Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PPP4R2 Gene 0 71.83 160.73 84.33 105.57 156.61 88.80 130.68 75.78 51.36 135.71 143.16 291.00 141.98 136.95 98.99 94.25 119.99 41.34 43.13 88.86 40.54 143.99 64.69 2 356692 Transcript 0 44.94 130.20 44.27 66.77 96.57 44.17 58.87 36.41 19.47 71.37 15.28 75.88 25.55 22.70 22.39 11.07 11.84 9.48 12.82 29.67 6.34 46.18 15.42 3 482242 Transcript 0 3.56 0.00 0.00 1.80 3.31 2.44 3.62 0.00 1.65 1.67 2.68 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 4 470976 Transcript 1 25.37 20.61 9.43 12.07 27.69 9.61 32.29 12.34 13.71 14.63 8.38 51.69 28.38 13.85 12.84 13.91 10.79 5.05 9.13 11.93 6.56 18.71 8.36 5 488810 Transcript 0 0.00 3.35 5.53 1.73 0.00 2.50 2.25 3.82 3.30 3.33 2.68 0.00 0.00 2.12 6.30 0.00 0.00 2.53 9.60 3.26 0.00 14.39 0.00 6 394284 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 495566 Transcript 0 5.22 7.96 2.23 2.82 2.45 0.37 5.61 2.62 2.25 3.69 0.47 7.10 4.41 3.02 9.97 7.29 5.07 3.69 2.60 7.16 1.17 0.36 4.20 8 476505 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.90 0.00 1.98 1.97 1.40 2.05 0.00 0.00 0.00 9 460360 Transcript 0 19.22 27.26 16.35 33.56 46.28 24.21 31.72 17.06 13.27 32.49 55.18 83.13 64.50 48.41 26.62 22.48 41.94 11.94 7.12 20.52 15.51 32.82 16.73 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.20 0.00 0.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ac KnownBoundary 0 0.00 3.22 8.69 1.63 0.00 2.78 4.33 2.01 0.00 3.95 0.00 0.00 0.00 2.47 0.00 7.69 4.58 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1b ExonRegion 0 0.00 2.30 0.00 0.00 1.43 1.22 2.74 0.00 0.00 0.00 4.12 0.00 0.00 5.41 3.29 3.76 3.08 0.00 0.00 3.26 2.79 0.00 0.39 13 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.03 0.00 0.00 14 E1_Ae KnownBoundary 0 0.00 6.18 3.52 0.00 0.00 5.79 2.25 2.42 0.00 1.58 2.68 0.00 0.00 2.83 6.30 0.00 9.07 1.82 0.00 0.00 2.35 3.12 0.00 15 ER1c ExonRegion 0 0.00 7.46 0.00 0.00 5.35 14.41 11.92 0.00 0.00 0.00 12.24 0.00 2.68 18.79 18.93 5.94 19.18 0.44 3.03 12.77 5.35 1.98 2.94 16 ER1d ExonRegion 0 0.00 8.13 0.00 0.00 5.35 14.67 13.24 0.00 0.00 0.00 15.46 0.00 4.69 22.74 23.21 5.94 23.11 3.70 3.19 12.77 8.81 2.08 5.87 17 ER1e ExonRegion 0 3.40 3.98 10.44 3.55 4.18 6.47 4.68 4.49 3.09 10.06 9.14 13.21 6.95 17.46 7.03 7.92 14.38 2.98 3.86 7.28 4.52 1.66 3.82 18 E1_Af KnownBoundary 1 54.75 57.56 184.68 72.85 29.88 52.58 14.53 63.83 56.42 144.49 21.48 28.36 32.30 91.29 23.36 47.85 63.02 37.02 42.07 83.48 14.27 14.14 27.49 19 ER1f ExonRegion 0 46.81 89.41 170.12 