Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC25A26 Gene 0 18.98 35.68 25.97 20.47 19.57 30.70 10.97 13.61 8.39 23.11 27.09 10.90 10.28 22.64 22.37 19.52 22.55 11.50 19.61 12.78 16.18 20.85 12.03 2 476265 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 336733 Transcript 0 15.56 17.73 38.88 11.15 12.12 11.09 5.73 12.58 4.04 16.94 31.16 14.11 20.53 24.24 21.92 30.67 25.93 18.18 20.80 14.00 17.01 21.33 20.11 4 441720 Transcript 0 3.56 32.49 7.04 6.23 3.99 2.50 2.12 1.73 6.89 4.81 4.69 24.76 13.64 4.47 0.00 23.50 0.00 3.36 4.24 4.92 2.66 0.00 3.93 5 413054 Transcript 0 1.02 2.54 0.73 0.65 0.90 0.59 0.21 0.62 0.15 0.29 1.44 0.85 1.00 1.76 0.33 0.95 2.29 1.62 0.26 1.18 0.71 0.18 1.18 6 354883 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 483224 Transcript 0 7.62 6.05 4.63 6.12 2.92 11.41 5.56 2.72 0.70 8.42 8.70 0.00 0.90 6.46 5.46 4.52 4.47 0.01 0.01 8.28 0.00 4.59 1.73 8 464350 Transcript 0 1.32 3.77 3.02 4.11 2.59 2.32 1.20 2.67 1.34 4.47 2.08 0.35 1.66 2.20 0.48 1.03 2.29 1.39 2.39 1.63 1.69 1.94 1.66 9 484768 Transcript 0 3.19 2.81 0.00 0.69 1.16 0.00 0.66 1.64 0.59 0.00 2.53 0.00 0.00 3.34 1.73 1.45 0.00 1.44 4.36 0.00 0.95 2.88 0.00 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2a ExonRegion 0 4.92 1.08 0.43 0.00 2.68 4.48 0.78 0.00 0.07 0.20 3.01 0.00 0.00 1.96 1.45 0.35 0.58 0.00 0.37 0.38 1.88 2.51 2.33 12 E2_Ab KnownBoundary 0 7.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 4.95 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 3.09 3.12 4.35 13 ER2b ExonRegion 0 69.77 129.83 23.90 9.68 47.40 164.82 41.63 3.65 6.85 17.75 53.31 3.39 4.12 51.04 49.50 61.12 47.10 15.09 53.15 26.31 42.35 46.89 37.82 14 E2a_E3a KnownJunction 0 13.56 19.67 30.69 4.40 10.95 8.86 5.83 9.57 1.79 6.85 9.90 6.30 20.13 7.53 0.00 0.00 9.07 12.31 0.00 9.20 14.58 3.12 6.74 15 E2a_E4a KnownJunction 0 3.56 32.49 7.04 6.23 3.99 2.50 2.12 1.73 6.89 4.81 4.69 24.76 13.64 4.47 0.00 23.50 0.00 3.36 4.24 4.92 2.66 0.00 3.93 16 ER3a ExonRegion 0 21.48 26.42 48.89 19.12 15.49 12.02 7.08 16.82 5.62 28.14 52.55 13.24 24.97 41.78 43.46 47.72 49.45 21.64 42.83 21.60 26.63 49.01 34.08 17 E3a_E4a KnownJunction 0 22.30 23.75 75.51 21.08 19.35 19.02 9.23 23.95 8.65 32.58 59.17 36.91 37.01 45.68 42.77 74.60 44.60 38.76 40.00 24.80 24.96 30.68 37.30 18 ER4a ExonRegion 0 36.54 173.00 76.61 41.25 46.80 86.74 33.86 33.20 16.38 55.61 124.81 33.38 30.06 77.91 76.57 71.28 86.21 31.95 62.66 33.17 53.67 