Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CNTN3 Gene 0 1.50 13.15 0.31 1.16 2.64 5.35 0.33 8.51 2.31 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.50 0.95 0.59 24.70 98.33 45.70 2 263665 Transcript 0 0.21 3.59 0.09 0.63 1.00 3.00 0.06 3.83 1.38 0.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.60 1.28 0.82 32.57 61.91 54.31 3 477856 Transcript 0 1.33 17.69 0.57 0.01 1.27 3.51 0.00 7.36 1.63 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.73 0.68 15.06 36.19 13.00 4 ER1a ExonRegion 0 1.30 0.00 0.00 0.00 1.64 3.16 0.00 0.00 0.00 0.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.31 1.31 12.35 27.71 16.42 5 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.67 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.67 0.00 8.40 32.33 34.83 6 ER2a ExonRegion 0 0.00 0.61 0.00 0.82 0.00 2.53 0.00 1.91 0.50 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.08 0.45 18.79 71.22 40.86 7 E2a_E3a KnownJunction 0 0.00 2.89 0.00 0.00 0.00 0.00 0.00 9.04 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 22.43 70.42 50.11 8 ER3a ExonRegion 0 0.00 2.10 0.00 0.00 1.55 6.49 0.00 5.50 0.71 0.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.92 0.29 17.58 70.00 55.48 9 E3a_E4a KnownJunction 0 0.00 3.16 0.00 0.00 0.00 8.63 0.00 3.29 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.45 63.93 65.73 10 ER4a ExonRegion 0 0.00 2.86 0.00 0.00 0.00 3.27 0.00 2.45 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.17 0.07 0.00 27.02 53.06 47.78 11 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 30.52 62.83 38.67 12 ER5a ExonRegion 0 0.53 2.56 0.00 0.51 2.45 5.59 0.00 4.04 0.00 1.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.82 0.77 0.00 37.84 47.83 65.53 13 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 4.07 0.00 0.00 2.01 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37.31 42.43 83.40 14 ER6a ExonRegion 0 0.00 2.37 0.00 1.01 0.44 0.68 0.66 4.75 0.14 0.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.97 0.00 0.00 29.80 50.93 67.91 15 E6a_E7a KnownJunction 0 0.00 3.09 0.00 0.00 0.00 5.68 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 30.52 71.21 59.41 16 ER7a ExonRegion 0 0.00 2.09 0.00 0.56 1.48 3.13 0.00 2.25 3.08 0.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.24 0.00 0.59 28.71 54.25 38.38 17 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.81 3.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 47.82 36.56 43.45 18 ER8a ExonRegion 0 0.00 6.20 0.00 0.65 0.00 3.45 0.04 3.48 2.14 2.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.26 48.34 57.96 40.58 19 E8a_E9a KnownJunction 0 0.00 14.21 0.00 1.37 0.00 0.00 0.00 4.48 2.92 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 3.07 41.27 56.95 49.85 20 ER9a ExonRegion 0 0.00 7.48 0.00 0.12 1.05 0.72 0.48 4.75 1.19 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.43 0.00 1.39 40.79 67.55 61.99 21 E9a_E10a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 6.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.72 68.03 51.82 22 ER10a ExonRegion 0 0.00 7.66 0.00 0.69 0.90 4.63 0.00 3.16 0.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.06 1.44 30.88 59.76 58.52 23 E10a_E11a KnownJunction 0 0.00 2.76 0.00 0.00 0.00 10.90 0.00 3.20 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.08 73.73 95.52 24 ER11a ExonRegion 0 1.69 3.40 0.44 0.28 3.80 2.58 0.00 1.93 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.19 1.40 37.26 64.04 52.13 25 E11a_E12a KnownJunction 0 0.00 0.00 1.80 1.90 4.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.94 3.13 37.50 69.38 73.50 26 ER12a ExonRegion 0 0.00 3.85 0.74 0.98 2.36 5.32 0.00 2.24 2.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.57 1.74 45.21 74.11 57.83 27 E12a_E13a KnownJunction 0 0.00 3.35 0.00 0.00 4.33 2.38 0.00 0.00 3.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.53 3.26 33.67 96.69 61.97 28 ER13a ExonRegion 0 0.00 2.17 0.00 0.00 2.77 1.57 0.00 2.23 2.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.49 1.41 33.06 80.07 59.78 29 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.28 52.91 48.14 30 ER14a ExonRegion 0 0.68 2.19 0.00 0.00 0.00 1.58 0.00 1.65 1.20 0.