71.75 70.17 63.25 65.51 81.35 68.67 178.23 114.82 54.76 52.54 159.37 83.33 152.46 161.01 78.29 64.15 125.98 93.59 57.87 64.86 20 E1a_E3a KnownJunction 0 34.75 54.99 70.16 83.81 46.77 52.36 97.42 56.11 46.73 97.75 104.24 30.01 46.91 170.29 100.75 190.55 159.70 98.16 64.66 75.42 48.68 98.95 115.92 21 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.80 0.00 0.40 1.37 2.80 1.54 0.00 0.00 0.00 22 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.55 2.57 0.00 2.56 0.00 0.00 0.00 23 ER3a ExonRegion 0 22.74 49.82 43.23 47.97 54.69 41.75 69.25 46.06 42.42 96.93 300.09 121.07 97.69 170.81 66.34 136.36 266.85 82.59 66.66 105.01 123.22 120.79 80.22 24 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E3a_E6a KnownJunction 1 56.45 60.06 197.80 186.42 92.70 75.01 98.92 114.84 138.22 223.20 411.16 114.64 101.94 177.82 78.00 128.17 334.74 76.11 58.83 178.71 177.61 154.55 87.92 26 E3a_E7a KnownJunction 1 0.00 13.22 4.08 9.72 4.16 0.00 3.93 4.60 4.92 13.59 15.00 0.00 0.00 2.12 0.00 0.00 28.42 4.44 3.76 2.68 6.05 2.69 0.00 27 I3_SR1 SilentIntronRegion 0 8.17 10.77 7.64 7.95 10.86 1.16 17.46 8.85 5.61 13.03 0.84 7.67 11.18 1.67 11.03 7.78 8.88 2.29 5.70 19.39 1.22 1.36 7.56 28 I3_AR1 ActiveIntronRegion 0 7.44 5.34 8.91 13.30 11.33 4.62 14.84 9.86 6.33 13.23 2.54 13.40 20.35 1.20 6.38 17.57 12.60 3.77 3.96 32.84 2.60 0.74 13.55 29 I3_AR2 ActiveIntronRegion 0 6.35 2.03 6.13 8.37 10.32 11.00 16.64 12.35 9.00 7.37 6.63 8.66 37.52 0.00 13.26 26.32 15.56 3.17 0.00 24.32 4.41 0.00 23.49 30 I3_AR6 ActiveIntronRegion 0 1.28 10.91 9.58 2.64 8.68 5.33 13.76 6.39 5.88 2.99 2.81 7.87 0.71 0.00 13.63 8.83 4.30 0.34 0.00 7.22 2.20 0.38 13.17 31 E4_Aa NovelBoundary 0 63.79 42.03 191.12 194.05 40.15 31.00 69.47 203.73 144.53 175.30 18.58 7.35 36.20 9.24 14.59 41.95 37.31 220.82 37.84 53.12 15.63 6.00 43.02 32 ER4a ExonRegion 0 7.76 5.98 0.00 0.04 1.94 0.00 6.68 0.00 0.02 0.02 0.00 7.91 0.00 2.00 11.77 10.73 7.37 1.29 0.00 10.95 0.00 0.09 4.34 33 E4_Da NovelBoundary 0 22.97 31.05 28.24 43.35 23.34 10.51 30.43 32.61 11.75 33.60 5.26 21.61 20.62 2.24 8.90 30.76 4.77 20.35 0.00 17.32 0.00 3.12 20.91 34 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 I4 Intron 0 25.09 15.14 14.10 18.48 37.62 3.54 31.39 12.07 7.10 20.73 0.53 9.83 5.55 3.03 10.16 21.30 9.10 12.41 5.27 15.84 1.22 1.15 12.14 36 I4_SR1 SilentIntronRegion 0 25.09 15.14 14.10 18.48 37.62 3.54 31.39 12.07 7.10 20.73 0.53 9.83 5.55 3.03 10.16 21.30 9.10 12.41 5.27 15.84 1.22 1.15 12.14 37 E5_Aa NovelBoundary 0 57.94 50.98 23.18 