Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CLDND1	Gene	0	323.03	652.36	240.05	297.61	357.68	305.16	237.73	243.55	344.08	363.96	315.25	530.66	401.40	346.14	310.82	364.61	252.10	169.41	139.95	194.01	80.96	629.88	281.45
2	450069	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	394185	Transcript	0	0.00	0.00	0.00	1.83	23.60	0.00	1.81	0.00	1.59	15.96	17.43	0.00	0.00	2.47	4.45	40.33	14.31	37.60	4.24	0.00	0.00	5.76	3.33
4	437922	Transcript	0	0.00	28.02	0.00	1.80	19.52	21.69	4.15	14.13	25.49	4.06	0.00	0.00	6.82	2.30	0.00	0.00	0.00	15.67	16.85	15.02	0.00	24.49	11.69
5	448209	Transcript	0	3.19	19.21	7.45	7.29	3.48	14.20	14.75	8.26	4.72	7.17	12.42	0.00	0.00	17.25	14.22	16.41	35.34	10.94	4.80	8.82	0.00	14.21	29.19
6	341181	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	394181	Transcript	0	0.91	2.29	0.53	0.17	1.70	2.34	1.57	1.23	3.79	2.67	12.38	1.37	0.35	16.74	2.76	6.97	13.33	5.71	2.27	4.29	7.03	3.84	4.91
8	394180	Transcript	0	13.18	47.63	6.40	5.44	51.43	50.70	15.30	15.33	98.88	11.68	1.69	4.06	7.81	7.11	10.28	5.76	10.07	90.98	22.93	83.07	19.59	50.36	42.55
9	IG17	Intergenic	0	0.19	0.09	0.04	0.04	0.04	0.00	0.13	0.04	0.23	0.02	19.25	254.71	176.50	180.07	64.40	37.78	49.71	0.00	0.09	0.03	0.02	0.00	0.00
10	IG17_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	1.23	0.00	0.61	0.00	0.00	0.00	125.34	221.89	144.63	290.02	72.03	71.81	101.52	0.00	0.00	0.00	0.00	0.00	0.00
11	IG17_SR4	SilentIntergenicRegion	0	0.12	0.04	0.04	0.06	0.00	0.00	0.13	0.05	0.27	0.00	17.24	298.38	213.84	191.89	48.90	36.95	48.87	0.00	0.00	0.00	0.00	0.00	0.00
12	IG17_AR2	ActiveIntergenicRegion	0	0.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.44	0.00	25.88	216.40	107.20	196.94	137.24	72.63	83.67	0.00	0.00	0.00	0.00	0.00	0.00
13	IG17_SR3	SilentIntergenicRegion	0	0.14	0.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	21.31	72.40	45.32	167.79	102.01	53.35	43.38	0.00	0.00	0.00	0.00	0.00	0.00
14	IG17_AR1	ActiveIntergenicRegion	0	0.99	0.33	0.00	0.00	0.44	0.00	0.00	0.00	0.00	0.56	41.37	171.35	128.60	228.94	209.63	65.96	75.08	0.00	2.10	0.00	0.36	0.00	0.00
15	IG17_SR2	SilentIntergenicRegion	0	0.12	0.23	0.10	0.00	0.00	0.00	0.22	0.00	0.10	0.00	10.02	123.27	64.57	107.67	74.42	17.27	31.39	0.00	0.00	0.24	0.00	0.00	0.00
16	IG17_SR1	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.04	32.82	18.36	21.16	8.92	2.92	14.50	0.00	0.00	0.00	0.00	0.00	0.00
17	ER1a	ExonRegion	1	66.25	121.04	22.29	32.37	98.79	211.16	107.03	23.10	40.65	45.14	88.82	14.28	55.68	117.77	74.46	174.52	111.55	77.98	47.62	57.03	55.76	170.05	216.89
