Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TFG Gene 0 101.99 138.78 123.81 110.98 121.10 98.36 106.01 95.08 106.57 138.24 256.50 384.42 360.29 244.76 281.25 200.96 210.95 130.40 111.15 121.41 216.93 322.23 169.00 2 418917 Transcript 0 3.76 10.73 1.57 1.14 1.93 8.97 2.72 1.25 1.30 0.76 3.11 0.00 0.00 9.93 0.81 7.60 6.97 2.57 2.48 0.00 4.28 8.10 0.16 3 490574 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 240851 Transcript 0 8.03 6.50 0.81 1.78 5.53 14.77 9.32 0.80 0.33 1.35 12.08 1.08 0.00 12.04 9.59 9.68 5.23 12.69 3.77 5.35 6.37 3.18 8.88 5 479672 Transcript 0 5.34 5.47 1.25 4.67 1.38 1.43 4.43 3.76 3.75 1.85 6.59 7.42 5.14 2.37 3.00 2.02 1.72 3.29 4.41 2.73 2.68 2.28 4.91 6 406587 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 443578 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 476228 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 463568 Transcript 0 0.54 1.04 1.87 0.00 0.64 0.49 1.35 0.01 0.94 0.87 1.98 0.00 0.00 1.60 1.23 2.76 0.84 3.44 0.83 0.55 3.51 1.58 0.00 10 487505 Transcript 0 1.66 1.59 2.96 3.02 3.73 7.44 6.62 0.81 5.61 4.34 0.76 0.56 7.03 5.98 3.06 3.03 1.29 7.05 8.36 3.99 5.62 2.29 5.51 11 481203 Transcript 1 20.37 30.75 10.97 29.36 31.94 20.87 31.96 18.50 22.35 19.79 36.85 115.90 79.16 39.73 17.47 30.64 34.44 16.31 8.94 26.13 28.78 73.28 31.44 12 ER1a ExonRegion 0 3.76 10.73 1.57 1.14 1.93 8.97 2.72 1.25 1.30 0.76 3.11 0.00 0.00 9.93 0.81 7.60 6.97 2.57 2.48 0.00 4.28 8.10 0.16 13 ER1b ExonRegion 0 17.43 56.85 5.84 2.29 4.27 27.27 5.97 2.02 5.57 2.49 24.31 9.95 4.19 21.04 30.12 33.39 39.89 7.00 13.96 2.04 9.38 9.84 10.00 14 E1a_E4a KnownJunction 0 12.74 28.55 11.44 3.96 3.31 19.93 8.88 1.85 6.77 3.79 15.32 32.11 6.82 2.41 4.45 8.54 11.78 6.72 7.34 5.37 5.44 2.33 7.34 15 ER1c ExonRegion 0 16.23 45.42 7.96 4.09 3.12 21.09 5.52 3.46 6.79 3.44 24.16 25.98 9.38 8.66 11.12 24.77 24.21 9.85 10.09 4.26 8.08 5.56 9.30 16 ER1d ExonRegion 0 11.82 10.96 1.61 2.19 7.05 28.63 18.63 1.60 0.66 0.98 23.19 0.00 0.00 24.08 19.18 19.36 10.47 25.37 7.54 10.69 12.74 6.35 17.76 17 E1_Ad KnownBoundary 0 46.30 49.33 3.10 3.83 26.40 77.11 57.94 6.08 1.50 2.55 56.96 0.00 0.00 40.14 28.43 59.81 36.93 58.82 23.15 34.52 28.97 17.15 50.28 18 ER1e ExonRegion 1 36.68 50.49 7.19 9.09 25.99 74.30 73.04 10.20 8.47 8.39 70.69 1.42 0.00 80.51 49.69 74.22 54.09 91.62 51.42 60.03 88.43 61.08 99.30 19 E1_Ae KnownBoundary 1 85.05 105.18 16.97 29.23 73.51 133.79 166.67 25.63 25.98 28.61 147.20 6.00 0.00 131.62 112.24 152.01 