Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 THOC7 Gene 0 189.02 260.54 196.54 157.43 201.05 127.35 117.48 108.09 54.86 146.24 261.28 378.80 265.43 232.33 364.16 183.57 238.96 60.69 106.77 145.76 60.61 139.02 59.91 2 295899 Transcript 1 372.66 461.36 57.67 44.73 139.21 126.44 130.93 34.53 15.71 53.11 107.42 6.84 13.79 158.05 277.93 163.88 144.91 51.93 91.74 135.13 62.14 45.03 49.88 3 469584 Transcript 1 103.57 83.41 12.74 5.06 68.17 51.11 26.37 2.38 2.69 7.33 40.75 6.30 0.00 27.72 63.29 31.02 9.35 2.20 3.86 9.78 9.27 15.37 4.35 4 464327 Transcript 0 0.01 1.52 0.82 1.19 0.41 0.27 1.18 0.77 0.27 1.26 0.29 1.63 3.00 0.57 0.43 0.90 0.97 0.00 0.01 1.91 0.01 0.93 0.01 5 498422 Transcript 0 3.39 7.82 3.40 2.94 6.80 0.97 0.20 1.27 1.06 6.38 2.42 0.29 7.39 10.96 1.75 2.41 8.64 3.50 4.10 4.69 2.88 0.40 1.40 6 473141 Transcript 0 2.40 3.85 0.69 1.15 1.02 0.01 3.00 0.49 0.33 0.97 0.01 0.64 0.68 0.79 1.55 1.12 2.51 0.52 0.00 0.81 1.25 0.00 1.66 7 394436 Transcript 0 0.00 0.38 0.00 0.00 0.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 487570 Transcript 0 1.00 0.45 1.46 1.91 1.09 0.00 1.98 0.24 0.22 0.36 0.00 0.67 4.35 0.11 0.27 1.47 1.65 0.35 0.00 0.93 0.00 0.50 0.00 9 469153 Transcript 0 0.00 0.00 0.00 0.00 0.00 2.50 0.00 0.00 0.00 1.32 0.00 6.30 13.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 IG21_SR5 SilentIntergenicRegion 0 4.33 1.72 2.38 0.00 4.47 1.33 0.62 0.00 0.40 1.79 8.05 0.36 0.00 7.72 10.14 6.33 5.63 1.07 0.00 2.42 1.37 0.27 4.39 11 IG21_AR5 ActiveIntergenicRegion 0 11.09 5.35 1.01 0.00 12.52 8.10 0.90 0.00 1.43 1.83 8.32 2.30 0.00 9.69 10.81 9.49 7.56 4.20 5.03 8.00 3.02 1.24 5.35 12 ER1a ExonRegion 0 0.65 0.06 0.00 0.00 0.00 4.74 1.07 0.00 0.00 0.00 1.93 4.81 0.00 2.08 7.66 0.99 2.11 1.13 5.49 0.00 3.55 0.00 0.00 13 E1_Ab KnownBoundary 0 6.37 0.00 1.30 0.00 4.24 13.29 5.92 5.09 1.77 0.00 4.79 13.35 0.00 2.12 10.38 15.55 4.39 2.03 9.51 0.00 8.34 0.00 0.00 14 ER1b ExonRegion 0 7.42 8.40 2.20 0.40 1.28 9.33 5.07 1.03 0.09 0.86 4.03 3.33 11.22 14.15 31.11 7.32 5.02 3.59 3.19 3.45 3.48 0.79 0.72 15 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E1a_E5c KnownJunction 1 1108.86 1359.63 170.57 130.09 393.55 370.92 382.45 98.41 47.13 155.88 316.45 7.05 31.98 455.83 814.51 490.64 432.63 154.66 269.75 403.25 182.86 130.92 149.64 17 E1a_E6a KnownJunction 0 103.57 83.41 12.74 5.06 68.17 51.11 26.37 2.38 2.69 7.33 40.75 6.30 0.00 27.72 63.29 31.02 9.35 2.20 3.86 9.78 9.27 15.37 4.35 18 ER1c ExonRegion 1 286.38 355.25 59.76 39.84 114.65 126.39 120.68 34.97 18.91 58.58 114.34 3.00 38.96 198.64 300.17 156.38 124.67 63.39 91.15 162.19 54.58 42.95 37.72 19 ER1d ExonRegion 1 684.24 889.40 134.00 89.07 294.14 284.24 267.25 66.05 40.85 118.05 229.60 7.73 46.57 335.96 606.78 368.33 309.34 120.76 166.55 280.39 