28.37 34.72 23.68 46.81 32.49 26.68 18.78 12.42 11.40 12.66 7.53 15.70 82.97 43.38 28.02 12.33 48.39 23.17 13.66 52.93 38 ER5a ExonRegion 1 13.10 25.86 8.93 11.24 7.86 1.49 15.75 10.50 8.99 14.76 1.88 20.50 17.62 10.10 28.10 18.43 12.91 13.47 10.38 17.67 4.67 1.36 12.46 39 E5_Da NovelBoundary 0 43.56 72.49 2.54 20.54 32.00 0.00 24.51 21.97 4.20 16.52 0.00 0.00 0.00 0.00 4.45 8.20 0.00 2.36 17.22 8.05 3.15 0.00 0.00 40 ER6a ExonRegion 0 32.01 67.18 75.93 86.90 77.44 56.57 102.56 77.83 75.54 142.52 351.56 266.43 155.70 280.74 111.21 245.90 329.68 124.66 97.27 161.61 104.12 210.70 129.21 41 E6a_E7a KnownJunction 0 80.98 160.30 243.07 194.35 174.79 194.55 180.85 131.03 147.83 271.79 364.62 546.48 395.27 223.03 97.04 162.09 306.12 64.17 70.59 258.10 79.63 349.09 156.30 42 ER7a ExonRegion 0 41.48 104.93 85.29 97.58 125.94 103.92 138.93 86.42 87.28 152.92 357.72 478.55 388.33 246.00 100.38 153.96 299.28 70.83 31.85 178.72 73.60 301.42 109.63 43 ER7b ExonRegion 0 58.22 177.00 85.26 98.59 122.41 101.28 152.66 92.33 87.77 169.83 285.90 512.47 265.97 302.11 108.04 232.43 237.87 80.37 83.42 147.13 47.31 240.26 109.18 44 E7b_E8a KnownJunction 1 122.17 311.33 299.66 216.12 209.08 235.49 261.49 175.55 146.96 348.45 385.15 963.31 446.72 461.89 155.02 351.79 265.08 86.14 151.53 276.51 53.00 299.62 139.82 45 ER8a ExonRegion 1 69.90 157.55 55.40 84.75 114.14 107.23 186.78 102.66 78.66 163.28 356.87 614.67 283.25 399.32 123.46 232.22 266.76 85.43 82.40 163.83 71.10 254.68 114.53 46 E8_Da KnownBoundary 0 3.78 14.80 5.03 12.62 10.44 10.79 67.22 20.04 13.60 9.67 6.79 26.71 6.82 11.77 13.35 15.12 16.08 1.70 0.00 11.76 0.00 19.29 0.00 47 E8a_E9a KnownJunction 0 332.28 398.28 336.83 298.13 185.06 218.00 269.61 199.91 204.60 373.43 293.97 570.34 264.27 418.92 180.11 236.52 276.39 118.64 102.31 296.83 91.25 230.24 127.53 48 E8a_E10a KnownJunction 0 0.00 3.35 5.53 1.73 0.00 2.50 2.25 3.82 3.30 3.33 2.68 0.00 0.00 2.12 6.30 0.00 0.00 2.53 9.60 3.26 0.00 14.39 0.00 49 ER8b ExonRegion 0 25.37 20.61 9.43 12.07 27.69 9.61 32.29 12.34 13.71 14.63 8.38 51.69 28.38 13.85 12.84 13.91 10.79 5.05 9.13 11.93 6.56 18.71 8.36 50 E8_Db NovelBoundary 1 149.88 18.68 10.02 23.81 50.08 4.43 32.77 17.91 14.29 22.78 24.85 47.72 35.55 19.25 8.90 46.91 7.85 14.14 8.56 12.14 7.10 22.78 12.98 51 I8 Intron 0 42.91 28.31 21.53 24.88 37.60 14.30 31.14 22.10 12.84 20.99 19.19 30.91 23.09 22.16 16.18 38.94 30.16 31.03 18.05 17.77 22.94 22.52 16.35 52 I8_AR2 ActiveIntronRegion 0 45.02 29.70 22.59 26.10 39.45 15.00 