138.10 174.93 124.33 158.13 246.00 199.68 242.60 20 ER1f ExonRegion 1 36.81 43.99 15.21 18.43 29.20 49.39 59.81 19.24 17.13 23.64 92.65 1.79 5.10 100.55 64.46 86.64 76.49 96.73 62.53 64.94 157.23 119.35 126.72 21 E1_Db KnownBoundary 0 24.60 17.17 5.09 8.62 22.41 4.60 23.41 4.64 9.43 14.99 68.12 0.00 0.00 32.20 4.33 40.25 47.97 22.43 22.31 28.70 89.08 45.93 45.33 22 E1b_E4a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 10.20 2.09 0.00 1.64 2.32 0.00 0.00 0.00 0.00 4.10 0.00 0.00 0.00 0.00 0.00 2.45 0.00 23 E1_Af KnownBoundary 0 0.00 0.00 3.67 0.00 0.00 0.00 0.00 5.09 5.32 16.41 0.00 0.00 6.82 0.00 0.00 3.59 0.00 7.09 0.00 6.07 3.15 0.00 0.00 24 E1_Ag KnownBoundary 0 6.45 11.58 12.36 5.73 3.90 25.10 25.66 8.75 12.53 12.84 23.69 0.00 0.00 54.15 5.32 37.17 44.60 16.71 20.14 19.30 22.55 28.11 27.23 25 ER1g ExonRegion 0 8.47 8.25 10.62 7.80 4.91 9.47 12.80 9.70 11.05 24.08 45.32 0.00 9.38 46.11 26.92 29.89 27.51 17.66 15.93 24.47 48.73 23.84 25.12 26 ER1h ExonRegion 0 4.84 9.88 11.03 6.81 0.00 18.86 21.56 8.64 10.06 20.81 37.83 0.00 14.07 86.31 44.76 39.49 49.04 6.86 13.65 32.22 32.43 26.49 20.56 27 ER1i ExonRegion 1 8.41 26.30 9.27 11.74 5.48 18.41 14.88 8.69 8.03 23.53 84.92 12.51 13.51 124.59 87.20 60.93 102.30 30.13 32.94 61.86 141.53 82.67 46.50 28 E1_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 0.00 0.00 0.00 0.00 0.00 0.00 3.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E1c_E3a KnownJunction 0 3.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 E1c_E4a KnownJunction 0 14.22 85.05 21.05 43.12 12.99 12.55 34.84 29.16 25.23 49.00 122.82 84.03 55.03 157.75 145.00 102.88 153.53 122.66 117.37 91.72 179.90 272.24 168.17 31 ER1j ExonRegion 0 1.08 2.07 3.74 0.00 1.28 0.97 2.70 0.02 1.89 1.74 3.96 0.00 0.00 3.20 2.47 1.16 1.68 2.73 1.66 1.11 4.67 3.17 0.00 32 E1d_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 4.15 0.00 0.00 2.35 0.00 0.00 33 ER2a ExonRegion 0 3.31 3.18 4.83 3.98 3.14 7.16 4.80 1.61 3.88 6.33 1.51 1.12 7.24 4.89 6.11 6.05 2.58 9.71 8.25 7.99 8.15 4.59 11.03 34 E2a_E4a KnownJunction 0 0.00 0.00 1.09 2.06 4.33 7.72 8.44 0.00 7.35 2.36 0.00 0.00 6.82 7.06 0.00 0.00 0.00 4.39 8.47 0.00 3.09 0.00 0.00 35 ER3a ExonRegion 0 5.81 7.59 3.76 5.59 4.15 1.38 9.94 6.79 6.67 1.62 7.36 15.95 15.41 4.64 4.56 6.07 5.15 3.41 8.81 5.64 8.03 3.72 11.06 36 E3a_E4a KnownJunction 0 6.67 8.81 0.00 8.42 0.00 2.90 3.36 4.48 3.44 3.95 12.42 6.30 0.00 2.47 4.45 0.00 0.00 6.47 4.42 2.56 0.00 3.12 3.67 37 ER4a ExonRegion 