63.47 28.99 19 E4a_E6a KnownJunction 0 56.08 289.03 98.22 61.53 16.04 80.07 39.08 20.54 26.36 83.46 105.13 44.26 25.97 83.70 143.15 74.60 56.76 46.43 24.66 41.42 58.13 76.73 32.10 20 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER6a ExonRegion 0 69.42 181.69 112.94 61.33 64.83 156.55 37.23 41.10 31.40 76.83 110.64 87.25 48.37 101.45 93.53 96.72 68.38 57.21 72.20 46.32 50.01 88.04 40.44 23 E6a_E7a KnownJunction 0 114.17 209.77 163.48 88.23 115.03 393.24 70.62 49.58 34.81 113.81 119.93 136.54 68.50 125.32 146.98 116.04 88.64 42.99 131.77 77.47 76.11 168.39 78.79 24 ER7a ExonRegion 0 82.76 168.91 155.62 96.03 78.21 229.80 59.27 41.27 29.90 104.66 145.53 75.13 50.81 147.90 116.11 103.22 93.73 40.30 102.40 63.08 78.42 134.60 51.51 25 E7a_E8a KnownJunction 0 9.48 6.64 2.57 12.09 3.31 21.41 9.94 2.46 1.10 6.07 7.21 0.00 0.00 12.01 4.45 8.20 3.74 0.00 0.00 8.44 0.00 2.94 3.93 26 E7a_E9a KnownJunction 0 94.68 170.30 129.24 74.05 93.72 103.97 44.38 33.85 23.38 70.73 166.36 50.12 27.92 95.94 119.79 107.15 109.86 38.97 82.45 41.35 78.89 105.81 31.67 27 E7a_E11a NovelJunction 0 3.78 16.77 11.21 3.90 4.33 9.71 0.00 2.26 1.74 2.66 2.68 7.05 0.00 2.47 0.00 7.43 9.54 0.00 0.00 3.26 3.15 2.33 0.00 28 E8_Aa NovelBoundary 0 14.89 0.00 0.00 0.00 0.00 0.00 0.00 3.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.50 0.00 0.00 0.00 9.20 0.00 0.00 0.00 29 ER8a ExonRegion 0 9.61 8.47 6.23 6.27 1.29 9.92 6.73 5.69 1.00 9.13 9.10 0.00 2.70 4.91 3.04 5.35 9.67 0.02 0.04 7.01 0.00 4.78 1.28 30 E8a_E9a KnownJunction 0 3.78 3.03 5.09 0.00 4.16 2.90 0.00 0.00 0.00 10.05 9.79 0.00 0.00 2.47 8.90 0.00 0.00 0.00 0.00 9.40 0.00 6.06 0.00 31 ER9a ExonRegion 0 78.97 145.38 114.86 59.09 69.81 81.67 29.39 31.61 24.07 78.45 123.83 53.11 26.99 103.37 90.58 75.03 69.83 49.81 67.10 41.84 56.95 93.90 31.13 32 E9a_E10a KnownJunction 0 0.00 9.87 3.67 1.83 0.00 4.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 E9a_E11a KnownJunction 0 75.49 145.50 67.56 40.55 57.39 79.78 25.92 22.10 14.35 54.72 72.70 44.71 28.08 115.96 87.27 57.08 30.11 45.47 14.40 43.85 37.68 81.69 26.80 34 E9a_E12a KnownJunction 0 9.56 8.42 0.00 2.06 3.48 0.00 1.99 4.93 1.77 0.00 7.58 0.00 0.00 10.01 5.19 4.36 0.00 4.31 13.08 0.00 2.84 8.63 0.00 35 E10_Aa NovelBoundary 0 0.00 6.71 0.00 0.00 0.00 5.79 6.76 2.34 0.00 1.42 0.00 25.81 13.47 0.00 0.00 4.19 0.00 1.70 0.00 2.56 0.00 5.57 0.00 36 ER10a ExonRegion 0 0.04 2.18 1.50 0.63 0.00 1.43 0.00 0.00 0.00 1.08 1.54 0.00 7.30 3.88 0.00 2.70 0.00 0.03 0.00 0.04 0.00 0.00 0.00 37 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.78 0.00 0.00 0.00 1.50 2.05 0.00 0.00 5.