138.99 98.97 106.98 20 ER1e ExonRegion 0 3.08 4.80 3.38 0.46 1.64 1.94 0.40 0.28 0.59 4.48 0.30 0.58 1.47 7.68 3.50 4.82 4.38 4.43 3.40 2.86 2.80 0.79 2.79 21 E1b_E5c KnownJunction 0 3.70 10.85 3.43 5.43 11.97 0.00 0.00 2.26 1.53 8.27 4.53 0.00 13.31 14.24 0.00 0.00 12.90 2.57 4.80 6.52 2.97 0.00 0.00 22 E2_Aa NovelBoundary 0 669.38 734.74 341.83 388.06 704.41 493.13 756.90 400.68 328.87 308.43 291.55 357.27 410.53 277.00 287.41 562.42 516.50 508.51 388.25 879.37 518.74 284.92 622.98 23 ER2a ExonRegion 0 4.80 7.70 1.38 2.30 2.04 0.03 6.00 0.97 0.66 1.94 0.03 1.28 1.35 1.59 3.09 2.25 5.01 1.04 0.00 1.62 2.50 0.00 3.33 24 E2a_E5c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER3a ExonRegion 0 0.02 4.57 2.45 3.57 1.24 0.82 3.55 2.30 0.82 3.77 0.88 4.90 9.01 1.71 1.30 2.71 2.90 0.00 0.03 5.73 0.02 2.78 0.03 26 E3a_E5c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER4a ExonRegion 0 0.00 0.38 0.00 0.00 0.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER5a ExonRegion 0 0.00 0.51 0.00 0.00 0.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.17 0.00 0.00 1.49 3.30 0.00 0.00 0.00 0.00 0.00 0.00 29 ER5b ExonRegion 0 264.56 361.98 49.83 37.71 131.11 103.92 117.83 25.93 17.29 48.17 90.85 4.33 26.58 146.17 227.26 151.58 145.24 46.19 66.89 119.86 59.50 33.34 45.03 30 ER5c ExonRegion 0 464.53 626.16 155.04 124.75 267.57 211.25 214.23 75.26 52.93 132.80 198.44 85.96 100.16 216.15 279.75 208.68 291.80 93.78 103.70 190.07 111.80 83.55 71.65 31 E5_Da NovelBoundary 1 295.46 241.08 96.83 86.34 181.58 169.56 119.90 57.50 34.11 77.12 214.95 159.50 146.74 122.02 213.49 57.85 158.58 14.67 44.24 89.29 72.84 66.81 26.12 32 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.50 0.00 0.00 0.00 1.32 0.00 6.30 13.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 E5b_E6a KnownJunction 0 447.19 321.06 191.60 138.01 170.80 207.89 127.37 130.08 68.20 196.25 317.98 169.11 307.12 203.96 279.99 120.31 265.64 37.47 41.32 182.42 135.60 102.32 26.46 34 ER5d ExonRegion 0 258.14 248.25 143.37 116.20 139.14 159.54 104.94 96.15 52.61 146.25 277.26 177.83 243.53 162.17 235.32 86.41 229.11 32.51 38.22 142.00 107.00 75.86 24.04 35 ER6a ExonRegion 0 400.72 365.60 404.25 333.91 319.52 224.71 159.58 206.63 106.91 310.77 544.02 495.05 510.00 566.41 699.11 466.11 523.63 168.92 272.25 351.46 149.71 265.45 154.49 36 E6_Da KnownBoundary 0 0.00 0.00 1.83 5.33 0.00 0.00 8.79 0.00 1.50 1.29 0.00 0.00 13.64 0.00 0.00 4.36 0.00 0.00 0.00 3.07 0.00 3.12 0.00 37 E6a_E7a KnownJunction 0 644.11 785.39 506.43 402.58 644.65 409.82 410.71 263.20 129.11 428.05 890.80 861.13 772.19 566.43 790.53 356.91 668.91 98.20 179.68 336.20 177.05 339.97 106.87 38 ER6b ExonRegion 0 1.99 0.38 2.93 3.81 1.51 0.00 3.96 0.48 0.44 0.72 0.00 1.34 7.53 0.22 0.55 1.45 0.00 