0 115.86 247.27 186.64 172.11 206.03 204.31 211.32 163.53 221.93 260.36 463.57 660.21 582.68 423.62 418.75 311.61 362.01 153.98 207.32 255.79 229.39 697.06 250.64 38 E4a_E5a KnownJunction 0 147.66 271.53 276.04 243.99 343.04 268.25 283.57 267.97 340.97 403.90 744.98 1547.90 1209.17 586.68 856.17 371.70 496.12 123.53 233.32 340.61 207.88 1286.70 299.80 39 ER5a ExonRegion 0 239.92 491.74 343.28 346.29 310.58 261.03 279.37 270.42 380.09 442.49 778.38 1728.28 1370.10 638.84 663.39 464.71 581.67 171.95 285.55 372.92 315.55 1224.29 342.26 40 E5a_E6a KnownJunction 0 588.33 838.93 381.71 418.76 436.33 391.14 360.32 300.21 386.57 491.98 835.74 2123.79 1628.95 727.77 866.31 551.05 674.71 212.61 459.87 466.47 433.86 1527.84 484.86 41 ER6a ExonRegion 0 235.40 652.59 324.24 293.37 363.01 353.59 375.62 235.96 323.43 414.66 866.09 1894.68 1449.86 684.35 723.60 441.78 730.71 194.76 262.13 425.08 507.79 1154.41 407.74 42 E6_Da NovelBoundary 0 204.55 514.65 352.32 345.08 371.14 332.65 421.93 243.49 327.17 414.59 764.09 1915.22 1657.68 757.20 752.95 574.64 686.68 251.29 251.58 328.21 561.49 1154.37 436.97 43 E6b_E7a KnownJunction 1 224.48 538.13 418.67 359.79 408.40 290.51 317.13 216.34 381.56 491.33 908.12 2510.32 1845.17 802.82 683.11 728.10 681.16 398.41 394.46 553.52 539.25 1003.07 562.12 44 ER6b ExonRegion 0 169.67 454.84 362.34 318.05 328.40 288.58 314.97 218.88 341.96 433.84 854.73 2254.21 1748.29 767.61 685.18 642.08 689.23 348.49 306.54 395.32 559.37 987.59 505.20 45 ER7a ExonRegion 0 176.88 439.40 428.20 355.30 310.48 232.89 220.98 255.35 393.91 497.65 962.20 2508.46 2262.86 864.21 909.59 940.36 820.63 495.69 529.57 486.93 602.95 1365.49 806.90 46 E7_Da KnownBoundary 0 188.70 511.36 486.29 485.22 347.88 238.84 301.90 367.33 444.21 554.57 1123.34 2316.45 2143.20 928.96 1253.11 1007.77 977.46 558.17 596.06 555.70 789.89 1819.86 1056.80 47 ER7b ExonRegion 0 318.93 369.11 448.74 354.89 347.22 277.98 321.96 285.79 398.38 497.25 1112.71 1731.91 1336.08 836.02 971.32 637.50 929.36 382.31 393.94 447.48 932.89 1211.58 565.12 48 E7_Db KnownBoundary 0 802.73 480.84 445.96 363.46 541.17 362.92 401.79 268.42 360.36 484.89 893.96 1917.47 1416.79 882.34 891.03 705.63 728.94 422.29 247.35 425.43 968.92 989.35 523.96 49 ER7c ExonRegion 0 403.61 469.36 404.61 329.70 338.33 323.77 309.73 274.49 358.08 491.64 845.64 1777.13 1390.46 798.21 873.12 712.73 702.45 550.12 289.60 408.39 913.38 897.77 547.60 50 E7c_E8a KnownJunction 0 375.47 705.80 417.81 353.93 351.53 