18	E1_Da	KnownBoundary	0	3.04	12.17	2.93	0.00	20.71	42.02	23.94	4.35	17.33	12.25	18.79	6.15	0.00	30.73	4.45	25.21	13.56	49.87	17.32	21.22	12.23	8.02	12.04
19	E1a_E2a	KnownJunction	0	18.15	52.56	6.68	3.90	56.71	46.85	18.02	13.80	99.42	11.04	0.00	0.00	6.82	0.00	5.69	0.00	12.72	90.95	21.18	81.56	21.56	50.46	42.51
20	E1a_E2b	KnownJunction	0	0.00	28.02	0.00	1.80	19.52	21.69	4.15	14.13	25.49	4.06	0.00	0.00	6.82	2.30	0.00	0.00	0.00	15.67	16.85	15.02	0.00	24.49	11.69
21	E1a_E3a	KnownJunction	1	592.40	977.72	158.36	247.29	646.94	1160.41	726.83	150.78	196.67	338.46	595.47	51.92	169.63	638.30	527.72	1122.18	616.83	445.46	358.88	332.50	177.42	893.70	1138.57
22	E1a_E3b	KnownJunction	0	3.19	19.21	7.45	7.29	3.48	14.20	14.75	8.26	4.72	7.17	12.42	0.00	0.00	17.25	14.22	16.41	35.34	10.94	4.80	8.82	0.00	14.21	29.19
23	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	1.83	23.60	0.00	1.81	0.00	1.59	15.96	17.43	0.00	0.00	2.47	4.45	40.33	14.31	37.60	4.24	0.00	0.00	5.76	3.33
24	ER1b	ExonRegion	0	1.83	4.58	1.06	0.34	3.39	4.68	3.13	2.46	7.57	5.35	14.45	2.74	0.70	26.71	5.52	13.94	11.99	11.42	4.54	8.58	11.72	5.35	9.81
25	E1b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.32	0.00	0.00	6.77	0.00	0.00	14.68	0.00	0.00	0.00	2.35	2.33	0.00
26	I1	Intron	1	4.38	21.29	4.45	4.82	25.24	23.21	12.09	20.69	49.96	22.88	47.88	52.28	37.36	71.37	13.85	56.80	63.89	38.92	19.97	35.22	17.57	19.78	16.98
27	I1_AR1	ActiveIntronRegion	1	4.39	21.34	4.46	4.83	25.30	23.27	12.11	20.74	50.08	22.94	47.99	52.40	37.45	71.54	13.88	56.94	64.04	39.01	20.02	35.30	17.61	19.83	17.02
28	E2_Ab	NovelBoundary	0	3.78	23.81	9.40	7.52	33.02	40.49	10.55	19.84	95.60	25.04	24.53	18.46	6.82	20.78	8.90	18.46	40.11	57.41	22.12	70.82	8.59	24.74	21.00
29	ER2a	ExonRegion	0	8.20	42.71	6.13	6.98	46.16	54.56	12.58	16.85	98.35	12.33	3.38	8.12	8.79	14.21	14.87	11.52	7.43	91.00	24.69	84.57	17.63	50.26	42.58
30	ER2b	ExonRegion	0	6.10	53.39	4.59	12.42	37.15	47.98	14.38	39.79	123.40	21.66	6.11	10.37	12.87	28.89	17.68	11.82	11.05	80.05	26.45	76.05	11.17	38.76	23.29
31	E2a_E3a	KnownJunction	0	2.82	52.75	1.30	16.02	24.02	15.73	7.38	41.90	90.80	23.58	4.42	6.00	13.15	7.24	19.66	0.00	17.30	45.06	16.00	45.25	7.23	13.78	7.43
32	ER3a	ExonRegion	1	416.25	760.90	141.73	218.52	556.56	955.10	545.91	192.15	291.69	314.06	586.96	62.78	187.60	640.99	431.80	1058.08	568.30	510.90	338.71	331.20	178.13	776.11	998.95
33	ER3b	ExonRegion	0	120.57	331.17	167.13	229.71	303.13	420.18	237.64	214.90	429.58	355.32	466.42	490.53	302.48	498.09	291.00	612.91	409.06	369.59	216.41	293.39	144.79	632.65	532.37
34	E3a_E4a	KnownJunction	0	157.81	652.71	232.66	311.02	383.70	593.35	429.88	239.01	404.51	434.98	400.89	721.59	328.71	445.17	297.92	486.54	334.08	246.07	252.34	295.87	163.15	729.41	283.49