32.67 23.19 13.47 22.02 20.13 32.43 24.23 23.21 16.97 40.85 31.65 32.55 18.94 18.64 24.07 23.63 17.16 53 E9_Aa NovelBoundary 0 30.01 17.30 16.06 11.85 40.32 10.51 38.91 17.99 19.36 12.30 25.32 12.30 13.31 35.38 13.35 32.56 34.88 13.72 0.00 13.93 8.65 17.94 11.35 54 ER9a ExonRegion 1 70.75 112.69 38.48 73.31 62.33 87.46 155.31 56.12 60.90 112.04 285.99 463.54 231.31 303.82 99.03 185.98 219.75 96.11 45.06 117.82 110.74 231.10 95.58 55 E9_Da NovelBoundary 0 14.22 25.65 25.58 20.01 18.85 10.22 7.95 20.99 12.67 21.38 16.37 12.60 14.61 12.30 18.91 8.29 26.93 17.70 0.00 8.12 11.55 18.74 3.84 56 E9a_E10a KnownJunction 0 135.36 219.24 275.30 164.61 150.76 262.29 223.15 129.30 139.64 249.92 209.95 390.58 277.25 324.03 141.29 197.73 221.88 146.70 50.35 176.92 89.21 136.92 80.07 57 E9a_E10c KnownJunction 0 3.56 0.00 0.00 1.80 3.31 2.44 3.62 0.00 1.65 1.67 2.68 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 58 I9 Intron 0 18.20 18.68 22.28 13.40 21.95 5.12 23.30 12.35 11.39 10.93 15.08 18.74 18.15 12.81 12.05 16.63 15.12 11.57 4.46 8.94 5.72 16.65 4.09 59 I9_SR1 SilentIntronRegion 0 18.35 18.82 22.44 13.50 22.13 5.16 23.49 12.45 11.48 11.02 15.20 18.88 18.30 12.92 12.14 16.75 15.24 11.66 4.48 9.01 5.77 16.78 4.12 60 E10_Ab NovelBoundary 1 35.12 81.43 41.57 22.08 55.01 75.81 67.97 37.50 22.71 48.75 52.80 121.09 64.93 160.75 19.04 116.38 95.09 28.35 27.95 48.39 57.21 57.99 54.55 61 ER10a ExonRegion 1 45.51 117.44 48.91 80.07 45.93 95.97 129.53 72.16 66.08 122.43 195.38 382.80 242.32 316.03 90.91 213.25 241.52 117.33 52.03 111.17 108.35 169.11 87.61 62 ER10b ExonRegion 1 69.02 143.51 64.49 87.33 98.16 129.09 157.91 79.95 70.21 149.64 290.77 553.15 244.25 418.55 119.80 339.99 306.66 143.91 98.37 159.70 202.83 255.66 170.73 63 E10_Ac KnownBoundary 1 165.14 261.47 352.21 296.37 209.68 215.73 252.30 196.17 196.64 379.85 474.54 728.49 298.84 495.85 72.56 414.59 386.25 254.03 122.83 284.81 302.83 210.40 248.41 64 ER10c ExonRegion 1 70.73 171.98 108.44 107.68 179.94 136.11 205.38 92.80 91.09 137.44 412.42 562.24 219.56 453.21 119.31 365.72 363.51 194.08 102.72 181.56 236.61 218.90 199.73 65 E10_Da NovelBoundary 0 6.74 18.75 12.65 15.08 26.66 0.00 10.02 0.00 16.49 9.78 1.95 0.00 13.15 22.31 4.45 18.11 8.51 9.00 17.60 8.56 3.15 8.33 8.02 66 E10a_E11a KnownJunction 0 127.13 236.73 171.96 168.71 247.28 127.26 279.86 127.21 126.36 246.40 476.33 442.79 180.35 489.61 188.27 359.31 400.65 225.46 154.73 221.73 235.19 306.96 234.75 67 ER11a ExonRegion 1 60.24 165.73 93.78 110.51 165.55 