Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CCDC72 Gene 0 212.48 253.73 230.42 160.94 168.80 85.49 114.27 127.62 76.91 91.47 341.78 134.45 63.32 171.87 383.22 231.90 307.25 92.41 249.42 136.67 180.60 184.43 102.38 2 479126 Transcript 0 5.87 9.87 13.35 10.33 5.38 3.05 7.00 10.60 5.49 7.60 21.31 3.13 2.20 5.64 9.75 13.21 15.47 6.90 17.96 5.36 8.97 8.56 6.58 3 438607 Transcript 0 4.23 8.13 2.45 6.81 2.68 1.83 3.97 1.73 1.24 0.00 3.87 0.00 0.00 0.00 0.00 2.97 6.60 0.00 0.00 4.26 0.00 0.00 0.00 4 477624 Transcript 1 47.47 77.76 26.59 14.29 23.75 16.44 36.18 12.12 9.71 16.10 47.19 0.00 1.69 37.03 106.27 50.13 36.20 28.09 58.98 32.20 16.24 13.55 22.50 5 482214 Transcript 0 41.14 23.89 16.21 18.83 27.19 17.34 26.05 17.84 8.20 9.39 17.52 14.09 18.61 24.70 28.68 24.98 19.58 12.01 21.42 18.71 12.54 14.43 11.42 6 ER1a ExonRegion 1 418.31 524.95 172.69 80.65 270.25 184.10 243.80 73.58 48.61 67.18 576.63 6.18 34.34 203.71 986.94 361.33 1069.61 82.42 358.69 86.93 636.87 310.00 162.98 7 E1a_E1c NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.13 0.00 0.00 8 E1a_E1d KnownJunction 1 3749.18 4981.35 1468.75 912.24 1708.41 1173.76 1491.90 791.62 475.72 587.58 5111.93 31.51 72.07 1894.00 5502.95 3029.97 5456.38 1080.94 2657.77 1211.81 3214.77 1739.52 1420.78 9 ER1b ExonRegion 1 2050.45 2770.32 806.12 445.27 1037.14 750.94 912.97 397.05 255.14 343.21 3230.91 21.03 82.41 1316.23 4485.85 1892.40 3942.21 538.55 1668.68 680.32 2401.65 1216.11 870.19 10 ER1c ExonRegion 0 47.47 77.76 26.59 14.29 23.75 16.44 36.18 12.12 9.71 16.10 47.19 0.00 1.69 37.03 106.27 50.13 36.20 28.09 58.98 32.20 16.24 13.55 22.50 11 E1_Ac KnownBoundary 0 14.82 32.76 17.74 12.52 4.16 2.61 0.00 12.65 1.22 8.60 8.48 0.00 7.95 2.24 9.89 11.02 0.00 11.81 23.91 9.08 0.00 2.39 8.37 12 E1_Ad KnownBoundary 0 9.56 16.25 14.19 8.82 0.00 5.34 0.00 8.34 4.43 5.75 2.11 0.00 0.00 2.47 0.00 7.86 0.00 11.03 4.71 0.00 8.15 0.00 0.00 13 ER1d ExonRegion 1 1513.31 1912.58 545.90 316.19 670.27 464.87 590.49 294.70 182.18 239.70 2192.87 12.99 42.21 791.76 2273.13 1252.75 2327.13 380.64 1135.58 501.06 1431.31 714.65 575.58 14 ER1e ExonRegion 1 2006.00 2317.36 1084.45 692.99 871.61 537.04 922.01 641.16 402.06 489.02 3113.30 113.20 71.37 910.78 2180.63 1627.43 2337.87 672.14 2119.89 799.80 1473.96 947.74 776.07 15 E1_Db KnownBoundary 0 0.00 0.00 6.83 0.00 0.00 4.20 5.65 2.09 4.72 1.29 5.26 0.00 0.00 2.47 4.45 11.71 17.67 4.02 4.80 0.00 0.00 0.00 0.00 16 E1b_E1e KnownJunction 0 261.53 240.62 595.07 397.45 257.22 149.69 260.74 422.65 252.69 269.21 562.93 216.52 120.93 223.68 519.69 353.33 339.69 228.95 548.35 193.67 245.19 340.83 129.24 17 ER1f ExonRegion 0 5.87 9.87 13.35 10.33 5.38 3.05 7.00 10.60 5.49 7.60 21.31 3.13 2.20 5.64 9.75 13.21 15.47 6.90 17.96 