovelBoundary 0 22.15 28.15 10.29 12.82 18.76 13.80 29.46 23.21 24.77 26.78 8.53 12.00 6.82 2.18 4.57 25.72 14.59 17.70 25.41 19.56 10.50 2.63 17.67 41 ER4a ExonRegion 0 0.00 1.91 0.23 0.09 2.84 0.00 6.29 0.11 1.24 1.08 5.32 2.71 5.28 1.02 2.18 0.00 0.62 0.00 8.76 6.52 2.20 2.47 6.97 42 ER4b ExonRegion 0 3.57 7.01 0.87 2.37 4.82 1.99 8.13 3.60 4.12 4.21 6.13 14.71 8.99 11.77 14.41 6.26 4.09 5.07 5.37 12.13 2.48 8.64 14.59 43 E4a_E5a KnownJunction 0 0.00 0.00 0.00 1.23 8.06 2.90 0.00 3.90 1.79 2.79 7.16 0.00 0.00 2.41 0.00 8.54 0.00 0.00 0.00 3.26 0.00 6.25 7.34 44 E5_Aa NovelBoundary 0 0.00 8.95 5.91 0.00 0.00 0.00 11.57 1.60 0.00 4.19 2.11 0.00 0.00 7.48 0.00 4.19 0.00 0.00 3.48 6.01 0.00 8.82 14.85 45 ER5a ExonRegion 1 17.08 31.10 19.44 21.79 35.55 16.85 29.82 18.50 12.01 19.46 56.84 67.75 47.67 50.07 11.24 41.73 49.97 10.20 12.39 39.52 10.32 71.97 46.01 46 E5_Da NovelBoundary 0 8.30 7.70 8.25 6.49 26.83 8.52 17.44 4.64 6.86 7.33 22.16 33.91 0.00 22.37 4.45 12.99 21.51 1.62 21.93 23.84 4.82 25.47 13.15 47 E5b_E6a KnownJunction 0 24.37 29.14 2.69 8.36 65.62 14.93 39.26 15.94 9.06 20.20 62.70 87.63 53.24 47.80 14.22 34.95 21.69 4.35 12.71 20.26 10.87 84.81 45.50 48 ER5b ExonRegion 1 20.81 35.59 6.54 11.58 50.84 16.50 34.42 17.00 9.88 18.92 63.46 81.54 49.25 54.68 8.70 32.20 29.71 3.70 20.70 25.18 13.22 74.31 60.69 49 ER5c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 0.00 50 E6_Aa NovelBoundary 0 13.78 9.47 1.21 1.50 6.62 0.00 1.63 4.19 3.96 1.45 0.00 0.00 0.00 0.00 4.70 0.00 4.39 8.08 0.00 8.82 3.09 3.12 4.01 51 ER6a ExonRegion 1 33.68 52.43 18.62 29.17 67.93 16.12 30.69 12.65 14.94 25.74 93.98 70.05 79.07 49.80 11.28 35.33 73.34 20.99 15.09 44.72 15.61 76.32 65.46 52 E6a_E7a KnownJunction 0 32.08 60.98 34.86 32.03 64.35 23.11 50.21 17.50 15.31 33.15 113.82 70.52 126.78 53.45 13.97 54.00 82.66 32.00 8.09 83.28 20.20 56.27 63.25 53 ER7a ExonRegion 1 47.38 75.92 39.48 31.63 67.91 37.14 65.51 27.53 22.98 32.49 79.16 113.91 99.48 61.68 13.92 50.67 60.33 36.70 14.33 63.66 32.13 80.05 77.93 54 E7a_E8a KnownJunction 0 63.72 160.96 36.55 27.34 83.62 65.70 77.95 41.81 32.18 44.54 53.54 143.75 158.92 80.76 24.72 56.65 68.91 54.55 32.57 48.26 37.19 105.08 106.79 55 ER8a ExonRegion 0 59.62 115.86 37.14 31.50 73.06 50.68 51.34 33.85 27.31 42.44 65.50 123.63 130.80 73.63 25.55 59.28 51.16 54.92 33.18 63.77 30.73 102.67 100.17 56 E8_Da KnownBoundary 0 68.98 120.04 41.66 37.96 83.11 39.86 42.09 31.05 20.80 41.37 82.34 142.40 128.40 56.92 43.64 71.09 37.21 58.62 22.87 70.12 27.55 108.93 89.12 57 ER8b ExonRegion 0 42.88 111.15 28.00 37.10 62.50 26.05 46.88 20.10 22.84 22.97 64.13 95.66 90.33 51.33 21.38 36.64 45.72 37.33 8.86 58.20 27.65 77.43 55.51 58 E8b_E9a KnownJunction 0 44.45 132.54 33.97 41.65 106.79 38.50 98.44 19.84 27.81 17.16 46.96 97.23 67.53 74.05 41.66 39.14 34.32 23.50 0.00 105.72 21.07 62.03 37.47 59 ER9a ExonRegion 0 53.91 