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER11a ExonRegion 0 69.54 166.35 133.16 67.00 43.00 92.84 28.18 37.16 21.23 87.98 91.01 51.83 30.28 115.82 91.89 62.16 67.86 47.96 71.72 48.42 56.16 82.78 28.23 39 E11_Da NovelBoundary 0 2.96 3.03 3.46 5.03 3.14 2.67 3.67 0.00 0.00 2.79 2.68 0.00 6.82 2.47 0.00 0.00 8.60 0.00 3.86 0.00 8.77 0.00 4.27 40 E11a_E12a KnownJunction 0 148.32 394.01 196.39 96.69 87.61 189.95 43.68 54.75 27.23 108.17 176.10 69.77 82.62 136.38 133.26 122.62 126.32 64.00 151.72 75.10 104.28 141.02 71.02 41 I11_AR2 ActiveIntronRegion 0 11.03 4.77 4.94 7.27 7.88 3.14 4.21 1.64 1.76 4.08 3.84 7.97 5.62 4.40 1.37 2.36 3.81 2.16 2.28 3.13 2.01 4.81 2.34 42 E12_Aa NovelBoundary 0 75.72 12.83 24.95 9.86 16.30 0.00 8.83 4.27 1.79 4.43 8.00 0.00 0.00 7.53 4.70 4.36 4.77 4.23 9.60 3.26 6.18 6.25 0.00 43 ER12a ExonRegion 0 65.22 212.46 120.90 54.81 36.47 117.25 33.79 48.74 19.02 76.17 146.42 57.82 57.29 119.19 125.83 86.01 79.17 54.27 92.77 52.05 80.22 102.83 36.23 44 E12a_E13a KnownJunction 0 52.97 150.83 97.36 46.25 20.12 114.48 32.19 35.16 15.80 78.06 97.71 24.91 6.82 84.29 89.87 103.48 77.70 60.52 92.43 41.99 71.72 90.14 30.82 45 ER13a ExonRegion 0 56.16 129.53 99.32 54.44 19.45 97.42 20.17 34.35 21.17 84.83 89.91 35.64 13.23 121.34 133.51 91.61 78.75 48.64 55.35 53.34 59.89 63.47 28.37 46 E13_Da NovelBoundary 0 49.42 91.23 75.34 47.61 10.36 64.11 16.61 28.34 19.56 56.57 40.54 16.66 5.84 44.56 82.08 51.78 20.29 26.86 21.55 62.51 27.80 38.88 25.44 47 E13_Db NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 0.00 2.37 5.25 0.00 6.95 0.00 0.00 0.00 6.43 4.05 3.26 9.45 5.76 0.00 48 E13b_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 E13b_E15a KnownJunction 0 71.20 126.16 62.56 42.65 41.17 96.65 28.84 36.15 28.04 70.94 81.65 31.96 0.00 104.30 129.30 48.53 58.63 38.84 35.95 64.94 40.16 47.58 31.76 50 ER13b ExonRegion 0 50.91 105.29 74.54 44.07 21.41 81.20 22.73 36.01 26.14 75.82 76.89 27.66 3.65 85.18 117.18 50.03 54.10 30.80 35.57 65.48 41.99 45.72 31.98 51 ER14a ExonRegion 0 3.07 4.81 2.20 1.96 2.70 1.76 0.64 1.86 0.44 0.87 1.69 2.55 2.99 5.29 1.00 2.86 3.32 4.85 0.77 3.55 2.12 0.53 3.53 52 E14_Da NovelBoundary 0 3.56 3.35 3.46 5.29 0.00 5.05 5.61 0.00 1.27 1.40 2.68 19.81 0.00 14.54 0.00 6.84 8.79 6.47 0.00 2.94 3.15 0.00 0.00 53 E14a_E15a KnownJunction 0 0.00 2.