35	I3	Intron	0	10.79	27.78	9.30	8.87	27.39	21.91	22.51	15.55	25.38	20.79	36.58	115.25	73.53	64.30	9.99	43.27	42.55	14.19	8.73	23.78	5.94	29.26	19.75
36	I3_AR1	ActiveIntronRegion	0	8.24	25.80	8.34	7.36	22.23	17.51	19.09	14.02	22.48	20.51	30.33	118.00	81.89	57.78	9.05	31.51	30.78	10.62	6.72	20.04	2.19	28.24	14.97
37	I3_SR1	SilentIntronRegion	0	10.58	25.45	13.78	6.61	24.34	19.07	22.13	18.88	34.87	20.27	36.21	124.94	84.13	55.56	16.74	23.86	45.37	11.05	6.54	31.73	2.61	30.46	20.61
38	I3_AR2	ActiveIntronRegion	1	17.80	34.21	10.24	13.88	42.67	35.02	32.02	18.51	29.68	21.86	53.86	104.84	47.32	85.70	9.96	82.83	73.47	25.16	15.07	30.96	17.37	31.77	32.43
39	ER4a	ExonRegion	0	303.58	605.16	198.38	313.01	250.15	278.37	203.77	238.84	428.41	439.39	524.86	753.05	331.60	584.26	392.24	565.75	422.28	358.75	214.77	289.49	187.22	801.97	416.53
40	E4a_E5a	KnownJunction	1	576.84	618.11	208.63	329.93	249.75	223.17	185.79	270.39	418.89	469.79	489.12	757.60	217.84	580.50	324.74	512.26	341.56	338.30	188.62	327.51	176.25	852.74	421.95
41	I4	Intron	0	58.82	56.73	21.19	24.44	86.90	38.08	45.95	37.30	36.25	32.76	51.04	156.95	100.34	77.15	38.21	86.07	55.19	17.74	14.24	34.66	5.40	62.78	21.88
42	I4_AR1	ActiveIntronRegion	1	14.82	7.15	1.07	1.19	21.96	13.97	14.73	3.02	6.47	5.01	38.50	103.26	40.92	75.64	16.61	41.78	34.79	8.11	5.60	22.45	2.56	46.41	10.33
43	I4_SR2	SilentIntronRegion	0	26.41	31.44	11.39	25.34	55.18	29.36	35.56	27.95	36.45	29.20	23.60	171.41	107.17	66.66	32.08	58.86	42.12	9.01	11.23	35.21	3.59	53.13	16.73
44	I4_AR2	ActiveIntronRegion	0	108.47	102.18	39.18	33.84	145.25	56.95	69.53	61.12	49.26	48.32	82.46	168.14	120.55	88.31	53.60	131.29	76.67	30.18	20.91	39.74	8.35	79.43	31.85
45	E5_Aa	NovelBoundary	0	125.50	179.84	62.24	32.66	125.04	81.66	54.94	65.68	62.79	75.91	89.29	210.07	197.71	152.28	37.21	120.99	153.90	41.91	7.25	66.54	24.77	71.64	63.68
46	ER5a	ExonRegion	0	319.62	699.58	218.72	315.25	426.30	470.25	277.73	252.53	424.83	418.90	534.59	723.77	333.81	591.19	421.86	687.06	475.76	394.79	238.53	271.94	203.01	693.31	443.90
47	E5_Da	NovelBoundary	0	104.98	126.03	38.67	59.60	39.98	48.72	74.63	61.86	60.21	40.08	165.41	133.09	114.60	105.77	47.84	169.61	188.97	37.64	48.38	50.43	17.79	67.66	32.10
48	E5a_E6a	KnownJunction	0	162.18	594.24	196.09	259.67	622.41	594.60	293.20	180.23	372.07	411.04	365.57	424.34	171.90	417.27	346.38	448.51	303.41	360.85	178.92	236.30	213.69	443.09	327.97
49	I5	Intron	0	120.51	89.84	39.53	30.11	119.01	32.08	38.08	38.21	45.85	26.35	120.37	109.19	106.92	131.56	77.83	155.10	97.88	33.25	34.00	32.19	16.99	54.98	47.02