148.35 232.35 83.46 75.15 139.68 416.73 444.01 203.79 435.08 130.38 355.29 355.78 186.11 115.92 179.44 206.21 219.55 201.40 68 E11_Da KnownBoundary 0 95.50 240.02 148.25 128.09 139.30 168.65 265.90 83.01 91.12 122.14 334.35 219.97 231.15 338.99 153.41 388.87 314.82 198.27 131.39 208.50 139.00 224.97 221.18 69 E11_Db KnownBoundary 0 44.90 76.89 57.92 91.80 85.57 69.16 136.42 46.13 42.71 76.91 193.21 264.54 134.41 145.74 98.15 84.93 197.19 53.18 47.34 72.42 84.70 112.42 91.59 70 ER11b ExonRegion 0 67.86 179.21 126.29 144.98 115.22 135.93 218.21 85.34 72.10 126.95 361.45 362.32 227.76 346.95 170.09 290.71 321.63 176.11 116.27 154.39 139.94 230.88 188.50 71 ER11c ExonRegion 0 86.42 130.81 70.57 99.89 162.67 130.08 207.46 90.09 74.98 143.65 382.24 467.80 252.52 347.05 157.18 245.90 338.31 109.83 86.39 156.78 136.81 235.96 183.77 72 E11_Dc KnownBoundary 0 13.11 33.15 23.15 25.40 42.11 14.82 49.68 19.10 23.26 40.70 69.70 93.93 92.53 69.16 22.13 46.14 42.08 17.37 13.46 71.59 20.94 24.37 29.96 73 E11c_E12a KnownJunction 0 133.80 93.01 60.67 98.72 198.81 105.11 168.08 107.00 73.67 125.90 376.67 346.31 287.81 246.57 132.89 321.54 368.68 126.43 160.48 154.55 106.81 408.24 131.54 74 ER11d ExonRegion 0 19.22 27.26 16.35 33.56 46.28 24.21 31.72 17.06 13.27 32.49 55.18 83.13 64.50 48.41 26.62 22.48 41.94 11.94 7.12 20.52 15.51 32.82 16.73 75 E11_Dd NovelBoundary 0 110.76 132.94 305.28 264.70 260.87 186.03 143.62 232.81 157.46 390.92 125.08 202.27 155.02 88.23 60.57 85.62 65.45 56.34 88.76 156.09 25.64 28.17 58.82 76 I11 Intron 0 10.18 24.46 5.27 17.61 15.45 7.94 31.21 4.96 1.77 15.62 35.34 68.13 54.16 23.03 15.85 12.87 23.82 3.99 1.53 16.38 2.12 24.06 8.48 77 I11_SR1 SilentIntronRegion 0 10.36 24.93 5.37 17.94 15.75 8.09 31.81 5.05 1.81 15.89 36.00 69.44 55.20 23.47 16.15 13.12 24.28 4.07 1.56 16.69 2.16 24.48 8.61 78 E12_Aa NovelBoundary 0 39.56 30.39 18.30 44.22 48.13 20.90 91.11 18.24 18.34 38.12 47.12 64.52 60.87 37.85 10.63 19.82 31.32 14.67 27.29 11.76 9.45 34.29 28.08 79 ER12a ExonRegion 0 96.97 161.69 130.95 144.85 231.63 138.21 207.53 121.46 82.35 205.70 260.49 577.30 298.17 224.98 208.97 147.24 205.72 45.65 63.84 139.33 44.52 260.96 99.82 80 E12_Da KnownBoundary 1 66.16 146.88 118.24 131.62 225.55 101.65 226.11 86.58 44.50 129.31 53.54 279.69 211.35 72.34 113.60 30.93 78.54 26.12 20.52 80.73 9.08 92.16 37.22 81 ER12b ExonRegion 1 89.88 260.40 88.54 133.55 193.15 88.33 117.73 72.81 38.93 142.75 30.56 151.77 51.10 44.20 44.77 21.35 23.69 18.96 25.64 59.34 12.67 92.35 30.83