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 0.00 0.00 0.00 0.00 3.55 0.00 0.00 0.00 0.00 0.00 0.00 54 I14_SR3 SilentIntronRegion 0 12.81 7.49 5.57 3.62 7.67 2.58 3.18 3.84 1.68 3.34 4.47 1.57 1.87 3.94 4.66 3.40 4.38 4.61 1.96 4.93 4.65 5.53 3.10 55 E15_Aa NovelBoundary 0 25.78 6.45 1.36 3.73 4.24 10.96 6.09 2.09 6.66 2.71 9.11 0.00 0.00 0.00 0.00 7.78 4.77 1.99 0.00 5.56 0.00 12.25 0.00 56 ER15a ExonRegion 0 40.74 65.22 57.73 30.88 37.66 75.48 17.12 28.92 23.08 63.67 82.35 18.39 11.44 70.51 79.62 53.38 60.27 21.83 32.61 38.44 49.21 59.70 23.04 57 E15_Da KnownBoundary 0 73.72 53.41 40.15 22.41 58.40 46.56 8.66 24.60 17.25 40.51 52.33 12.30 6.82 39.56 39.56 26.15 31.79 10.82 31.62 24.93 34.16 16.53 16.73 58 E15_Db KnownBoundary 0 11.19 3.35 9.17 6.19 4.33 5.74 9.01 5.09 3.56 6.66 8.05 0.00 0.00 2.47 0.00 4.36 0.00 0.00 9.60 3.26 0.00 3.12 8.54 59 E15b_E15b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 E15_Dc KnownBoundary 0 22.97 27.69 16.62 22.27 11.38 44.07 10.07 4.56 9.98 16.73 14.64 0.00 13.47 11.65 0.00 12.48 26.74 6.43 26.73 16.11 11.43 22.84 7.68 61 ER15b ExonRegion 0 43.39 42.56 41.14 34.46 33.06 48.99 14.00 23.46 21.44 41.94 46.39 12.99 9.72 33.29 34.19 29.08 33.72 11.75 39.36 27.66 21.56 21.88 17.62 62 ER15c ExonRegion 0 48.68 49.03 35.26 34.83 30.03 53.79 18.09 21.13 19.62 37.47 39.73 11.55 14.07 23.82 17.73 30.05 31.54 11.09 38.93 26.24 20.57 26.85 19.90 63 ER15d ExonRegion 0 31.21 42.95 24.65 18.26 36.77 51.00 15.66 15.14 12.57 21.39 25.96 20.51 27.12 25.44 19.74 24.68 23.20 15.97 15.00 15.05 9.79 18.24 11.76 64 E15_Ab KnownBoundary 0 56.97 94.13 30.75 14.38 93.21 47.81 19.48 20.45 6.97 20.68 36.06 13.35 34.58 21.19 19.66 32.21 22.63 13.39 20.89 14.25 17.54 5.08 19.04 65 ER15e ExonRegion 0 32.51 48.58 20.82 11.73 53.14 50.85 29.54 16.25 7.79 18.70 33.70 23.95 22.23 27.08 22.20 17.09 18.15 14.64 17.73 18.66 12.26 10.83 9.54 66 E15_Dd KnownBoundary 0 18.08 28.55 17.89 15.85 63.50 43.72 24.78 10.47 9.92 25.65 11.85 25.66 13.64 12.77 44.75 12.13 8.51 23.50 4.33 16.55 3.15 9.25 7.77 67 E15d_E16a KnownJunction 0 0.00 3.22 1.83 1.50 4.33 0.00 0.00 4.44 1.33 9.05 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 5.75 0.00 6.18 0.00 68 ER15f ExonRegion 0 22.24 28.86 24.15 25.27 28.41 29.29 11.49 14.01 9.19 19.91 17.15 12.87 12.21 15.82 18.31 13.67 10.34 5.56 16.54 8.14 5.15 20.27 6.36 69 E15_De NovelBoundary 