107.46 31.28 43.62 94.30 48.89 68.83 34.68 42.15 37.38 73.45 116.44 106.15 66.09 25.79 69.60 66.62 31.98 26.68 70.51 20.02 113.41 85.33 60 E9a_E10a KnownJunction 0 35.93 77.03 22.77 24.51 31.07 25.44 56.40 28.38 28.01 34.44 42.17 67.82 27.27 53.45 10.75 41.61 45.44 13.22 21.27 59.57 8.09 67.05 31.76 61 E10_Aa NovelBoundary 0 6.59 8.29 5.44 9.19 24.79 13.91 18.77 7.64 8.94 6.31 0.00 11.85 0.00 0.00 4.45 0.00 0.00 1.95 0.00 15.02 0.00 0.00 4.10 62 ER10a ExonRegion 0 84.05 114.02 24.32 26.64 72.20 38.10 65.97 37.07 44.42 28.42 52.02 113.75 93.16 63.23 22.71 59.57 46.61 27.95 39.15 42.39 30.40 110.75 93.14 63 E10a_E11a KnownJunction 1 22.30 73.54 16.35 17.61 23.68 31.91 31.36 15.65 16.12 21.36 40.85 102.33 67.53 64.98 8.90 23.75 11.87 43.32 17.88 27.10 23.85 33.19 50.79 64 ER11a ExonRegion 1 13.37 72.32 14.28 12.05 29.24 37.63 37.24 13.38 14.55 23.77 46.11 82.95 53.56 85.37 16.78 42.08 30.86 34.09 15.19 37.93 34.88 54.75 52.35 65 E11_Da NovelBoundary 0 6.00 5.26 3.19 9.39 8.66 7.10 9.01 2.22 2.92 17.43 0.00 0.00 0.00 2.47 5.32 0.00 3.74 3.19 0.00 14.83 0.00 5.69 0.00 66 E11a_E12a KnownJunction 0 18.30 80.64 16.74 14.28 26.32 43.10 36.70 22.22 18.08 25.87 39.64 86.13 38.15 55.09 14.09 31.19 38.43 33.08 11.20 10.61 43.18 57.50 58.82 67 ER12a ExonRegion 0 13.63 69.30 23.66 21.70 40.39 42.52 31.17 22.30 21.65 23.23 40.27 57.95 70.19 51.05 15.93 39.19 40.31 40.81 21.10 38.15 22.56 65.19 51.62 68 E12_Da KnownBoundary 0 24.15 109.06 28.15 31.73 66.30 41.91 49.24 29.29 30.67 39.16 47.17 51.17 85.38 64.39 32.14 19.40 32.45 38.80 30.97 54.01 12.85 60.38 42.77 69 E12a_E12b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 ER12b ExonRegion 0 27.84 93.89 20.39 36.98 56.92 28.08 59.02 35.14 24.31 32.94 37.64 62.98 78.21 55.55 20.92 26.75 45.01 31.01 15.24 45.34 8.84 82.92 54.69 71 E12_Ab KnownBoundary 0 26.15 100.51 17.74 28.23 75.98 26.86 37.71 32.98 21.61 35.86 37.38 57.17 97.88 41.85 14.09 11.96 34.69 7.54 11.86 57.40 3.15 85.91 38.50 72 ER12c ExonRegion 0 26.91 102.10 19.11 27.40 63.23 32.56 51.02 33.42 23.11 38.77 22.91 82.80 68.98 31.11 19.21 16.27 18.46 5.99 8.84 25.85 4.92 88.42 21.15 73 E12_Db KnownBoundary 0 13.71 54.53 38.05 51.11 143.29 28.17 39.04 27.72 45.86 50.98 32.32 84.48 101.13 30.78 18.42 36.49 13.28 23.67 15.15 22.95 5.50 77.77 42.77 74 ER12d ExonRegion 0 17.95 55.50 35.62 42.83 66.52 31.58 46.12 49.90 51.74 59.30 50.10 123.47 96.72 61.14 53.93 47.90 34.72 18.54 34.36 39.12 13.64 131.87 51.17 75 E12_Dc KnownBoundary 1 20.52 39.86 35.48 35.73 72.07 21.81 36.57 59.84 65.28 53.46 73.39 119.14 89.77 21.37 52.29 16.83 70.50 7.50 31.06 68.01 14.39 154.12 39.10 76 ER12e ExonRegion 0 40.29 141.89 35.83 31.69 83.41 37.09 52.13 50.50 29.56 52.38 27.64 71.82 57.50 28.67 34.13 17.83 19.50 4.72 10.00 31.16 5.12 90.13 21.95 77 ER12f ExonRegion 0 1.06 9.15 1.84 1.36 0.00 3.67 0.66 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.08 0.00