50	I5_AR1	ActiveIntronRegion	1	121.90	90.87	39.98	30.46	120.39	32.46	38.52	38.65	46.37	26.66	121.75	110.32	108.15	133.09	78.71	156.93	98.97	33.64	34.40	32.53	17.19	55.63	47.56
51	E6_Aa	NovelBoundary	0	119.72	136.82	66.85	62.00	241.34	189.15	98.70	46.66	36.40	38.25	122.66	93.78	108.92	104.01	73.06	158.51	50.12	48.00	17.88	46.34	27.92	56.76	44.22
52	ER6a	ExonRegion	0	181.21	565.96	182.30	257.64	528.97	465.71	273.86	222.44	391.20	391.89	461.59	373.50	237.03	486.74	366.12	621.97	407.91	445.38	167.35	264.07	192.66	497.40	470.54
53	ER6b	ExonRegion	0	211.02	577.13	233.19	284.57	505.72	409.85	297.36	269.64	445.26	412.89	530.77	424.29	395.84	595.24	408.50	867.27	507.68	504.62	225.21	318.30	190.62	597.14	665.44
54	ER6c	ExonRegion	0	497.59	976.48	360.29	430.32	498.85	350.35	315.69	346.64	440.79	497.45	352.05	727.76	599.20	382.48	412.09	371.11	259.91	130.99	154.26	221.22	64.63	846.10	269.57
55	IG16	Intergenic	0	9.32	2.59	1.26	2.69	8.31	1.90	2.30	2.05	6.10	2.90	10.12	21.21	14.88	16.94	5.33	10.63	10.11	3.34	0.52	2.23	1.13	4.56	1.95
56	IG16_AR7	ActiveIntergenicRegion	0	3.09	1.32	1.57	2.98	4.61	2.25	2.91	1.48	2.30	2.87	8.64	30.50	14.89	15.39	3.11	6.45	9.10	1.49	0.00	3.14	0.32	3.85	4.38
57	IG16_SR5	SilentIntergenicRegion	0	7.67	2.28	0.00	2.66	0.00	3.02	1.60	1.23	2.62	0.76	11.85	48.88	9.95	17.62	4.69	4.94	15.24	1.47	1.52	3.48	0.00	2.12	2.25
58	IG16_AR6	ActiveIntergenicRegion	0	10.97	4.62	0.00	0.25	0.00	0.00	0.96	0.00	3.71	2.29	17.22	62.19	18.76	23.48	4.75	9.73	8.70	1.85	0.00	7.35	1.40	1.33	0.00
59	IG16_SR4	SilentIntergenicRegion	0	6.60	2.22	0.53	2.43	4.93	1.73	2.44	1.83	4.76	2.74	10.38	23.91	18.86	18.77	5.03	13.21	12.17	4.12	0.78	3.13	1.64	3.34	1.96
60	IG16_AR5	ActiveIntergenicRegion	0	10.08	4.16	2.21	2.74	9.38	1.61	3.12	1.37	6.89	3.03	11.58	24.34	18.07	21.69	6.27	9.87	12.06	2.21	1.45	0.51	0.75	2.38	2.68
61	IG16_SR3	SilentIntergenicRegion	0	22.20	2.69	0.81	0.67	15.95	2.23	3.95	1.42	5.28	3.02	13.23	23.10	14.28	21.47	5.75	16.40	13.12	3.15	0.70	4.23	2.92	4.84	1.95
62	IG16_AR4	ActiveIntergenicRegion	0	12.56	3.16	2.32	4.88	10.58	0.52	1.68	2.55	5.46	0.72	10.65	22.81	11.69	21.62	7.02	15.12	10.73	2.98	0.00	1.80	1.24	3.83	4.56
63	IG16_SR2	SilentIntergenicRegion	0	9.42	1.09	1.60	2.95	13.93	3.42	2.68	2.83	6.90	2.95	13.24	21.45	16.97	21.09	5.99	12.00	9.65	4.14	0.40	2.12	0.93	5.90	1.84
64	IG16_AR3	ActiveIntergenicRegion	0	20.39	2.49	4.72	4.78	14.68	0.49	1.91	2.01	16.57	7.11	11.43	16.50	5.01	16.13	9.72	16.61	15.63	5.67	0.49	1.45	1.92	10.51	2.91
65	IG16_AR2	ActiveIntergenicRegion	0	38.03	16.43	6.49	9.79	18.99	1.66	3.05	4.83	21.99	9.59	13.37	35.98	18.76	20.49	16.20	11.26	13.91	4.20	0.52	1.99	1.27	18.44	3.87