401.42 378.87 296.39 364.26 503.42 830.05 1683.40 1340.98 810.06 964.96 800.30 729.22 651.48 412.06 477.97 837.21 904.79 658.75 51 I7_SR2 SilentIntronRegion 0 11.86 6.10 6.02 13.00 5.35 2.20 7.68 6.44 8.47 2.91 25.71 84.77 48.22 19.41 11.06 18.13 31.03 9.75 8.28 15.53 16.97 26.88 13.51 52 ER8a ExonRegion 0 362.10 621.06 390.81 294.44 279.92 339.24 316.55 248.05 330.46 403.03 827.10 1344.01 1364.36 774.35 987.73 800.86 749.18 645.12 423.06 418.80 1029.32 969.87 724.19 53 E8_Da NovelBoundary 0 205.00 223.25 185.24 118.17 94.65 108.29 116.24 93.24 145.31 169.47 368.15 408.13 410.20 334.04 261.20 401.09 331.37 271.52 191.91 198.02 554.02 354.73 332.23 54 E8a_E9b KnownJunction 0 133.28 199.90 130.72 93.53 91.09 76.21 81.52 61.90 91.46 119.51 328.19 391.48 437.63 319.44 263.68 371.01 305.84 201.84 165.84 208.95 391.05 268.75 248.24 55 E8b_E9b KnownJunction 0 309.83 252.98 302.15 177.47 165.03 162.12 124.27 189.27 201.01 242.72 452.22 792.56 761.15 535.11 641.45 519.52 433.29 501.71 251.11 261.74 593.74 514.12 535.40 56 ER8b ExonRegion 0 225.23 260.30 262.74 151.05 127.77 160.00 117.61 164.78 188.97 233.78 508.84 714.72 755.10 521.61 543.02 529.29 462.13 435.45 258.55 268.97 661.30 515.50 483.81 57 I8 Intron 0 6.27 11.05 3.78 9.31 7.12 5.66 13.24 4.62 8.20 5.02 20.75 98.93 80.46 31.80 7.74 20.66 27.20 8.57 6.60 24.50 17.04 44.72 18.18 58 I8_SR1 SilentIntronRegion 0 8.37 16.28 3.80 10.90 8.06 3.93 14.81 5.79 7.86 4.59 19.80 91.97 70.98 35.89 8.64 25.08 31.29 10.17 5.76 24.38 21.25 35.73 19.16 59 I8_AR2 ActiveIntronRegion 0 6.77 9.85 4.63 15.81 9.71 8.01 14.07 5.24 11.04 5.82 28.48 104.15 92.70 32.32 9.75 23.04 35.35 13.52 10.13 35.97 26.74 51.99 18.44 60 I8_AR3 ActiveIntronRegion 0 10.58 12.20 8.58 19.53 9.37 22.31 28.24 5.19 17.50 8.03 27.70 158.03 104.74 29.50 2.90 15.85 24.76 5.54 6.37 29.08 3.67 52.09 8.32 61 I8_SR2 SilentIntronRegion 0 6.06 10.10 8.26 11.61 4.90 7.16 14.21 4.23 12.83 5.37 22.69 142.20 132.76 38.28 11.64 13.41 21.32 8.14 10.78 19.34 4.42 55.78 13.92 62 I8_AR5 ActiveIntronRegion 1 4.62 3.65 1.50 3.01 4.40 6.34 11.64 2.12 4.54 3.37 9.44 115.04 96.40 19.76 5.33 12.69 15.09 1.36 2.62 17.48 4.34 34.14 12.08 63 E9_Aa NovelBoundary 0 21.56 31.11 7.33 19.18 12.22 11.47 18.90 14.13 33.16 23.53 24.74 129.94 106.49 76.40 6.18 34.78 33.94 42.78 28.80 41.48 87.97 99.87 53.01 64 ER9a ExonRegion 1 20.37 30.75 10.97 29.36 31.94 20.87 31.96 18.50 22.35 19.79 36.85 115.90 79.16 39.73 17.47 30.64 34.44 16.31 8.94 26.13 28.78 73.28 31.44 65 