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36.76 69.54 59.55 31 E14a_E15a KnownJunction 0 0.00 9.60 0.00 0.00 0.00 2.67 0.00 0.00 0.00 3.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.60 47.82 39.27 32 ER15a ExonRegion 0 0.00 5.91 0.00 0.00 0.00 5.18 0.00 8.96 1.24 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.94 1.08 0.00 38.08 58.74 51.43 33 E15_Da NovelBoundary 0 0.00 2.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.90 0.00 7.68 34 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.43 51.56 32.61 35 ER16a ExonRegion 0 0.00 0.60 0.00 0.00 0.00 2.63 0.00 7.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51.52 41.93 29.99 36 E16a_E17a KnownJunction 0 0.00 5.13 0.00 0.00 0.00 0.00 0.00 10.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42.75 49.48 51.64 37 ER17a ExonRegion 0 0.00 7.81 0.00 1.06 1.74 6.02 0.29 6.49 1.08 0.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.20 3.21 0.92 47.62 69.11 67.97 38 E17a_E18a KnownJunction 0 0.00 0.00 0.00 2.03 0.00 0.00 0.00 4.64 4.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 7.53 0.00 33.85 58.42 86.30 39 ER18a ExonRegion 0 0.93 2.66 0.00 1.84 1.18 5.55 0.00 5.60 4.29 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.40 0.96 0.46 31.74 65.85 67.42 40 E18a_E19a KnownJunction 0 0.00 0.00 0.00 5.06 0.00 0.00 0.00 6.90 5.70 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 3.26 36.39 45.50 82.12 41 ER19a ExonRegion 0 0.00 1.23 0.00 1.66 0.00 5.93 0.00 2.90 3.01 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.25 2.32 0.56 41.01 57.11 52.01 42 E19_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.07 0.00 0.00 9.33 7.59 3.93 43 E19a_E20b KnownJunction 0 0.00 2.76 0.00 2.06 0.00 7.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 34.10 69.81 46.35 44 I19 Intron 0 0.17 3.27 0.00 0.26 0.84 1.11 0.04 1.91 0.65 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.58 0.36 0.22 4.68 30.36 10.41 45 I19_AR1 ActiveIntronRegion 0 0.18 1.02 0.00 0.00 1.35 1.38 0.00 1.94 1.24 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.23 0.00 0.54 3.15 38.80 12.56 46 I19_SR2 SilentIntronRegion 0 0.00 3.96 0.00 0.00 0.00 0.25 0.00 0.73 0.51 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 0.00 0.00 9.80 22.41 8.31 47 I19_AR2 ActiveIntronRegion 0 0.46 10.94 0.00 1.10 1.75 1.92 0.00 5.20 1.80 0.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.90 0.35 0.46 9.50 58.69 16.09 48 I19_SR3 SilentIntronRegion 0 0.56 9.88 0.00 0.72 2.36 4.32 0.00 5.64 1.79 0.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 1.12 0.38 12.97 74.92 24.58 49 E20_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 11.07 0.00 2.34 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.69 0.00 0.00 13.34 94.24 48.23 50 ER20a ExonRegion 0 1.33 17.69 0.57 0.01 1.27 3.51 0.00 7.36 1.63 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.73 0.68 15.06 36.19 13.00 51 E20_Ab KnownBoundary 0 0.00 21.58 0.00 0.00 4.33 5.00 0.00 7.97 1.33 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.33 0.00 16.12 75.62 22.96 52 ER20b ExonRegion 0 0.96 20.08 0.00 1.42 0.93 6.96 0.00 4.66 3.23 2.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.51 39.65 102.24 61.91 53 E20a_E21a KnownJunction 0 0.00 14.34 0.00 0.00 3.23 2.56 0.00 6.65 2.49 3.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.39 101.83 94.67 54 ER21a ExonRegion 0 2.53 13.93 0.00 1.34 3.75 10.41 0.00 9.79 2.64 0.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.02 1.94 0.00 31.96 132.21 66.26 55 E21a_E22a KnownJunction 0 6.08 43.28 0.00 1.53 0.00 12.55 0.00 17.42 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 33.30 147.02 98.77 56 ER22a ExonRegion 0 4.23 23.29 0.00 1.11 1.28 11.03 0.00 10.78 2.13 0.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.25 1.96 0.00 32.40 134.66 68.80 57 E22_Da KnownBoundary 0 10.89 19.54 0.00 2.06 0.00 16.58 0.00 13.18 5.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 4.80 0.00 26.13 147.57 35.85 58 ER22b ExonRegion 0 3.17 25.93 0.72 2.08 5.03 6.60 0.82 15.60 3.56 2.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.24 0.59 0.60 7.67 153.73 31.72