0.70 0.00 1.87 0.00 1.00 0.00 39 ER7a ExonRegion 0 250.49 693.19 446.62 357.81 741.56 615.43 568.20 295.49 139.76 376.88 776.97 847.23 708.53 564.28 843.61 429.28 619.92 106.54 181.12 306.59 166.86 331.28 121.27 40 E7_Da NovelBoundary 0 99.35 464.52 315.84 264.90 473.01 419.70 356.39 202.78 109.34 241.81 340.56 607.10 403.22 274.65 590.15 207.21 300.23 52.60 145.79 210.10 53.62 242.06 85.79 41 E7b_E8a KnownJunction 0 505.72 1190.51 535.14 477.73 1083.87 602.49 495.06 337.96 155.93 391.08 730.61 1167.23 1094.57 615.05 840.47 366.40 685.93 127.93 331.30 380.69 168.59 400.77 136.32 42 ER7b ExonRegion 0 323.43 906.72 484.79 424.54 879.32 605.73 464.88 321.49 154.47 377.55 682.43 1124.58 913.09 569.76 793.31 359.44 648.63 122.53 269.76 345.21 136.91 370.22 145.00 43 ER8a ExonRegion 0 621.85 912.55 539.10 444.09 698.92 413.40 296.25 308.05 156.18 417.16 824.75 1137.83 1128.52 747.32 871.78 478.87 774.74 185.00 273.94 360.75 181.46 292.12 178.98 44 E8a_E9a KnownJunction 0 535.87 772.63 588.57 432.41 416.30 242.87 164.77 306.04 165.13 430.97 735.82 1237.60 1244.24 714.82 997.72 583.52 724.45 218.92 331.12 354.10 178.47 272.37 207.77 45 ER9a ExonRegion 0 432.23 572.20 589.58 489.60 322.01 194.12 155.75 328.30 185.27 461.27 881.34 1384.55 814.89 856.29 1398.22 807.35 776.48 212.81 509.66 417.02 170.34 529.64 231.81 46 E9b_E10a KnownJunction 0 507.42 600.75 694.89 598.99 376.83 207.72 202.27 385.52 220.43 495.07 1243.74 1308.28 790.69 767.21 1502.69 623.00 1164.66 178.79 467.59 582.73 241.49 429.86 160.06 47 ER9b ExonRegion 0 526.31 602.62 611.05 512.44 354.98 177.27 171.23 338.78 186.09 471.38 1197.11 1349.35 753.53 794.74 1356.82 669.72 1056.29 182.93 503.29 516.31 232.86 511.16 180.11 48 ER10a ExonRegion 0 462.26 520.18 574.55 445.99 383.04 192.36 228.17 311.24 181.25 420.66 959.24 1171.89 658.35 688.90 1101.84 482.09 920.95 143.44 291.43 450.20 206.74 368.71 140.66 49 E10_Da NovelBoundary 0 171.81 241.14 314.24 251.75 201.44 98.01 146.84 158.67 92.79 218.09 249.80 343.76 249.33 241.39 331.05 181.32 289.29 52.52 78.87 194.56 55.72 106.97 44.30 50 E10b_E11a KnownJunction 0 523.94 650.61 529.99 400.52 538.71 315.10 320.00 285.46 166.72 370.67 627.79 1271.81 748.17 656.66 1021.70 329.40 580.74 141.11 189.18 413.29 85.19 269.24 116.86 51 ER10b ExonRegion 0 390.21 531.13 505.41 381.36 451.23 266.40 274.54 276.40 147.99 372.33 657.36 1141.40 671.10 624.70 897.81 354.49 618.77 144.80 175.77 401.16 103.77 258.17 108.39 52 ER11a ExonRegion 0 315.13 443.13 393.07 307.44 392.91 198.10 208.34 210.27 95.29 261.42 401.46 868.14 486.96 344.43 686.07 270.93 329.21 89.24 168.99 243.88 70.49 295.96 95.45 53 ER11b ExonRegion 0 8.47 24.40 2.45 4.09 24.08 3.67 9.27 5.19 0.00 3.44 3.87 8.66 9.38 16.24 11.61 0.00 0.00 0.00 0.00 2.13 0.00 4.17 0.00