0 28.97 2.63 26.43 12.22 11.63 4.60 3.27 23.37 10.42 11.55 21.32 6.30 0.00 2.24 0.00 3.50 4.30 0.00 4.52 2.62 2.84 92.83 12.21 70 E15_Df NovelBoundary 0 31.56 2.96 30.45 14.32 14.86 2.44 11.70 37.99 20.83 29.36 32.38 11.85 27.76 0.00 5.07 3.59 31.88 1.58 25.69 7.86 2.90 127.98 33.21 71 ER15g ExonRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 72 E16_Aa NovelBoundary 1 122.61 31.24 69.84 63.13 116.72 134.35 59.62 50.11 51.30 31.78 136.72 104.43 155.35 37.32 46.48 28.28 256.47 10.49 45.74 5.88 141.78 165.94 195.31 73 ER16a ExonRegion 0 1.42 1.71 2.72 4.31 1.70 2.12 1.62 3.23 0.66 5.16 2.03 1.12 0.91 1.65 1.10 1.07 2.21 2.70 5.43 2.28 2.67 1.78 3.58 74 E16_Da NovelBoundary 0 3.78 3.22 0.00 13.85 0.00 0.00 2.12 4.85 1.71 3.84 0.00 0.00 15.42 4.89 13.85 4.36 0.00 2.03 4.80 0.00 2.47 0.00 3.41 75 E16a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.16 1.26 2.37 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 76 Ix Intron 0 10.74 3.44 4.86 6.71 5.61 4.88 4.16 6.85 4.60 8.54 9.19 0.29 0.62 3.70 2.68 3.11 7.18 4.81 10.52 5.49 12.60 6.88 3.55 77 Ix_AR1 ActiveIntronRegion 0 11.59 3.71 5.18 6.91 6.13 4.90 4.22 7.50 4.91 8.80 9.10 0.33 0.61 3.87 2.42 3.28 7.30 5.30 9.91 5.62 11.94 7.57 4.06 78 Ix_SR1 SilentIntronRegion 0 4.98 1.61 2.64 5.51 2.01 4.87 3.88 2.39 2.47 6.94 10.22 0.00 0.74 2.63 4.70 1.99 6.56 1.41 15.21 4.65 17.86 2.17 0.00 79 Ix Intron 0 10.28 3.59 4.84 11.66 9.45 11.94 8.77 7.96 6.30 8.30 16.00 4.81 10.00 6.93 3.88 6.89 28.42 6.08 12.66 3.76 15.31 21.16 25.29 80 Ix_AR1 ActiveIntronRegion 0 10.32 3.61 4.86 11.71 9.49 12.00 8.81 8.00 6.33 8.34 16.07 4.83 10.04 6.96 3.90 6.92 28.55 6.11 12.71 3.77 15.38 21.25 25.40 81 Ix Intron 0 11.00 4.70 6.92 17.67 9.46 9.20 4.83 8.92 5.98 11.97 9.49 1.93 4.60 2.33 1.05 2.47 16.32 5.90 11.27 3.38 12.33 14.36 16.75 82 Ix_AR1 ActiveIntronRegion 0 13.96 5.51 7.93 21.50 11.04 10.50 5.59 11.23 8.16 12.07 10.33 0.86 5.82 2.17 1.12 3.28 19.40 7.08 13.20 4.39 13.46 15.33 19.36 83 Ix_SR2 SilentIntronRegion 0 5.38 4.00 7.72 18.37 11.82 11.52 2.18 5.72 4.83 13.85 7.75 3.14 6.69 3.04 2.26 2.97 11.68 2.75 15.93 2.02 5.41 13.27 10.97 84 E17_Aa NovelBoundary 1 10.82 11.58 60.11 40.15 44.40 73.37 27.95 39.55 69.85 52.27 173.57 123.34 213.30 21.25 38.82 38.28 243.20 49.83 106.26 8.31 272.13 195.52 313.54 85 ER17a ExonRegion 0 9.07 13.14 14.43 24.62 14.70 7.31 7.98 13.71 7.57 17.69 8.65 1.70 5.09 1.88 2.72 4.49 16.14 6.76 13.65 4.99 10.85 7.54 9.74