E9_Ab KnownBoundary 1 71.49 27.69 30.42 24.24 54.50 33.90 43.90 28.92 24.04 19.39 35.17 62.12 65.74 58.33 56.86 96.73 29.27 35.28 32.94 41.03 61.16 79.66 86.99 66 ER9b ExonRegion 0 218.48 282.48 376.40 229.87 212.56 216.18 203.98 249.78 246.01 374.30 772.82 840.27 913.22 792.11 1083.11 713.58 688.30 496.63 437.17 317.30 1025.26 891.53 579.57 67 E9_Da NovelBoundary 0 7.56 27.89 3.10 23.37 26.74 10.11 55.12 18.61 7.61 22.13 32.38 93.33 85.71 36.26 0.00 24.35 22.44 44.40 9.32 41.10 33.85 35.15 22.19 68 E9a_E10a KnownJunction 0 446.75 390.92 367.40 249.42 514.09 399.60 235.17 234.16 250.75 368.49 1070.90 669.97 861.79 969.10 1122.82 832.86 1088.64 534.83 477.85 375.96 1391.04 964.18 744.62 69 I9 Intron 0 39.86 48.09 25.83 40.71 51.09 25.33 35.27 28.16 21.13 30.64 24.01 67.81 63.55 24.96 22.05 17.95 17.01 13.47 10.25 26.38 10.28 63.79 14.75 70 I9_AR1 ActiveIntronRegion 0 9.23 25.26 7.96 29.76 28.30 18.58 18.37 11.31 18.71 20.51 18.10 64.45 81.65 26.03 12.31 15.84 13.84 9.65 5.79 25.89 6.65 58.44 10.75 71 I9_SR1 SilentIntronRegion 1 9.52 32.16 25.61 34.98 57.08 22.40 28.88 18.93 25.75 32.92 8.50 112.28 121.94 22.03 13.01 12.33 10.45 6.16 9.77 26.28 2.24 63.96 13.31 72 I9_AR2 ActiveIntronRegion 0 46.67 53.00 29.34 43.03 55.40 26.73 38.75 31.71 21.49 32.58 25.59 67.32 58.51 24.85 24.21 18.52 17.82 14.42 11.13 26.50 11.21 64.88 15.58 73 E10_Aa NovelBoundary 0 170.99 87.75 111.32 106.41 143.89 97.22 73.80 74.18 48.78 59.53 79.76 96.18 50.32 55.45 79.86 69.73 36.56 45.52 23.81 54.97 92.48 122.22 63.42 74 ER10a ExonRegion 0 314.27 291.37 378.39 305.27 350.77 241.33 252.70 284.64 260.17 377.98 639.88 548.45 714.98 647.90 855.03 524.65 496.47 369.98 294.86 259.75 557.41 700.61 413.45 75 E10_Da KnownBoundary 1 253.23 225.16 149.99 152.29 234.64 120.33 159.03 90.69 65.10 84.94 145.67 398.23 327.74 100.59 267.63 93.48 81.72 17.12 58.45 102.91 20.26 193.56 49.85 76 ER10b ExonRegion 1 103.99 94.36 69.93 82.77 112.56 56.11 64.08 39.06 33.02 34.94 82.21 310.28 234.81 73.95 238.10 45.57 42.47 11.09 33.98 51.21 12.49 122.23 27.80 77 ER10c ExonRegion 1 67.93 62.65 39.85 48.74 67.02 44.54 37.45 21.48 17.35 18.35 53.75 175.24 102.29 41.92 131.39 28.31 34.11 8.27 19.42 29.48 7.77 90.09 15.38 78 ER10d ExonRegion 0 8.47 18.30 3.68 2.73 8.03 3.67 1.32 0.00 2.47 3.44 7.73 12.99 4.69 0.00 2.90 0.00 0.00 0.00 0.00 0.00 2.20 4.17 2.94 79 ER10e ExonRegion 0 4.23 2.03 0.00 1.36 4.01 0.92 0.00 0.00 0.00 1.72 0.97 2.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00