5.36 8.97 8.56 6.58 18 E1_Ae KnownBoundary 0 0.00 15.72 12.51 17.25 4.33 2.21 4.50 17.17 5.06 6.93 22.22 0.00 7.14 4.59 8.90 12.13 17.39 4.89 0.00 6.26 10.56 5.76 3.50 19 ER1g ExonRegion 1 339.66 270.96 1016.35 498.55 168.08 107.92 128.76 539.87 332.03 414.92 2064.78 679.33 188.84 655.94 1361.59 445.10 2611.77 313.29 746.44 501.73 1607.47 468.31 204.25 20 E1_Dc KnownBoundary 0 0.00 0.00 2.96 3.26 3.57 4.83 3.75 2.09 1.71 5.43 2.37 0.00 0.00 5.42 0.00 0.00 8.23 8.25 0.00 0.00 2.90 3.00 8.62 21 E1c_E2b KnownJunction 1 346.51 302.31 2306.19 1287.55 168.25 79.67 90.62 1317.90 762.41 874.71 4408.59 1096.41 266.70 1671.38 3396.88 1599.07 3749.13 1106.76 2219.17 1446.32 2372.13 1639.22 919.36 22 ER1h ExonRegion 0 9.92 9.14 17.12 11.88 10.47 18.39 13.63 14.90 8.99 8.05 16.14 5.33 5.93 24.40 25.25 22.42 17.34 8.58 6.49 13.54 7.83 7.05 7.93 23 E1_Dd KnownBoundary 0 212.04 203.85 173.15 200.47 132.51 154.46 290.06 182.98 147.63 187.28 101.82 96.93 93.01 92.53 109.77 285.99 230.29 165.98 88.19 211.05 97.55 71.89 158.09 24 ER1i ExonRegion 0 50.04 32.63 20.69 22.73 32.12 20.51 35.40 17.39 12.32 12.35 23.45 22.10 27.48 33.46 36.23 40.58 25.58 17.22 20.73 20.30 14.11 19.00 16.03 25 E1_De NovelBoundary 0 30.15 49.27 24.54 30.03 19.02 17.89 31.66 8.13 10.91 7.20 12.58 11.70 27.76 25.02 18.67 29.74 31.79 16.95 12.61 8.25 5.37 2.57 11.35 26 E1e_E2a KnownJunction 0 17.63 2.57 2.45 5.49 20.29 21.58 18.50 4.64 1.30 0.00 2.00 0.00 6.49 0.00 4.82 3.50 3.65 4.85 18.35 12.78 4.82 4.78 0.00 27 Ix Intron 0 25.51 23.38 14.90 12.05 52.60 34.69 29.71 11.94 5.46 12.04 22.94 22.95 32.34 35.26 27.50 33.62 22.04 8.17 14.18 6.71 7.35 11.98 16.34 28 Ix_SR2 SilentIntronRegion 0 25.61 23.47 14.95 12.10 52.79 34.82 29.82 11.99 5.48 12.09 23.03 23.04 32.45 35.39 27.60 33.75 22.12 8.20 14.23 6.73 7.38 12.02 16.40 29 E2_Aa NovelBoundary 0 23.12 26.44 45.59 45.82 8.66 8.01 25.00 33.11 38.43 29.39 9.95 5.85 13.15 27.72 43.39 15.81 8.70 40.87 4.42 6.26 15.26 5.20 7.68 30 ER2a ExonRegion 0 55.74 36.46 25.50 28.25 29.17 9.93 24.25 31.48 10.97 15.81 27.11 20.18 21.87 40.65 44.98 30.85 29.53 13.95 25.17 23.06 18.70 19.53 18.23 31 E2_Ab KnownBoundary 0 48.30 20.52 20.84 45.45 83.45 10.79 34.23 40.54 9.37 17.65 31.48 20.86 5.84 29.73 8.90 20.17 16.46 9.99 4.80 37.90 4.63 5.08 8.62 32 ER2b ExonRegion 0 733.31 1007.86 1086.20 796.41 816.45 348.99 416.95 560.04 336.90 394.60 1091.24 712.04 286.36 657.81 1500.18 972.47 719.22 365.83 1050.02 587.91 386.92 885.77 416.61 33 ER2c ExonRegion 0 48.15 53.38 14.09 22.83 28.76 18.34 16.22 23.33 8.03 12.04 16.91 27.06 9.38 13.81 16.68 9.66 18.98 2.31 2.39 20.21 2.20 9.38 1.47 34 ER2d ExonRegion 0 4.23 8.13 2.45 6.81 2.68 1.83 3.97 1.73 1.24 0.00 3.87 0.00 0.00 0.00 0.00 2.97 6.60 0.00 0.00 4.26 0.00 0.00 0.00